RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 ZNF496Q96IT1 587 aaPredicted RBP25.69■■□□□ 1.7
NDUFA3-213ENST00000484103 KIF13BQ9NQT8 1826 aa25.69■■□□□ 1.7
NDUFA3-213ENST00000484103 C1QTNF8P60827 252 aa25.68■■□□□ 1.7
NDUFA3-213ENST00000484103 TGFB2P61812 414 aa25.68■■□□□ 1.7
NDUFA3-213ENST00000484103 UBR2Q8IWV8 1755 aa25.67■■□□□ 1.7
NDUFA3-213ENST00000484103 SENP3-EIF4A1A0A087X0R7 540 aa25.66■■□□□ 1.7
NDUFA3-213ENST00000484103 KCNQ3O43525 872 aa25.66■■□□□ 1.7
NDUFA3-213ENST00000484103 FCHSD2O94868 740 aa25.66■■□□□ 1.7
NDUFA3-213ENST00000484103 ZNF790Q6PG37 636 aa25.66■■□□□ 1.7
NDUFA3-213ENST00000484103 MCM10Q7L590 875 aa25.66■■□□□ 1.7
NDUFA3-213ENST00000484103 BTBD11A6QL63 1104 aa25.64■■□□□ 1.7
NDUFA3-213ENST00000484103 POLRMTO00411 1230 aaKnown RBP25.64■■□□□ 1.7
NDUFA3-213ENST00000484103 STARD3NLO95772 234 aa25.64■■□□□ 1.7
NDUFA3-213ENST00000484103 CHRNA5P30532 468 aa25.64■■□□□ 1.7
NDUFA3-213ENST00000484103 DCTN1Q14203 1278 aa25.64■■□□□ 1.7
NDUFA3-213ENST00000484103 BICDL1Q6ZP65 573 aa25.64■■□□□ 1.7
NDUFA3-213ENST00000484103 ARHGAP27Q6ZUM4 889 aa25.64■■□□□ 1.7
NDUFA3-213ENST00000484103 VSIG10Q8N0Z9 540 aa25.64■■□□□ 1.7
NDUFA3-213ENST00000484103 RTF1Q92541 710 aaKnown RBP25.63■■□□□ 1.69
NDUFA3-213ENST00000484103 GPBP1L1Q9HC44 474 aaPredicted RBP25.63■■□□□ 1.69
NDUFA3-213ENST00000484103 HEG1Q9ULI3 1381 aa25.63■■□□□ 1.69
NDUFA3-213ENST00000484103 SIPA1L3O60292 1781 aaPredicted RBP25.63■■□□□ 1.69
NDUFA3-213ENST00000484103 NFIXQ14938 502 aa25.62■■□□□ 1.69
NDUFA3-213ENST00000484103 NARFQ9UHQ1 456 aa25.62■■□□□ 1.69
NDUFA3-213ENST00000484103 TM4SF1P30408 202 aa25.6■■□□□ 1.69
NDUFA3-213ENST00000484103 PIP4K2AP48426 406 aaPredicted RBP25.6■■□□□ 1.69
NDUFA3-213ENST00000484103 FMNL2Q96PY5 1086 aa25.6■■□□□ 1.69
NDUFA3-213ENST00000484103 BCL2L12Q9HB09 334 aa25.6■■□□□ 1.69
NDUFA3-213ENST00000484103 ADCY9O60503 1353 aa25.59■■□□□ 1.69
NDUFA3-213ENST00000484103 CEMIPQ8WUJ3 1361 aa25.59■■□□□ 1.69
NDUFA3-213ENST00000484103 KCNA3P22001 575 aa25.59■■□□□ 1.69
NDUFA3-213ENST00000484103 TBC1D2BQ9UPU7 963 aa25.59■■□□□ 1.69
NDUFA3-213ENST00000484103 A1BGP04217 495 aa25.58■■□□□ 1.69
NDUFA3-213ENST00000484103 PIM2Q9P1W9 311 aa25.58■■□□□ 1.69
NDUFA3-213ENST00000484103 PRAMEF22A3QJZ6 481 aa25.57■■□□□ 1.68
NDUFA3-213ENST00000484103 SERPINB2P05120 415 aa25.56■■□□□ 1.68
NDUFA3-213ENST00000484103 EIF5P55010 431 aaKnown RBP25.55■■□□□ 1.68
NDUFA3-213ENST00000484103 DALRD3Q5D0E6 543 aaKnown RBP25.55■■□□□ 1.68
NDUFA3-213ENST00000484103 CCDC24Q8N4L8 307 aa25.55■■□□□ 1.68
NDUFA3-213ENST00000484103 BRCA1P38398 1863 aaKnown RBP25.55■■□□□ 1.68
NDUFA3-213ENST00000484103 AFDNP55196 1824 aaKnown RBP25.54■■□□□ 1.68
NDUFA3-213ENST00000484103 NPM2Q86SE8 214 aaKnown RBP25.54■■□□□ 1.68
NDUFA3-213ENST00000484103 TEX13AQ9BXU3 409 aaPredicted RBP25.54■■□□□ 1.68
NDUFA3-213ENST00000484103 MIS18AQ9NYP9 233 aa25.54■■□□□ 1.68
NDUFA3-213ENST00000484103 A0A087WZG4 1122 aa25.53■■□□□ 1.68
NDUFA3-213ENST00000484103 NEFMP07197 916 aa25.53■■□□□ 1.68
NDUFA3-213ENST00000484103 TBC1D9BQ66K14 1250 aa25.53■■□□□ 1.68
NDUFA3-213ENST00000484103 USP16Q9Y5T5 823 aa25.53■■□□□ 1.68
NDUFA3-213ENST00000484103 CARMIL3Q8ND23 1372 aa25.53■■□□□ 1.68
NDUFA3-213ENST00000484103 SCN7AQ01118 1682 aa25.49■■□□□ 1.67
NDUFA3-213ENST00000484103 NPHP1O15259 732 aa25.49■■□□□ 1.67
NDUFA3-213ENST00000484103 IL6STP40189 918 aaPredicted RBP25.49■■□□□ 1.67
NDUFA3-213ENST00000484103 DDX10Q13206 875 aaKnown RBP25.49■■□□□ 1.67
NDUFA3-213ENST00000484103 C9orf131Q5VYM1 1079 aa25.49■■□□□ 1.67
NDUFA3-213ENST00000484103 THUMPD2Q9BTF0 503 aaKnown RBP25.49■■□□□ 1.67
NDUFA3-213ENST00000484103 C2CD5Q86YS7 1000 aa25.48■■□□□ 1.67
NDUFA3-213ENST00000484103 ARFGEF1Q9Y6D6 1849 aa25.47■■□□□ 1.67
NDUFA3-213ENST00000484103 DZIP3Q86Y13 1208 aaKnown RBP25.47■■□□□ 1.67
NDUFA3-213ENST00000484103 SNRPA1P09661 255 aaKnown RBP25.46■■□□□ 1.67
NDUFA3-213ENST00000484103 NRXN2Q9P2S2 1712 aa25.46■■□□□ 1.67
NDUFA3-213ENST00000484103 MAPK8IP3Q9UPT6 1336 aa25.45■■□□□ 1.66
NDUFA3-213ENST00000484103 CAMTA2O94983 1202 aa25.45■■□□□ 1.66
NDUFA3-213ENST00000484103 RASSF7Q02833 373 aa25.45■■□□□ 1.66
NDUFA3-213ENST00000484103 TAF7Q15545 349 aaPredicted RBP25.45■■□□□ 1.66
NDUFA3-213ENST00000484103 RNF181Q9P0P0 153 aa25.45■■□□□ 1.66
NDUFA3-213ENST00000484103 ZNF219Q9P2Y4 722 aaPredicted RBP25.45■■□□□ 1.66
NDUFA3-213ENST00000484103 DLG5Q8TDM6 1919 aa25.44■■□□□ 1.66
NDUFA3-213ENST00000484103 HTATSF1O43719 755 aaKnown RBP25.44■■□□□ 1.66
NDUFA3-213ENST00000484103 PLEKHF1Q96S99 279 aa25.44■■□□□ 1.66
NDUFA3-213ENST00000484103 H0YIN7 160 aa25.43■■□□□ 1.66
NDUFA3-213ENST00000484103 NGEFQ8N5V2 710 aa25.43■■□□□ 1.66
NDUFA3-213ENST00000484103 ZNF622Q969S3 477 aaKnown RBP eCLIP25.43■■□□□ 1.66
NDUFA3-213ENST00000484103 NFE2L2Q16236 605 aa25.42■■□□□ 1.66
NDUFA3-213ENST00000484103 SETDB2Q96T68 719 aa25.42■■□□□ 1.66
NDUFA3-213ENST00000484103 PRR5LQ6MZQ0 368 aa25.41■■□□□ 1.66
NDUFA3-213ENST00000484103 NMRK2Q9NPI5 230 aa25.41■■□□□ 1.66
NDUFA3-213ENST00000484103 FAM177BA6PVY3 158 aa25.4■■□□□ 1.66
NDUFA3-213ENST00000484103 KIF3CO14782 793 aa25.4■■□□□ 1.66
NDUFA3-213ENST00000484103 TTLL6Q8N841 843 aa25.4■■□□□ 1.66
NDUFA3-213ENST00000484103 CNBD1Q8NA66 436 aa25.4■■□□□ 1.66
NDUFA3-213ENST00000484103 BCORQ6W2J9 1755 aa25.39■■□□□ 1.66
NDUFA3-213ENST00000484103 NBPF26B4DH59 902 aa25.39■■□□□ 1.66
NDUFA3-213ENST00000484103 NBPF10Q6P3W6 841 aaKnown RBP25.39■■□□□ 1.66
NDUFA3-213ENST00000484103 NBPF15Q8N660 670 aa25.39■■□□□ 1.66
NDUFA3-213ENST00000484103 ANKRD31Q8N7Z5 1873 aa25.38■■□□□ 1.65
NDUFA3-213ENST00000484103 DLEC1Q9Y238 1755 aa25.38■■□□□ 1.65
NDUFA3-213ENST00000484103 RALBP1Q15311 655 aa25.37■■□□□ 1.65
NDUFA3-213ENST00000484103 PDE6BP35913 854 aa25.36■■□□□ 1.65
NDUFA3-213ENST00000484103 ST5P78524 1137 aa25.36■■□□□ 1.65
NDUFA3-213ENST00000484103 CCDC146Q8IYE0 955 aa25.36■■□□□ 1.65
NDUFA3-213ENST00000484103 COL11A2P13942 1736 aaPredicted RBP25.36■■□□□ 1.65
NDUFA3-213ENST00000484103 NBPF5PQ86XG9 351 aaPredicted RBP25.35■■□□□ 1.65
NDUFA3-213ENST00000484103 BRIP1Q9BX63 1249 aa25.35■■□□□ 1.65
NDUFA3-213ENST00000484103 PNNQ9H307 717 aaKnown RBP25.35■■□□□ 1.65
NDUFA3-213ENST00000484103 RRP7AQ9Y3A4 280 aaKnown RBP25.35■■□□□ 1.65
NDUFA3-213ENST00000484103 MYL6BP14649 208 aa25.34■■□□□ 1.65
NDUFA3-213ENST00000484103 ZNF652Q9Y2D9 606 aa25.34■■□□□ 1.65
NDUFA3-213ENST00000484103 LAMB4A4D0S4 1761 aa25.33■■□□□ 1.65
NDUFA3-213ENST00000484103 KDM3BQ7LBC6 1761 aa25.33■■□□□ 1.65
NDUFA3-213ENST00000484103 C21orf2O43822 256 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms