RNA–Protein interactions for RNA: ENST00000484048.1

UBE2E1-209, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 3

Gene UBE2E1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-209ENST00000484048 MIS18AQ9NYP9 233 aa20.9■□□□□ 0.94
UBE2E1-209ENST00000484048 BTBD11A6QL63 1104 aa20.89■□□□□ 0.93
UBE2E1-209ENST00000484048 NFATC2IPQ8NCF5 419 aa20.89■□□□□ 0.93
UBE2E1-209ENST00000484048 EXOSC9Q06265 439 aaKnown RBP20.88■□□□□ 0.93
UBE2E1-209ENST00000484048 C5P01031 1676 aa20.88■□□□□ 0.93
UBE2E1-209ENST00000484048 LAMB4A4D0S4 1761 aa20.87■□□□□ 0.93
UBE2E1-209ENST00000484048 KIF3CO14782 793 aa20.86■□□□□ 0.93
UBE2E1-209ENST00000484048 CAPN15O75808 1086 aa20.86■□□□□ 0.93
UBE2E1-209ENST00000484048 DNAJC5GQ8N7S2 189 aa20.86■□□□□ 0.93
UBE2E1-209ENST00000484048 CT47B1P0C2W7 299 aaPredicted RBP20.85■□□□□ 0.93
UBE2E1-209ENST00000484048 TMOD3Q9NYL9 352 aa20.85■□□□□ 0.93
UBE2E1-209ENST00000484048 TUBGCP6Q96RT7 1819 aa20.85■□□□□ 0.93
UBE2E1-209ENST00000484048 KCNQ3O43525 872 aa20.84■□□□□ 0.93
UBE2E1-209ENST00000484048 CD2APQ9Y5K6 639 aa20.84■□□□□ 0.93
UBE2E1-209ENST00000484048 KCPQ6ZWJ8 1503 aa20.83■□□□□ 0.93
UBE2E1-209ENST00000484048 MSH5O43196 834 aa20.83■□□□□ 0.93
UBE2E1-209ENST00000484048 EIF4A1P60842 406 aaKnown RBP20.83■□□□□ 0.93
UBE2E1-209ENST00000484048 COL13A1Q5TAT6 717 aaPredicted RBP20.83■□□□□ 0.93
UBE2E1-209ENST00000484048 ZNF790Q6PG37 636 aa20.83■□□□□ 0.93
UBE2E1-209ENST00000484048 TSPYL6Q8N831 410 aa20.83■□□□□ 0.93
UBE2E1-209ENST00000484048 C8orf58Q8NAV2 365 aa20.83■□□□□ 0.93
UBE2E1-209ENST00000484048 PRIM1P49642 420 aaKnown RBP20.82■□□□□ 0.92
UBE2E1-209ENST00000484048 KCNQ4P56696 695 aa20.82■□□□□ 0.92
UBE2E1-209ENST00000484048 SLC39A6Q13433 755 aa20.82■□□□□ 0.92
UBE2E1-209ENST00000484048 KRT24Q2M2I5 525 aa20.82■□□□□ 0.92
UBE2E1-209ENST00000484048 PIGBQ92521 554 aa20.82■□□□□ 0.92
UBE2E1-209ENST00000484048 HEG1Q9ULI3 1381 aa20.82■□□□□ 0.92
UBE2E1-209ENST00000484048 TWISTNBQ3B726 338 aaPredicted RBP20.81■□□□□ 0.92
UBE2E1-209ENST00000484048 RCAN3Q9UKA8 241 aa20.81■□□□□ 0.92
UBE2E1-209ENST00000484048 VAMP4O75379 141 aa20.8■□□□□ 0.92
UBE2E1-209ENST00000484048 MSL1Q68DK7 614 aa20.8■□□□□ 0.92
UBE2E1-209ENST00000484048 SOS1Q07889 1333 aaPredicted RBP20.79■□□□□ 0.92
UBE2E1-209ENST00000484048 CICQ96RK0 1608 aaPredicted RBP20.79■□□□□ 0.92
UBE2E1-209ENST00000484048 COL23A1Q86Y22 540 aaPredicted RBP20.79■□□□□ 0.92
UBE2E1-209ENST00000484048 TTC5Q8N0Z6 440 aa20.79■□□□□ 0.92
UBE2E1-209ENST00000484048 SYTL4Q96C24 671 aaPredicted RBP20.79■□□□□ 0.92
UBE2E1-209ENST00000484048 ZNF831Q5JPB2 1677 aa20.79■□□□□ 0.92
UBE2E1-209ENST00000484048 LY75O60449 1722 aa20.78■□□□□ 0.92
UBE2E1-209ENST00000484048 ELL2O00472 640 aaPredicted RBP20.78■□□□□ 0.92
UBE2E1-209ENST00000484048 PRELPP51888 382 aa20.78■□□□□ 0.92
UBE2E1-209ENST00000484048 ZNF428Q96B54 188 aa20.78■□□□□ 0.92
UBE2E1-209ENST00000484048 TJP1Q07157 1748 aa20.78■□□□□ 0.92
UBE2E1-209ENST00000484048 HOXB7P09629 217 aa20.77■□□□□ 0.92
UBE2E1-209ENST00000484048 ATG3Q9NT62 314 aa20.77■□□□□ 0.92
UBE2E1-209ENST00000484048 ASAP1Q9ULH1 1129 aa20.77■□□□□ 0.92
UBE2E1-209ENST00000484048 TOMM70O94826 608 aa20.76■□□□□ 0.91
UBE2E1-209ENST00000484048 RARSP54136 660 aaKnown RBP20.76■□□□□ 0.91
UBE2E1-209ENST00000484048 TNS4Q8IZW8 715 aa20.76■□□□□ 0.91
UBE2E1-209ENST00000484048 ZNF496Q96IT1 587 aaPredicted RBP20.76■□□□□ 0.91
UBE2E1-209ENST00000484048 FMNL2Q96PY5 1086 aa20.76■□□□□ 0.91
UBE2E1-209ENST00000484048 ALDH1L2Q3SY69 923 aa20.74■□□□□ 0.91
UBE2E1-209ENST00000484048 CCNL1Q9UK58 526 aaPredicted RBP20.74■□□□□ 0.91
UBE2E1-209ENST00000484048 TAF1LQ8IZX4 1826 aa20.74■□□□□ 0.91
UBE2E1-209ENST00000484048 COL5A3P25940 1745 aaPredicted RBP20.73■□□□□ 0.91
UBE2E1-209ENST00000484048 SUPT16HQ9Y5B9 1047 aaKnown RBP20.73■□□□□ 0.91
UBE2E1-209ENST00000484048 RNF123Q5XPI4 1314 aa20.73■□□□□ 0.91
UBE2E1-209ENST00000484048 JMYQ8N9B5 988 aa20.72■□□□□ 0.91
UBE2E1-209ENST00000484048 SSH1Q8WYL5 1049 aa20.72■□□□□ 0.91
UBE2E1-209ENST00000484048 BCAR3O75815 825 aa20.71■□□□□ 0.91
UBE2E1-209ENST00000484048 SNRPA1P09661 255 aaKnown RBP20.71■□□□□ 0.91
UBE2E1-209ENST00000484048 KLRG1Q96E93 195 aa20.71■□□□□ 0.91
UBE2E1-209ENST00000484048 PRAMEF22A3QJZ6 481 aa20.7■□□□□ 0.9
UBE2E1-209ENST00000484048 PTCD1O75127 700 aaKnown RBP20.7■□□□□ 0.9
UBE2E1-209ENST00000484048 VSIG10Q8N0Z9 540 aa20.7■□□□□ 0.9
UBE2E1-209ENST00000484048 SMARCC1Q92922 1105 aaPredicted RBP20.7■□□□□ 0.9
UBE2E1-209ENST00000484048 WWC3Q9ULE0 1092 aa20.7■□□□□ 0.9
UBE2E1-209ENST00000484048 BRPF1P55201 1214 aaPredicted RBP20.69■□□□□ 0.9
UBE2E1-209ENST00000484048 HDGFL1Q5TGJ6 251 aa20.69■□□□□ 0.9
UBE2E1-209ENST00000484048 BCL2L13Q9BXK5 485 aa20.69■□□□□ 0.9
UBE2E1-209ENST00000484048 SMC4Q9NTJ3 1288 aa20.69■□□□□ 0.9
UBE2E1-209ENST00000484048 WDR90Q96KV7 1748 aa20.69■□□□□ 0.9
UBE2E1-209ENST00000484048 PALLDQ8WX93 1383 aa20.69■□□□□ 0.9
UBE2E1-209ENST00000484048 CCDC30Q5VVM6 783 aa20.68■□□□□ 0.9
UBE2E1-209ENST00000484048 MRPL50Q8N5N7 158 aaKnown RBP20.68■□□□□ 0.9
UBE2E1-209ENST00000484048 CHMP4AQ9BY43 222 aa20.68■□□□□ 0.9
UBE2E1-209ENST00000484048 MYH14Q7Z406 1995 aaKnown RBP20.68■□□□□ 0.9
UBE2E1-209ENST00000484048 RRP1P56182 461 aaKnown RBP20.67■□□□□ 0.9
UBE2E1-209ENST00000484048 RBM42Q9BTD8 480 aaKnown RBP20.67■□□□□ 0.9
UBE2E1-209ENST00000484048 TCERG1O14776 1098 aaKnown RBP20.66■□□□□ 0.9
UBE2E1-209ENST00000484048 EIF2S2P20042 333 aaKnown RBP20.66■□□□□ 0.9
UBE2E1-209ENST00000484048 FLAD1Q8NFF5 587 aa20.66■□□□□ 0.9
UBE2E1-209ENST00000484048 SLC4A9Q96Q91 983 aa20.66■□□□□ 0.9
UBE2E1-209ENST00000484048 USP16Q9Y5T5 823 aa20.66■□□□□ 0.9
UBE2E1-209ENST00000484048 N4BP2Q86UW6 1770 aaPredicted RBP20.65■□□□□ 0.9
UBE2E1-209ENST00000484048 HTRA3P83110 453 aa20.65■□□□□ 0.9
UBE2E1-209ENST00000484048 NECTIN2Q92692 538 aa20.65■□□□□ 0.9
UBE2E1-209ENST00000484048 KIF16BQ96L93 1317 aa20.64■□□□□ 0.89
UBE2E1-209ENST00000484048 LOC102724428A0A0B4J2F2 783 aa20.64■□□□□ 0.89
UBE2E1-209ENST00000484048 SIK1P57059 783 aa20.64■□□□□ 0.89
UBE2E1-209ENST00000484048 STK31Q9BXU1 1019 aa20.64■□□□□ 0.89
UBE2E1-209ENST00000484048 TEX13AQ9BXU3 409 aaPredicted RBP20.64■□□□□ 0.89
UBE2E1-209ENST00000484048 DNAJC10Q8IXB1 793 aa20.63■□□□□ 0.89
UBE2E1-209ENST00000484048 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.63■□□□□ 0.89
UBE2E1-209ENST00000484048 RBM46Q8TBY0 533 aaKnown RBP20.63■□□□□ 0.89
UBE2E1-209ENST00000484048 ERBB4Q15303 1308 aa20.62■□□□□ 0.89
UBE2E1-209ENST00000484048 NMRK2Q9NPI5 230 aa20.62■□□□□ 0.89
UBE2E1-209ENST00000484048 CHPF2Q9P2E5 772 aa20.62■□□□□ 0.89
UBE2E1-209ENST00000484048 PLIN1O60240 522 aa20.61■□□□□ 0.89
UBE2E1-209ENST00000484048 SLC4A2P04920 1241 aa20.61■□□□□ 0.89
UBE2E1-209ENST00000484048 DBF4Q9UBU7 674 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms