RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 PDE4CQ08493 712 aa7.23□□□□□ -1.25
PTCD3-214ENST00000483925 VAC14Q08AM6 782 aa7.23□□□□□ -1.25
PTCD3-214ENST00000483925 MAP7D1Q3KQU3 841 aa7.23□□□□□ -1.25
PTCD3-214ENST00000483925 FIGNL1Q6PIW4 674 aa7.23□□□□□ -1.25
PTCD3-214ENST00000483925 TBC1D9Q6ZT07 1266 aa7.23□□□□□ -1.25
PTCD3-214ENST00000483925 NDFIP2Q9NV92 336 aa7.23□□□□□ -1.25
PTCD3-214ENST00000483925 C2CD2LO14523 706 aa7.22□□□□□ -1.25
PTCD3-214ENST00000483925 PROCP04070 461 aa7.22□□□□□ -1.25
PTCD3-214ENST00000483925 INHAP05111 366 aa7.22□□□□□ -1.25
PTCD3-214ENST00000483925 PLA2G4AP47712 749 aa7.22□□□□□ -1.25
PTCD3-214ENST00000483925 GDF10P55107 478 aa7.22□□□□□ -1.25
PTCD3-214ENST00000483925 CTBSQ01459 385 aa7.22□□□□□ -1.25
PTCD3-214ENST00000483925 WASHC4Q2M389 1173 aa7.22□□□□□ -1.25
PTCD3-214ENST00000483925 ALYREFQ86V81 257 aaKnown RBP7.22□□□□□ -1.25
PTCD3-214ENST00000483925 C1orf216Q8TAB5 229 aa7.22□□□□□ -1.25
PTCD3-214ENST00000483925 ADAM23O75077 832 aa7.21□□□□□ -1.26
PTCD3-214ENST00000483925 AMPD1P23109 780 aa7.21□□□□□ -1.26
PTCD3-214ENST00000483925 SCNN1DP51172 638 aa7.21□□□□□ -1.26
PTCD3-214ENST00000483925 MFAP1P55081 439 aaKnown RBP7.21□□□□□ -1.26
PTCD3-214ENST00000483925 SLCO4C1Q6ZQN7 724 aa7.21□□□□□ -1.26
PTCD3-214ENST00000483925 NIFKQ9BYG3 293 aaKnown RBP7.21□□□□□ -1.26
PTCD3-214ENST00000483925 GDPD2Q9HCC8 539 aa7.21□□□□□ -1.26
PTCD3-214ENST00000483925 GGA1Q9UJY5 639 aa7.21□□□□□ -1.26
PTCD3-214ENST00000483925 MTMR7Q9Y216 660 aa7.21□□□□□ -1.26
PTCD3-214ENST00000483925 PCDHGC4Q9Y5F7 938 aa7.21□□□□□ -1.26
PTCD3-214ENST00000483925 PATL2C9JE40 543 aaKnown RBP7.2□□□□□ -1.26
PTCD3-214ENST00000483925 ABL2P42684 1182 aa7.2□□□□□ -1.26
PTCD3-214ENST00000483925 SMTNP53814 917 aa7.2□□□□□ -1.26
PTCD3-214ENST00000483925 NLRP8Q86W28 1048 aa7.2□□□□□ -1.26
PTCD3-214ENST00000483925 PLPP7Q8NBV4 271 aa7.2□□□□□ -1.26
PTCD3-214ENST00000483925 AIDAQ96BJ3 306 aa7.2□□□□□ -1.26
PTCD3-214ENST00000483925 ZCCHC2Q9C0B9 1178 aaKnown RBP7.2□□□□□ -1.26
PTCD3-214ENST00000483925 GZF1Q9H116 711 aaPredicted RBP7.2□□□□□ -1.26
PTCD3-214ENST00000483925 KRBA1A5PL33 1030 aa7.19□□□□□ -1.26
PTCD3-214ENST00000483925 PIK3R2O00459 728 aa7.19□□□□□ -1.26
PTCD3-214ENST00000483925 SEMA3FQ13275 785 aa7.19□□□□□ -1.26
PTCD3-214ENST00000483925 FNBP4Q8N3X1 1017 aaPredicted RBP7.19□□□□□ -1.26
PTCD3-214ENST00000483925 LOC105371045A0A1W2PR82 267 aa7.18□□□□□ -1.26
PTCD3-214ENST00000483925 ARAFP10398 606 aa7.18□□□□□ -1.26
PTCD3-214ENST00000483925 EPXP11678 715 aa7.18□□□□□ -1.26
PTCD3-214ENST00000483925 ATP4AP20648 1035 aa7.18□□□□□ -1.26
PTCD3-214ENST00000483925 COL8A1P27658 744 aa7.18□□□□□ -1.26
PTCD3-214ENST00000483925 SOX11P35716 441 aa7.18□□□□□ -1.26
PTCD3-214ENST00000483925 LINC00114Q6XXX2 140 aa7.18□□□□□ -1.26
PTCD3-214ENST00000483925 BTBD6Q96KE9 485 aa7.18□□□□□ -1.26
PTCD3-214ENST00000483925 DNAAF2Q9NVR5 837 aaKnown RBP7.18□□□□□ -1.26
PTCD3-214ENST00000483925 ATXN7O15265 892 aaPredicted RBP7.17□□□□□ -1.26
PTCD3-214ENST00000483925 PPP1R15AO75807 674 aaPredicted RBP7.17□□□□□ -1.26
PTCD3-214ENST00000483925 HOXB4P17483 251 aaPredicted RBP7.17□□□□□ -1.26
PTCD3-214ENST00000483925 NBPF1Q3BBV0 1214 aa7.17□□□□□ -1.26
PTCD3-214ENST00000483925 ARSJQ5FYB0 599 aaPredicted RBP7.17□□□□□ -1.26
PTCD3-214ENST00000483925 RETREG2Q8NC44 543 aa7.17□□□□□ -1.26
PTCD3-214ENST00000483925 SLC4A9Q96Q91 983 aa7.17□□□□□ -1.26
PTCD3-214ENST00000483925 SERTAD1Q9UHV2 236 aa7.17□□□□□ -1.26
PTCD3-214ENST00000483925 ACIN1Q9UKV3 1341 aaKnown RBP7.17□□□□□ -1.26
PTCD3-214ENST00000483925 A0A1W2PNR3 127 aa7.16□□□□□ -1.26
PTCD3-214ENST00000483925 A6NJY4 79 aa7.16□□□□□ -1.26
PTCD3-214ENST00000483925 NEURL1BA8MQ27 555 aa7.16□□□□□ -1.26
PTCD3-214ENST00000483925 CDK2AP1O14519 115 aa7.16□□□□□ -1.26
PTCD3-214ENST00000483925 GNB5O14775 395 aa7.16□□□□□ -1.26
PTCD3-214ENST00000483925 GRIN2CQ14957 1233 aa7.16□□□□□ -1.26
PTCD3-214ENST00000483925 TMEM229AB2RXF0 380 aa7.15□□□□□ -1.26
PTCD3-214ENST00000483925 TATP17735 454 aaPredicted RBP7.15□□□□□ -1.26
PTCD3-214ENST00000483925 BAG6P46379 1132 aa7.15□□□□□ -1.26
PTCD3-214ENST00000483925 RBM25P49756 843 aaKnown RBP7.15□□□□□ -1.26
PTCD3-214ENST00000483925 TNP2Q05952 138 aa7.15□□□□□ -1.26
PTCD3-214ENST00000483925 MTFR1Q15390 333 aa7.15□□□□□ -1.26
PTCD3-214ENST00000483925 FAM182BQ5T319 152 aa7.15□□□□□ -1.26
PTCD3-214ENST00000483925 SUV39H2Q9H5I1 410 aa7.15□□□□□ -1.26
PTCD3-214ENST00000483925 ZDHHC3Q9NYG2 299 aa7.15□□□□□ -1.26
PTCD3-214ENST00000483925 E9PSI1 815 aa7.14□□□□□ -1.27
PTCD3-214ENST00000483925 K7ELQ4 463 aaPredicted RBP7.14□□□□□ -1.27
PTCD3-214ENST00000483925 HMGB1P09429 215 aaKnown RBP7.14□□□□□ -1.27
PTCD3-214ENST00000483925 MAPTP10636 758 aaKnown RBP7.14□□□□□ -1.27
PTCD3-214ENST00000483925 ZNF295-AS1Q8N0V1 137 aa7.14□□□□□ -1.27
PTCD3-214ENST00000483925 AVENQ9NQS1 362 aaPredicted RBP7.14□□□□□ -1.27
PTCD3-214ENST00000483925 CABP1Q9NZU7 370 aa7.14□□□□□ -1.27
PTCD3-214ENST00000483925 IQSEC3Q9UPP2 1182 aaPredicted RBP7.14□□□□□ -1.27
PTCD3-214ENST00000483925 GJA3Q9Y6H8 435 aa7.14□□□□□ -1.27
PTCD3-214ENST00000483925 DCDC2BA2VCK2 349 aa7.13□□□□□ -1.27
PTCD3-214ENST00000483925 KHNYNO15037 678 aaKnown RBP7.13□□□□□ -1.27
PTCD3-214ENST00000483925 CD33P20138 364 aa7.13□□□□□ -1.27
PTCD3-214ENST00000483925 ADH6P28332 368 aa7.13□□□□□ -1.27
PTCD3-214ENST00000483925 DGKGP49619 791 aa7.13□□□□□ -1.27
PTCD3-214ENST00000483925 ZIC5Q96T25 663 aa7.13□□□□□ -1.27
PTCD3-214ENST00000483925 NOP53Q9NZM5 478 aaKnown RBP7.13□□□□□ -1.27
PTCD3-214ENST00000483925 PCDHGA11Q9Y5H2 935 aa7.13□□□□□ -1.27
PTCD3-214ENST00000483925 BACH1O14867 736 aa7.12□□□□□ -1.27
PTCD3-214ENST00000483925 IGSF3O75054 1194 aa7.12□□□□□ -1.27
PTCD3-214ENST00000483925 EML3Q32P44 896 aa7.12□□□□□ -1.27
PTCD3-214ENST00000483925 CHSY3Q70JA7 882 aa7.12□□□□□ -1.27
PTCD3-214ENST00000483925 FOXD4L4Q8WXT5 416 aaPredicted RBP7.12□□□□□ -1.27
PTCD3-214ENST00000483925 POM121Q96HA1 1249 aa7.12□□□□□ -1.27
PTCD3-214ENST00000483925 HCN2Q9UL51 889 aa7.12□□□□□ -1.27
PTCD3-214ENST00000483925 NOD1Q9Y239 953 aa7.12□□□□□ -1.27
PTCD3-214ENST00000483925 PIK3CDO00329 1044 aa7.11□□□□□ -1.27
PTCD3-214ENST00000483925 LZTS3O60299 673 aaPredicted RBP7.11□□□□□ -1.27
PTCD3-214ENST00000483925 FAM157BP0CG42 384 aa7.11□□□□□ -1.27
PTCD3-214ENST00000483925 BICDL1Q6ZP65 573 aa7.11□□□□□ -1.27
PTCD3-214ENST00000483925 KLF15Q9UIH9 416 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms