RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 MORC1Q86VD1 984 aa17.69■□□□□ 0.42
UBR4-213ENST00000483922 C16orf71Q8IYS4 520 aaPredicted RBP17.69■□□□□ 0.42
UBR4-213ENST00000483922 SLC52A2Q9HAB3 445 aa17.69■□□□□ 0.42
UBR4-213ENST00000483922 POTECB2RU33 542 aa17.68■□□□□ 0.42
UBR4-213ENST00000483922 NARFQ9UHQ1 456 aa17.68■□□□□ 0.42
UBR4-213ENST00000483922 RNMTO43148 476 aaKnown RBP17.67■□□□□ 0.42
UBR4-213ENST00000483922 TRIM26Q12899 539 aaPredicted RBP17.67■□□□□ 0.42
UBR4-213ENST00000483922 AKAP4Q5JQC9 854 aa17.67■□□□□ 0.42
UBR4-213ENST00000483922 ZBTB1Q9Y2K1 713 aa17.67■□□□□ 0.42
UBR4-213ENST00000483922 AFDNP55196 1824 aaKnown RBP17.67■□□□□ 0.42
UBR4-213ENST00000483922 NRXN2Q9P2S2 1712 aa17.67■□□□□ 0.42
UBR4-213ENST00000483922 ZPR1O75312 459 aa17.66■□□□□ 0.42
UBR4-213ENST00000483922 CARMIL3Q8ND23 1372 aa17.66■□□□□ 0.42
UBR4-213ENST00000483922 SERPINB2P05120 415 aa17.65■□□□□ 0.42
UBR4-213ENST00000483922 GLTPD2A6NH11 291 aa17.64■□□□□ 0.41
UBR4-213ENST00000483922 NFKBIEO00221 500 aa17.64■□□□□ 0.41
UBR4-213ENST00000483922 MTHFSDQ2M296 383 aaKnown RBP17.64■□□□□ 0.41
UBR4-213ENST00000483922 SMC1BQ8NDV3 1235 aa17.64■□□□□ 0.41
UBR4-213ENST00000483922 TNRC6CQ9HCJ0 1690 aaKnown RBP17.64■□□□□ 0.41
UBR4-213ENST00000483922 HMOX1P09601 288 aa17.63■□□□□ 0.41
UBR4-213ENST00000483922 LMNB1P20700 586 aa17.63■□□□□ 0.41
UBR4-213ENST00000483922 EIF4G2P78344 907 aaKnown RBP eCLIP17.63■□□□□ 0.41
UBR4-213ENST00000483922 AMER1Q5JTC6 1135 aaPredicted RBP17.63■□□□□ 0.41
UBR4-213ENST00000483922 COL15A1P39059 1388 aa17.63■□□□□ 0.41
UBR4-213ENST00000483922 MRC1P22897 1456 aa17.63■□□□□ 0.41
UBR4-213ENST00000483922 VEGFAP15692 232 aaPredicted RBP17.61■□□□□ 0.41
UBR4-213ENST00000483922 C2CD5Q86YS7 1000 aa17.61■□□□□ 0.41
UBR4-213ENST00000483922 TTLL6Q8N841 843 aa17.61■□□□□ 0.41
UBR4-213ENST00000483922 DLEC1Q9Y238 1755 aa17.61■□□□□ 0.41
UBR4-213ENST00000483922 CANXP27824 592 aaKnown RBP17.6■□□□□ 0.41
UBR4-213ENST00000483922 EIF5P55010 431 aaKnown RBP17.6■□□□□ 0.41
UBR4-213ENST00000483922 CCDC24Q8N4L8 307 aa17.6■□□□□ 0.41
UBR4-213ENST00000483922 ZC3H4Q9UPT8 1303 aaKnown RBP17.6■□□□□ 0.41
UBR4-213ENST00000483922 CAPN15O75808 1086 aa17.59■□□□□ 0.41
UBR4-213ENST00000483922 TBC1D9BQ66K14 1250 aa17.59■□□□□ 0.41
UBR4-213ENST00000483922 BICDL1Q6ZP65 573 aa17.59■□□□□ 0.41
UBR4-213ENST00000483922 VSIG10Q8N0Z9 540 aa17.59■□□□□ 0.41
UBR4-213ENST00000483922 KNSTRNQ9Y448 316 aa17.58■□□□□ 0.4
UBR4-213ENST00000483922 CCDC88AQ3V6T2 1871 aa17.58■□□□□ 0.4
UBR4-213ENST00000483922 H0YIN7 160 aa17.57■□□□□ 0.4
UBR4-213ENST00000483922 TNS4Q8IZW8 715 aa17.57■□□□□ 0.4
UBR4-213ENST00000483922 ANKRD31Q8N7Z5 1873 aa17.56■□□□□ 0.4
UBR4-213ENST00000483922 VIRMAQ69YN4 1812 aaKnown RBP17.56■□□□□ 0.4
UBR4-213ENST00000483922 PER1O15534 1290 aaPredicted RBP17.56■□□□□ 0.4
UBR4-213ENST00000483922 HSPA1AP0DMV8 641 aaKnown RBP17.56■□□□□ 0.4
UBR4-213ENST00000483922 HSPA1BP0DMV9 641 aaKnown RBP17.56■□□□□ 0.4
UBR4-213ENST00000483922 IL17REQ8NFR9 667 aa17.56■□□□□ 0.4
UBR4-213ENST00000483922 PCGF6Q9BYE7 350 aa17.56■□□□□ 0.4
UBR4-213ENST00000483922 UBR2Q8IWV8 1755 aa17.56■□□□□ 0.4
UBR4-213ENST00000483922 C21orf2O43822 256 aa17.55■□□□□ 0.4
UBR4-213ENST00000483922 POTEIP0CG38 1075 aa17.55■□□□□ 0.4
UBR4-213ENST00000483922 POTEJP0CG39 1038 aa17.55■□□□□ 0.4
UBR4-213ENST00000483922 PRR5LQ6MZQ0 368 aa17.55■□□□□ 0.4
UBR4-213ENST00000483922 ZNF496Q96IT1 587 aaPredicted RBP17.55■□□□□ 0.4
UBR4-213ENST00000483922 ZNF219Q9P2Y4 722 aaPredicted RBP17.55■□□□□ 0.4
UBR4-213ENST00000483922 TBC1D2BQ9UPU7 963 aa17.55■□□□□ 0.4
UBR4-213ENST00000483922 TIAM2Q8IVF5 1701 aa17.55■□□□□ 0.4
UBR4-213ENST00000483922 CLSPNQ9HAW4 1339 aa17.54■□□□□ 0.4
UBR4-213ENST00000483922 ZNF622Q969S3 477 aaKnown RBP eCLIP17.53■□□□□ 0.48e-14■■□□□ 13.1
UBR4-213ENST00000483922 BRIP1Q9BX63 1249 aa17.53■□□□□ 0.4
UBR4-213ENST00000483922 COL11A2P13942 1736 aaPredicted RBP17.52■□□□□ 0.4
UBR4-213ENST00000483922 A1BGP04217 495 aa17.52■□□□□ 0.4
UBR4-213ENST00000483922 KCNQ3O43525 872 aa17.51■□□□□ 0.39
UBR4-213ENST00000483922 DIAPH1O60610 1272 aaKnown RBP17.51■□□□□ 0.39
UBR4-213ENST00000483922 DDNO94850 711 aaPredicted RBP17.51■□□□□ 0.39
UBR4-213ENST00000483922 FER1L6Q2WGJ9 1857 aa17.51■□□□□ 0.39
UBR4-213ENST00000483922 ZNF790Q6PG37 636 aa17.51■□□□□ 0.39
UBR4-213ENST00000483922 HEG1Q9ULI3 1381 aa17.51■□□□□ 0.39
UBR4-213ENST00000483922 STARD3NLO95772 234 aa17.5■□□□□ 0.39
UBR4-213ENST00000483922 ERFEQ4G0M1 354 aa17.5■□□□□ 0.39
UBR4-213ENST00000483922 KIF7Q2M1P5 1343 aa17.49■□□□□ 0.39
UBR4-213ENST00000483922 A0A087WZG4 1122 aa17.49■□□□□ 0.39
UBR4-213ENST00000483922 CAMTA2O94983 1202 aa17.49■□□□□ 0.39
UBR4-213ENST00000483922 PDE6BP35913 854 aa17.49■□□□□ 0.39
UBR4-213ENST00000483922 DPY19L2Q6NUT2 758 aa17.49■□□□□ 0.39
UBR4-213ENST00000483922 COL3A1P02461 1466 aaPredicted RBP17.49■□□□□ 0.39
UBR4-213ENST00000483922 SRGNP10124 158 aa17.48■□□□□ 0.39
UBR4-213ENST00000483922 IL6STP40189 918 aaPredicted RBP17.48■□□□□ 0.39
UBR4-213ENST00000483922 CC2D1BQ5T0F9 858 aaKnown RBP17.48■□□□□ 0.39
UBR4-213ENST00000483922 TTC5Q8N0Z6 440 aa17.48■□□□□ 0.39
UBR4-213ENST00000483922 C7orf43Q8WVR3 580 aa17.48■□□□□ 0.39
UBR4-213ENST00000483922 SLX4Q8IY92 1834 aa17.48■□□□□ 0.39
UBR4-213ENST00000483922 DICER1Q9UPY3 1922 aaKnown RBP17.47■□□□□ 0.39
UBR4-213ENST00000483922 PRAMEF22A3QJZ6 481 aa17.47■□□□□ 0.39
UBR4-213ENST00000483922 PIP4K2AP48426 406 aaPredicted RBP17.47■□□□□ 0.39
UBR4-213ENST00000483922 MKRN1Q9UHC7 482 aaKnown RBP17.47■□□□□ 0.39
UBR4-213ENST00000483922 USP16Q9Y5T5 823 aa17.47■□□□□ 0.39
UBR4-213ENST00000483922 SCN7AQ01118 1682 aa17.47■□□□□ 0.39
UBR4-213ENST00000483922 SIPA1L3O60292 1781 aaPredicted RBP17.47■□□□□ 0.39
UBR4-213ENST00000483922 LTBP3Q9NS15 1303 aa17.47■□□□□ 0.39
UBR4-213ENST00000483922 CHADLQ6NUI6 762 aa17.46■□□□□ 0.39
UBR4-213ENST00000483922 PHACTR3Q96KR7 559 aa17.46■□□□□ 0.39
UBR4-213ENST00000483922 ZNF330Q9Y3S2 320 aaPredicted RBP17.46■□□□□ 0.39
UBR4-213ENST00000483922 GNAT3A8MTJ3 354 aa17.45■□□□□ 0.38
UBR4-213ENST00000483922 STYK1Q6J9G0 422 aa17.45■□□□□ 0.38
UBR4-213ENST00000483922 PRPF40BQ6NWY9 871 aaKnown RBP17.45■□□□□ 0.38
UBR4-213ENST00000483922 TEX13AQ9BXU3 409 aaPredicted RBP17.45■□□□□ 0.38
UBR4-213ENST00000483922 CREBZFQ9NS37 354 aa17.45■□□□□ 0.38
UBR4-213ENST00000483922 PDZRN3Q9UPQ7 1066 aa17.45■□□□□ 0.38
UBR4-213ENST00000483922 CEMIPQ8WUJ3 1361 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms