RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 SRCIN1Q9C0H9 1055 aa9.12□□□□□ -0.95
SHROOM3-206ENST00000484236 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.12□□□□□ -0.95
SHROOM3-206ENST00000484236 CHMP5Q9NZZ3 219 aa9.12□□□□□ -0.95
SHROOM3-206ENST00000484236 CIZ1Q9ULV3 898 aaPredicted RBP9.12□□□□□ -0.95
SHROOM3-206ENST00000484236 TMEM94Q12767 1356 aa9.12□□□□□ -0.95
SHROOM3-206ENST00000484236 ERBB3P21860 1342 aa9.11□□□□□ -0.95
SHROOM3-206ENST00000484236 AOX1Q06278 1338 aa9.11□□□□□ -0.95
SHROOM3-206ENST00000484236 RAB11FIP3O75154 756 aa9.11□□□□□ -0.95
SHROOM3-206ENST00000484236 IL27Q8NEV9 243 aa9.11□□□□□ -0.95
SHROOM3-206ENST00000484236 LRRC59Q96AG4 307 aaKnown RBP9.11□□□□□ -0.95
SHROOM3-206ENST00000484236 LRRCC1Q9C099 1032 aa9.11□□□□□ -0.95
SHROOM3-206ENST00000484236 LGR6Q9HBX8 967 aa9.11□□□□□ -0.95
SHROOM3-206ENST00000484236 DBF4Q9UBU7 674 aaPredicted RBP9.11□□□□□ -0.95
SHROOM3-206ENST00000484236 TNS3Q68CZ2 1445 aa9.11□□□□□ -0.95
SHROOM3-206ENST00000484236 PXDNQ92626 1479 aa9.1□□□□□ -0.95
SHROOM3-206ENST00000484236 ZBTB7CA1YPR0 619 aa9.1□□□□□ -0.95
SHROOM3-206ENST00000484236 FRAT2O75474 233 aaPredicted RBP9.1□□□□□ -0.95
SHROOM3-206ENST00000484236 REC8O95072 547 aa9.1□□□□□ -0.95
SHROOM3-206ENST00000484236 UBTFL1P0CB47 393 aaPredicted RBP9.1□□□□□ -0.95
SHROOM3-206ENST00000484236 GSE1Q14687 1217 aa9.1□□□□□ -0.95
SHROOM3-206ENST00000484236 RABEP1Q15276 862 aa9.1□□□□□ -0.95
SHROOM3-206ENST00000484236 LMOD2Q6P5Q4 547 aa9.1□□□□□ -0.95
SHROOM3-206ENST00000484236 SSH3Q8TE77 659 aa9.1□□□□□ -0.95
SHROOM3-206ENST00000484236 USP44Q9H0E7 712 aa9.1□□□□□ -0.95
SHROOM3-206ENST00000484236 SLKQ9H2G2 1235 aaPredicted RBP9.1□□□□□ -0.95
SHROOM3-206ENST00000484236 DNAJC5Q9H3Z4 198 aa9.1□□□□□ -0.95
SHROOM3-206ENST00000484236 SALL3Q9BXA9 1300 aa9.09□□□□□ -0.95
SHROOM3-206ENST00000484236 PKD1L3Q7Z443 1732 aa9.09□□□□□ -0.95
SHROOM3-206ENST00000484236 EPB41L2O43491 1005 aaKnown RBP9.09□□□□□ -0.95
SHROOM3-206ENST00000484236 ALDH1L1O75891 902 aa9.09□□□□□ -0.95
SHROOM3-206ENST00000484236 ATXN8OSP0DMR3 200 aa9.09□□□□□ -0.95
SHROOM3-206ENST00000484236 SDSP20132 328 aa9.09□□□□□ -0.95
SHROOM3-206ENST00000484236 PDE1AP54750 535 aa9.09□□□□□ -0.95
SHROOM3-206ENST00000484236 XPCQ01831 940 aaPredicted RBP9.09□□□□□ -0.95
SHROOM3-206ENST00000484236 HSP90AB4PQ58FF6 505 aa9.09□□□□□ -0.95
SHROOM3-206ENST00000484236 MPRIPQ6WCQ1 1025 aa9.09□□□□□ -0.95
SHROOM3-206ENST00000484236 C16orf71Q8IYS4 520 aaPredicted RBP9.09□□□□□ -0.95
SHROOM3-206ENST00000484236 DNAAF4Q8WXU2 420 aa9.09□□□□□ -0.95
SHROOM3-206ENST00000484236 KIF2CQ99661 725 aa9.09□□□□□ -0.95
SHROOM3-206ENST00000484236 STAP2Q9UGK3 403 aa9.09□□□□□ -0.95
SHROOM3-206ENST00000484236 SPG7Q9UQ90 795 aa9.09□□□□□ -0.95
SHROOM3-206ENST00000484236 LRRFIP2Q9Y608 721 aaKnown RBP9.09□□□□□ -0.95
SHROOM3-206ENST00000484236 CPDO75976 1380 aa9.09□□□□□ -0.95
SHROOM3-206ENST00000484236 PARP4Q9UKK3 1724 aaKnown RBP9.08□□□□□ -0.96
SHROOM3-206ENST00000484236 ERC2O15083 957 aa9.08□□□□□ -0.96
SHROOM3-206ENST00000484236 GIGYF1O75420 1035 aaPredicted RBP9.08□□□□□ -0.96
SHROOM3-206ENST00000484236 TATP17735 454 aaPredicted RBP9.08□□□□□ -0.96
SHROOM3-206ENST00000484236 EIF2S2P20042 333 aaKnown RBP9.08□□□□□ -0.96
SHROOM3-206ENST00000484236 BEND3Q5T5X7 828 aa9.08□□□□□ -0.96
SHROOM3-206ENST00000484236 RAPGEF4Q8WZA2 1011 aa9.08□□□□□ -0.96
SHROOM3-206ENST00000484236 NECTIN2Q92692 538 aa9.08□□□□□ -0.96
SHROOM3-206ENST00000484236 USP26Q9BXU7 913 aa9.08□□□□□ -0.96
SHROOM3-206ENST00000484236 HYPKQ9NX55 129 aa9.08□□□□□ -0.96
SHROOM3-206ENST00000484236 CHPF2Q9P2E5 772 aa9.08□□□□□ -0.96
SHROOM3-206ENST00000484236 AXIN2Q9Y2T1 843 aa9.08□□□□□ -0.96
SHROOM3-206ENST00000484236 MRC1P22897 1456 aa9.08□□□□□ -0.96
SHROOM3-206ENST00000484236 XIRP1Q702N8 1843 aaKnown RBP9.08□□□□□ -0.96
SHROOM3-206ENST00000484236 K7ELQ4 463 aaPredicted RBP9.07□□□□□ -0.96
SHROOM3-206ENST00000484236 SMARCA5O60264 1052 aaPredicted RBP9.07□□□□□ -0.96
SHROOM3-206ENST00000484236 DDX58O95786 925 aaKnown RBP9.07□□□□□ -0.96
SHROOM3-206ENST00000484236 HSP90AB1P08238 724 aaKnown RBP9.07□□□□□ -0.96
SHROOM3-206ENST00000484236 MX1P20591 662 aa9.07□□□□□ -0.96
SHROOM3-206ENST00000484236 PTMSP20962 102 aa9.07□□□□□ -0.96
SHROOM3-206ENST00000484236 DDIT3P35638 169 aa9.07□□□□□ -0.96
SHROOM3-206ENST00000484236 MTX1Q13505 466 aa9.07□□□□□ -0.96
SHROOM3-206ENST00000484236 KSR2Q6VAB6 950 aa9.07□□□□□ -0.96
SHROOM3-206ENST00000484236 OTUD7AQ8TE49 926 aaPredicted RBP9.07□□□□□ -0.96
SHROOM3-206ENST00000484236 PHAXQ9H814 394 aaKnown RBP9.07□□□□□ -0.96
SHROOM3-206ENST00000484236 AK9Q5TCS8 1911 aa9.07□□□□□ -0.96
SHROOM3-206ENST00000484236 SPATA31A3Q5VYP0 1347 aa9.06□□□□□ -0.96
SHROOM3-206ENST00000484236 PNMA6EA0A0J9YXQ4 647 aa9.06□□□□□ -0.96
SHROOM3-206ENST00000484236 PI4KAP2A4QPH2 592 aa9.06□□□□□ -0.96
SHROOM3-206ENST00000484236 KCNQ3O43525 872 aa9.06□□□□□ -0.96
SHROOM3-206ENST00000484236 IFNL2Q8IZJ0 200 aa9.06□□□□□ -0.96
SHROOM3-206ENST00000484236 PI4KAP1Q8N8J0 262 aa9.06□□□□□ -0.96
SHROOM3-206ENST00000484236 KIF1BPQ96EK5 621 aa9.06□□□□□ -0.96
SHROOM3-206ENST00000484236 DDX21Q9NR30 783 aaKnown RBP eCLIP9.06□□□□□ -0.96
SHROOM3-206ENST00000484236 EXOC6BQ9Y2D4 811 aa9.06□□□□□ -0.96
SHROOM3-206ENST00000484236 ADCY9O60503 1353 aa9.06□□□□□ -0.96
SHROOM3-206ENST00000484236 DDX11L8A8MPP1 907 aa9.05□□□□□ -0.96
SHROOM3-206ENST00000484236 APBB1O00213 710 aa9.05□□□□□ -0.96
SHROOM3-206ENST00000484236 PHKG2P15735 406 aa9.05□□□□□ -0.96
SHROOM3-206ENST00000484236 ZC3H6P61129 1189 aaKnown RBP9.05□□□□□ -0.96
SHROOM3-206ENST00000484236 PPP1R42Q7Z4L9 355 aa9.05□□□□□ -0.96
SHROOM3-206ENST00000484236 FAM163AQ96GL9 167 aaPredicted RBP9.05□□□□□ -0.96
SHROOM3-206ENST00000484236 DCAF5Q96JK2 942 aa9.05□□□□□ -0.96
SHROOM3-206ENST00000484236 SLC52A2Q9HAB3 445 aa9.05□□□□□ -0.96
SHROOM3-206ENST00000484236 KDM6AO15550 1401 aaPredicted RBP9.05□□□□□ -0.96
SHROOM3-206ENST00000484236 UTYO14607 1347 aa9.05□□□□□ -0.96
SHROOM3-206ENST00000484236 LAMB4A4D0S4 1761 aa9.04□□□□□ -0.96
SHROOM3-206ENST00000484236 C5P01031 1676 aa9.04□□□□□ -0.96
SHROOM3-206ENST00000484236 ST18O60284 1047 aa9.04□□□□□ -0.96
SHROOM3-206ENST00000484236 MCCP23508 829 aa9.04□□□□□ -0.96
SHROOM3-206ENST00000484236 MCM4P33991 863 aa9.04□□□□□ -0.96
SHROOM3-206ENST00000484236 ANAPC15P60006 121 aa9.04□□□□□ -0.96
SHROOM3-206ENST00000484236 ZNF790Q6PG37 636 aa9.04□□□□□ -0.96
SHROOM3-206ENST00000484236 ERC1Q8IUD2 1116 aa9.04□□□□□ -0.96
SHROOM3-206ENST00000484236 LINS1Q8NG48 757 aa9.04□□□□□ -0.96
SHROOM3-206ENST00000484236 IL17RAQ96F46 866 aa9.04□□□□□ -0.96
SHROOM3-206ENST00000484236 NLRP2Q9NX02 1062 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms