RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 RRS1Q15050 365 aaKnown RBP13.88□□□□□ -0.19
SEC61A1-205ENST00000483956 MEIS3Q99687 375 aa13.88□□□□□ -0.19
SEC61A1-205ENST00000483956 STAG3Q9UJ98 1225 aa13.88□□□□□ -0.19
SEC61A1-205ENST00000483956 TECPR2O15040 1411 aa13.88□□□□□ -0.19
SEC61A1-205ENST00000483956 SOX12O15370 315 aa13.87□□□□□ -0.19
SEC61A1-205ENST00000483956 TSPYL1Q9H0U9 437 aa13.87□□□□□ -0.19
SEC61A1-205ENST00000483956 ST7Q9NRC1 585 aa13.87□□□□□ -0.19
SEC61A1-205ENST00000483956 NALCNQ8IZF0 1738 aa13.86□□□□□ -0.19
SEC61A1-205ENST00000483956 CRB1P82279 1406 aa13.86□□□□□ -0.19
SEC61A1-205ENST00000483956 PDE1AP54750 535 aa13.86□□□□□ -0.19
SEC61A1-205ENST00000483956 ILDR1Q86SU0 546 aaPredicted RBP13.86□□□□□ -0.19
SEC61A1-205ENST00000483956 NUDT16Q96DE0 195 aaKnown RBP13.86□□□□□ -0.19
SEC61A1-205ENST00000483956 IL17RAQ96F46 866 aa13.86□□□□□ -0.19
SEC61A1-205ENST00000483956 PPP6R1Q9UPN7 881 aa13.86□□□□□ -0.19
SEC61A1-205ENST00000483956 CCDC61Q9Y6R9 512 aa13.86□□□□□ -0.19
SEC61A1-205ENST00000483956 AGLP35573 1532 aa13.86□□□□□ -0.19
SEC61A1-205ENST00000483956 PLCB2Q00722 1185 aa13.86□□□□□ -0.19
SEC61A1-205ENST00000483956 CUL4AQ13619 759 aa13.86□□□□□ -0.19
SEC61A1-205ENST00000483956 UVSSAQ2YD98 709 aa13.86□□□□□ -0.19
SEC61A1-205ENST00000483956 SIRT1Q96EB6 747 aa13.86□□□□□ -0.19
SEC61A1-205ENST00000483956 SALL3Q9BXA9 1300 aa13.85□□□□□ -0.19
SEC61A1-205ENST00000483956 MLECQ14165 292 aa13.85□□□□□ -0.19
SEC61A1-205ENST00000483956 EIF4A2Q14240 407 aaKnown RBP13.85□□□□□ -0.19
SEC61A1-205ENST00000483956 KRT24Q2M2I5 525 aa13.85□□□□□ -0.19
SEC61A1-205ENST00000483956 SSH2Q76I76 1423 aa13.85□□□□□ -0.19
SEC61A1-205ENST00000483956 BRD1O95696 1058 aa13.85□□□□□ -0.19
SEC61A1-205ENST00000483956 HNRNPH2P55795 449 aaKnown RBP13.85□□□□□ -0.19
SEC61A1-205ENST00000483956 TMX3Q96JJ7 454 aa13.85□□□□□ -0.19
SEC61A1-205ENST00000483956 ARHGEF10O15013 1369 aa13.85□□□□□ -0.19
SEC61A1-205ENST00000483956 ANAPC15P60006 121 aa13.85□□□□□ -0.19
SEC61A1-205ENST00000483956 SYCP1Q15431 976 aa13.85□□□□□ -0.19
SEC61A1-205ENST00000483956 FAM184AQ8NB25 1140 aa13.85□□□□□ -0.19
SEC61A1-205ENST00000483956 INTS4Q96HW7 963 aaKnown RBP13.85□□□□□ -0.19
SEC61A1-205ENST00000483956 CCT4P50991 539 aaKnown RBP13.84□□□□□ -0.19
SEC61A1-205ENST00000483956 SULT6B1Q6IMI4 303 aa13.84□□□□□ -0.19
SEC61A1-205ENST00000483956 SYAP1Q96A49 352 aaPredicted RBP13.84□□□□□ -0.19
SEC61A1-205ENST00000483956 HCLS1P14317 486 aaPredicted RBP13.84□□□□□ -0.19
SEC61A1-205ENST00000483956 RAD51AP2Q09MP3 1159 aa13.84□□□□□ -0.19
SEC61A1-205ENST00000483956 OVOS2A0A0J9YW53 1432 aa13.84□□□□□ -0.19
SEC61A1-205ENST00000483956 OVOS2Q6IE36 1432 aa13.84□□□□□ -0.19
SEC61A1-205ENST00000483956 TNNT3P45378 269 aaPredicted RBP13.83□□□□□ -0.19
SEC61A1-205ENST00000483956 N4BP2Q86UW6 1770 aaPredicted RBP13.83□□□□□ -0.2
SEC61A1-205ENST00000483956 PEAK1Q9H792 1746 aa13.83□□□□□ -0.2
SEC61A1-205ENST00000483956 APBB1O00213 710 aa13.83□□□□□ -0.2
SEC61A1-205ENST00000483956 NEK4P51957 841 aa13.83□□□□□ -0.2
SEC61A1-205ENST00000483956 ESYT1Q9BSJ8 1104 aa13.83□□□□□ -0.2
SEC61A1-205ENST00000483956 TOPAZ1Q8N9V7 1692 aa13.83□□□□□ -0.2
SEC61A1-205ENST00000483956 METP08581 1390 aa13.83□□□□□ -0.2
SEC61A1-205ENST00000483956 GADD45BO75293 160 aaPredicted RBP13.82□□□□□ -0.2
SEC61A1-205ENST00000483956 MMP14P50281 582 aa13.82□□□□□ -0.2
SEC61A1-205ENST00000483956 SPC24Q8NBT2 197 aa13.82□□□□□ -0.2
SEC61A1-205ENST00000483956 HDAC5Q9UQL6 1122 aa13.82□□□□□ -0.2
SEC61A1-205ENST00000483956 SLC4A2P04920 1241 aa13.82□□□□□ -0.2
SEC61A1-205ENST00000483956 MCCP23508 829 aa13.82□□□□□ -0.2
SEC61A1-205ENST00000483956 FOXD4L6Q3SYB3 417 aaPredicted RBP13.82□□□□□ -0.2
SEC61A1-205ENST00000483956 FOXD4L3Q6VB84 417 aaPredicted RBP13.82□□□□□ -0.2
SEC61A1-205ENST00000483956 MCM10Q7L590 875 aa13.82□□□□□ -0.2
SEC61A1-205ENST00000483956 YY1AP1Q9H869 796 aa13.82□□□□□ -0.2
SEC61A1-205ENST00000483956 GDPD2Q9HCC8 539 aa13.82□□□□□ -0.2
SEC61A1-205ENST00000483956 PHF14O94880 888 aa13.82□□□□□ -0.2
SEC61A1-205ENST00000483956 PSEN1P49768 467 aa13.82□□□□□ -0.2
SEC61A1-205ENST00000483956 C16orf45Q96MC5 204 aaPredicted RBP13.82□□□□□ -0.2
SEC61A1-205ENST00000483956 TMX1Q9H3N1 280 aa13.82□□□□□ -0.2
SEC61A1-205ENST00000483956 RSPH14Q9UHP6 348 aa13.82□□□□□ -0.2
SEC61A1-205ENST00000483956 KDM4AO75164 1064 aa13.81□□□□□ -0.2
SEC61A1-205ENST00000483956 KMT5BQ4FZB7 885 aa13.81□□□□□ -0.2
SEC61A1-205ENST00000483956 EFCC1Q9HA90 598 aa13.81□□□□□ -0.2
SEC61A1-205ENST00000483956 GEMIN8Q9NWZ8 242 aaKnown RBP13.81□□□□□ -0.2
SEC61A1-205ENST00000483956 LOC102724159A0A0B4J2E5 919 aa13.81□□□□□ -0.2
SEC61A1-205ENST00000483956 SMTNL1A8MU46 457 aa13.81□□□□□ -0.2
SEC61A1-205ENST00000483956 AP5Z1O43299 807 aa13.81□□□□□ -0.2
SEC61A1-205ENST00000483956 EPB41L2O43491 1005 aaKnown RBP13.81□□□□□ -0.2
SEC61A1-205ENST00000483956 PWP2Q15269 919 aaKnown RBP13.81□□□□□ -0.2
SEC61A1-205ENST00000483956 TTC21BQ7Z4L5 1316 aa13.81□□□□□ -0.2
SEC61A1-205ENST00000483956 GNAI2P04899 355 aa13.8□□□□□ -0.2
SEC61A1-205ENST00000483956 FAM208AQ9UK61 1670 aaKnown RBP13.8□□□□□ -0.2
SEC61A1-205ENST00000483956 XRN1Q8IZH2 1706 aaKnown RBP13.8□□□□□ -0.2
SEC61A1-205ENST00000483956 MYCNP04198 464 aaPredicted RBP13.8□□□□□ -0.2
SEC61A1-205ENST00000483956 CYP2C19P33261 490 aa13.8□□□□□ -0.2
SEC61A1-205ENST00000483956 TPRNQ4KMQ1 711 aa13.8□□□□□ -0.2
SEC61A1-205ENST00000483956 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.8□□□□□ -0.2
SEC61A1-205ENST00000483956 FMN2Q9NZ56 1722 aa13.8□□□□□ -0.2
SEC61A1-205ENST00000483956 PRR36Q9H6K5 1346 aa13.79□□□□□ -0.2
SEC61A1-205ENST00000483956 NCKAP5LQ9HCH0 1330 aa13.79□□□□□ -0.2
SEC61A1-205ENST00000483956 USP31Q70CQ4 1352 aa13.79□□□□□ -0.2
SEC61A1-205ENST00000483956 LRRCC1Q9C099 1032 aa13.79□□□□□ -0.2
SEC61A1-205ENST00000483956 FAM53CQ9NYF3 392 aa13.79□□□□□ -0.2
SEC61A1-205ENST00000483956 STAP2Q9UGK3 403 aa13.79□□□□□ -0.2
SEC61A1-205ENST00000483956 LRRC37A3O60309 1634 aa13.79□□□□□ -0.2
SEC61A1-205ENST00000483956 MX1P20591 662 aa13.79□□□□□ -0.2
SEC61A1-205ENST00000483956 RBM6P78332 1123 aaKnown RBP13.79□□□□□ -0.2
SEC61A1-205ENST00000483956 AOX1Q06278 1338 aa13.79□□□□□ -0.2
SEC61A1-205ENST00000483956 CHMLP26374 656 aa13.78□□□□□ -0.2
SEC61A1-205ENST00000483956 TXNDC2Q86VQ3 553 aa13.78□□□□□ -0.2
SEC61A1-205ENST00000483956 ZNF397Q8NF99 534 aaPredicted RBP13.78□□□□□ -0.2
SEC61A1-205ENST00000483956 SRCIN1Q9C0H9 1055 aa13.78□□□□□ -0.2
SEC61A1-205ENST00000483956 CACNA1FO60840 1977 aa13.78□□□□□ -0.2
SEC61A1-205ENST00000483956 NOP2P46087 812 aaKnown RBP13.78□□□□□ -0.2
SEC61A1-205ENST00000483956 CCDC112Q8NEF3 446 aa13.78□□□□□ -0.2
SEC61A1-205ENST00000483956 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms