RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 NLRP2Q9NX02 1062 aa12.04□□□□□ -0.48
UFD1-208ENST00000484101 MEGF6O75095 1541 aa12.04□□□□□ -0.48
UFD1-208ENST00000484101 COL5A2P05997 1499 aaPredicted RBP12.03□□□□□ -0.48
UFD1-208ENST00000484101 KCNQ2O43526 872 aa12.03□□□□□ -0.48
UFD1-208ENST00000484101 FKBP5Q13451 457 aaPredicted RBP12.03□□□□□ -0.48
UFD1-208ENST00000484101 FAM182BQ5T319 152 aa12.03□□□□□ -0.48
UFD1-208ENST00000484101 IFNL2Q8IZJ0 200 aa12.03□□□□□ -0.48
UFD1-208ENST00000484101 MIS18AQ9NYP9 233 aa12.03□□□□□ -0.48
UFD1-208ENST00000484101 WDR17Q8IZU2 1322 aa12.03□□□□□ -0.48
UFD1-208ENST00000484101 PLCH1Q4KWH8 1693 aa12.03□□□□□ -0.48
UFD1-208ENST00000484101 COL14A1Q05707 1796 aaKnown RBP12.02□□□□□ -0.48
UFD1-208ENST00000484101 CHD4Q14839 1912 aa12.02□□□□□ -0.49
UFD1-208ENST00000484101 BMP2KLQ5H9B9 411 aa12.02□□□□□ -0.49
UFD1-208ENST00000484101 DCTPP1Q9H773 170 aa12.02□□□□□ -0.49
UFD1-208ENST00000484101 DBF4Q9UBU7 674 aaPredicted RBP12.02□□□□□ -0.49
UFD1-208ENST00000484101 RREB1Q92766 1687 aa12.01□□□□□ -0.49
UFD1-208ENST00000484101 GNAI2P04899 355 aa12.01□□□□□ -0.49
UFD1-208ENST00000484101 PHKG2P15735 406 aa12.01□□□□□ -0.49
UFD1-208ENST00000484101 CEP85Q6P2H3 762 aa12.01□□□□□ -0.49
UFD1-208ENST00000484101 SKAP1Q86WV1 359 aa12.01□□□□□ -0.49
UFD1-208ENST00000484101 DCAF5Q96JK2 942 aa12.01□□□□□ -0.49
UFD1-208ENST00000484101 ANP32EQ9BTT0 268 aa12.01□□□□□ -0.49
UFD1-208ENST00000484101 LGR6Q9HBX8 967 aa12.01□□□□□ -0.49
UFD1-208ENST00000484101 PRDM11Q9NQV5 511 aa12.01□□□□□ -0.49
UFD1-208ENST00000484101 CCDC9Q9Y3X0 531 aaKnown RBP12.01□□□□□ -0.49
UFD1-208ENST00000484101 KDM6AO15550 1401 aaPredicted RBP12.01□□□□□ -0.49
UFD1-208ENST00000484101 NUP188Q5SRE5 1749 aa12□□□□□ -0.49
UFD1-208ENST00000484101 NWD2Q9ULI1 1742 aa12□□□□□ -0.49
UFD1-208ENST00000484101 A0A0G2JS52 829 aa12□□□□□ -0.49
UFD1-208ENST00000484101 MSH5O43196 834 aa12□□□□□ -0.49
UFD1-208ENST00000484101 GIGYF1O75420 1035 aaPredicted RBP12□□□□□ -0.49
UFD1-208ENST00000484101 MPRIPQ6WCQ1 1025 aa12□□□□□ -0.49
UFD1-208ENST00000484101 SLC52A2Q9HAB3 445 aa12□□□□□ -0.49
UFD1-208ENST00000484101 DAXXQ9UER7 740 aaPredicted RBP12□□□□□ -0.49
UFD1-208ENST00000484101 PCDH11XQ9BZA7 1347 aa12□□□□□ -0.49
UFD1-208ENST00000484101 PCDH11YQ9BZA8 1340 aa12□□□□□ -0.49
UFD1-208ENST00000484101 PAPPAQ13219 1627 aa12□□□□□ -0.49
UFD1-208ENST00000484101 C5P01031 1676 aa12□□□□□ -0.49
UFD1-208ENST00000484101 UBR2Q8IWV8 1755 aa12□□□□□ -0.49
UFD1-208ENST00000484101 NPM2Q86SE8 214 aaKnown RBP11.99□□□□□ -0.49
UFD1-208ENST00000484101 SIRT2Q8IXJ6 389 aa11.99□□□□□ -0.49
UFD1-208ENST00000484101 HYPKQ9NX55 129 aa11.99□□□□□ -0.49
UFD1-208ENST00000484101 SHANK3Q9BYB0 1731 aa11.99□□□□□ -0.49
UFD1-208ENST00000484101 WNK3Q9BYP7 1800 aa11.98□□□□□ -0.49
UFD1-208ENST00000484101 DDX58O95786 925 aaKnown RBP11.98□□□□□ -0.49
UFD1-208ENST00000484101 FAM98CQ17RN3 349 aaKnown RBP11.98□□□□□ -0.49
UFD1-208ENST00000484101 ANKRD45Q5TZF3 282 aa11.98□□□□□ -0.49
UFD1-208ENST00000484101 SLC4A10Q6U841 1118 aa11.98□□□□□ -0.49
UFD1-208ENST00000484101 G2E3Q7L622 706 aa11.98□□□□□ -0.49
UFD1-208ENST00000484101 MEIS3Q99687 375 aa11.98□□□□□ -0.49
UFD1-208ENST00000484101 CARD10Q9BWT7 1032 aa11.98□□□□□ -0.49
UFD1-208ENST00000484101 C1orf115Q9H7X2 142 aa11.98□□□□□ -0.49
UFD1-208ENST00000484101 ERBB4Q15303 1308 aa11.97□□□□□ -0.49
UFD1-208ENST00000484101 ALDH1L1O75891 902 aa11.97□□□□□ -0.49
UFD1-208ENST00000484101 BECN1Q14457 450 aa11.97□□□□□ -0.49
UFD1-208ENST00000484101 LNPKQ9C0E8 428 aa11.97□□□□□ -0.49
UFD1-208ENST00000484101 SRCIN1Q9C0H9 1055 aa11.97□□□□□ -0.49
UFD1-208ENST00000484101 UBTFL1P0CB47 393 aaPredicted RBP11.96□□□□□ -0.49
UFD1-208ENST00000484101 NBPF14Q5TI25 921 aa11.96□□□□□ -0.49
UFD1-208ENST00000484101 ZNF790Q6PG37 636 aa11.96□□□□□ -0.49
UFD1-208ENST00000484101 TTC5Q8N0Z6 440 aa11.96□□□□□ -0.49
UFD1-208ENST00000484101 CABLES1Q8TDN4 633 aa11.96□□□□□ -0.49
UFD1-208ENST00000484101 DNAAF4Q8WXU2 420 aa11.96□□□□□ -0.49
UFD1-208ENST00000484101 TBC1D32Q96NH3 1257 aa11.96□□□□□ -0.49
UFD1-208ENST00000484101 CHPF2Q9P2E5 772 aa11.96□□□□□ -0.49
UFD1-208ENST00000484101 TRIM37O94972 964 aa11.95□□□□□ -0.5
UFD1-208ENST00000484101 APBA3O96018 575 aa11.95□□□□□ -0.5
UFD1-208ENST00000484101 CHRNA2Q15822 529 aa11.95□□□□□ -0.5
UFD1-208ENST00000484101 DDX21Q9NR30 783 aaKnown RBP eCLIP11.95□□□□□ -0.5
UFD1-208ENST00000484101 ERVV-2B6SEH9 535 aa11.94□□□□□ -0.5
UFD1-208ENST00000484101 F6X3S4 739 aa11.94□□□□□ -0.5
UFD1-208ENST00000484101 IL2RBP14784 551 aa11.94□□□□□ -0.5
UFD1-208ENST00000484101 EIF2S2P20042 333 aaKnown RBP11.94□□□□□ -0.5
UFD1-208ENST00000484101 NKX1-1Q15270 411 aaPredicted RBP11.94□□□□□ -0.5
UFD1-208ENST00000484101 HSP90AB4PQ58FF6 505 aa11.94□□□□□ -0.5
UFD1-208ENST00000484101 TOM1L2Q6ZVM7 507 aa11.94□□□□□ -0.5
UFD1-208ENST00000484101 ZCRB1Q8TBF4 217 aaKnown RBP11.94□□□□□ -0.5
UFD1-208ENST00000484101 FMNL2Q96PY5 1086 aa11.94□□□□□ -0.5
UFD1-208ENST00000484101 TUBGCP6Q96RT7 1819 aa11.93□□□□□ -0.5
UFD1-208ENST00000484101 AOX1Q06278 1338 aa11.93□□□□□ -0.5
UFD1-208ENST00000484101 RAB11FIP3O75154 756 aa11.93□□□□□ -0.5
UFD1-208ENST00000484101 PLEKHG5O94827 1062 aa11.93□□□□□ -0.5
UFD1-208ENST00000484101 SNRPA1P09661 255 aaKnown RBP11.93□□□□□ -0.5
UFD1-208ENST00000484101 ATP8B2P98198 1209 aa11.93□□□□□ -0.5
UFD1-208ENST00000484101 CASC1Q6TDU7 716 aa11.93□□□□□ -0.5
UFD1-208ENST00000484101 KSR2Q6VAB6 950 aa11.93□□□□□ -0.5
UFD1-208ENST00000484101 NRAPQ86VF7 1730 aa11.93□□□□□ -0.5
UFD1-208ENST00000484101 ADCY9O60503 1353 aa11.92□□□□□ -0.5
UFD1-208ENST00000484101 THSD7AQ9UPZ6 1657 aa11.92□□□□□ -0.5
UFD1-208ENST00000484101 CYP27B1O15528 508 aa11.92□□□□□ -0.5
UFD1-208ENST00000484101 CDC45O75419 566 aa11.92□□□□□ -0.5
UFD1-208ENST00000484101 CABP4P57796 275 aa11.92□□□□□ -0.5
UFD1-208ENST00000484101 BEND3Q5T5X7 828 aa11.92□□□□□ -0.5
UFD1-208ENST00000484101 NECTIN2Q92692 538 aa11.92□□□□□ -0.5
UFD1-208ENST00000484101 OSBPL3Q9H4L5 887 aa11.92□□□□□ -0.5
UFD1-208ENST00000484101 ARFGEF2Q9Y6D5 1785 aa11.92□□□□□ -0.5
UFD1-208ENST00000484101 KCNQ3O43525 872 aa11.91□□□□□ -0.5
UFD1-208ENST00000484101 SLC34A2O95436 690 aa11.91□□□□□ -0.5
UFD1-208ENST00000484101 MTX1Q13505 466 aa11.91□□□□□ -0.5
UFD1-208ENST00000484101 TTC22Q5TAA0 569 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms