RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 AMOTQ4VCS5 1084 aa15.01□□□□□ -0.01
SMARCC1-205ENST00000483847 DNAJC10Q8IXB1 793 aa15.01□□□□□ -0.01
SMARCC1-205ENST00000483847 SCN11AQ9UI33 1791 aa15.01□□□□□ -0.01
SMARCC1-205ENST00000483847 SOS1Q07889 1333 aaPredicted RBP15□□□□□ -0.01
SMARCC1-205ENST00000483847 POTECB2RU33 542 aa15□□□□□ -0.01
SMARCC1-205ENST00000483847 ZPR1O75312 459 aa15□□□□□ -0.01
SMARCC1-205ENST00000483847 NFIXQ14938 502 aa15□□□□□ -0.01
SMARCC1-205ENST00000483847 C1orf141Q5JVX7 400 aa15□□□□□ -0.01
SMARCC1-205ENST00000483847 NFKBIEO00221 500 aa14.99□□□□□ -0.01
SMARCC1-205ENST00000483847 CARMIL3Q8ND23 1372 aa14.98□□□□□ -0.01
SMARCC1-205ENST00000483847 POLR3GLQ9BT43 218 aa14.98□□□□□ -0.01
SMARCC1-205ENST00000483847 BCL2L12Q9HB09 334 aa14.98□□□□□ -0.01
SMARCC1-205ENST00000483847 SERPINB2P05120 415 aa14.97□□□□□ -0.01
SMARCC1-205ENST00000483847 CYP19A1P11511 503 aaPredicted RBP14.97□□□□□ -0.01
SMARCC1-205ENST00000483847 C2CD5Q86YS7 1000 aa14.97□□□□□ -0.01
SMARCC1-205ENST00000483847 TTLL6Q8N841 843 aa14.97□□□□□ -0.01
SMARCC1-205ENST00000483847 NARFQ9UHQ1 456 aa14.97□□□□□ -0.01
SMARCC1-205ENST00000483847 COL15A1P39059 1388 aa14.97□□□□□ -0.01
SMARCC1-205ENST00000483847 SULT6B1Q6IMI4 303 aa14.96□□□□□ -0.01
SMARCC1-205ENST00000483847 SLC39A6Q13433 755 aa14.95□□□□□ -0.02
SMARCC1-205ENST00000483847 LGR6Q9HBX8 967 aa14.95□□□□□ -0.02
SMARCC1-205ENST00000483847 ZBTB1Q9Y2K1 713 aa14.95□□□□□ -0.02
SMARCC1-205ENST00000483847 ANKRD31Q8N7Z5 1873 aa14.95□□□□□ -0.02
SMARCC1-205ENST00000483847 SLC52A2Q9HAB3 445 aa14.94□□□□□ -0.02
SMARCC1-205ENST00000483847 MKRN1Q9UHC7 482 aaKnown RBP14.94□□□□□ -0.02
SMARCC1-205ENST00000483847 COL11A2P13942 1736 aaPredicted RBP14.93□□□□□ -0.02
SMARCC1-205ENST00000483847 H0YIN7 160 aa14.93□□□□□ -0.02
SMARCC1-205ENST00000483847 POTEIP0CG38 1075 aa14.93□□□□□ -0.02
SMARCC1-205ENST00000483847 POTEJP0CG39 1038 aa14.93□□□□□ -0.02
SMARCC1-205ENST00000483847 ZNF219Q9P2Y4 722 aaPredicted RBP14.93□□□□□ -0.02
SMARCC1-205ENST00000483847 VIRMAQ69YN4 1812 aaKnown RBP14.93□□□□□ -0.02
SMARCC1-205ENST00000483847 DICER1Q9UPY3 1922 aaKnown RBP14.93□□□□□ -0.02
SMARCC1-205ENST00000483847 MRC1P22897 1456 aa14.93□□□□□ -0.02
SMARCC1-205ENST00000483847 FER1L6Q2WGJ9 1857 aa14.93□□□□□ -0.02
SMARCC1-205ENST00000483847 BICDL1Q6ZP65 573 aa14.92□□□□□ -0.02
SMARCC1-205ENST00000483847 FOXN1O15353 648 aa14.91□□□□□ -0.02
SMARCC1-205ENST00000483847 C21orf2O43822 256 aa14.91□□□□□ -0.02
SMARCC1-205ENST00000483847 IL13P35225 146 aa14.91□□□□□ -0.02
SMARCC1-205ENST00000483847 AKAP4Q5JQC9 854 aa14.91□□□□□ -0.02
SMARCC1-205ENST00000483847 DPY19L2Q6NUT2 758 aa14.91□□□□□ -0.02
SMARCC1-205ENST00000483847 CCDC24Q8N4L8 307 aa14.91□□□□□ -0.02
SMARCC1-205ENST00000483847 PANK3Q9H999 370 aa14.91□□□□□ -0.02
SMARCC1-205ENST00000483847 CREBZFQ9NS37 354 aa14.91□□□□□ -0.02
SMARCC1-205ENST00000483847 CANXP27824 592 aaKnown RBP14.9□□□□□ -0.02
SMARCC1-205ENST00000483847 ERFEQ4G0M1 354 aa14.9□□□□□ -0.02
SMARCC1-205ENST00000483847 CHADLQ6NUI6 762 aa14.9□□□□□ -0.02
SMARCC1-205ENST00000483847 ZNF622Q969S3 477 aaKnown RBP eCLIP14.9□□□□□ -0.026e-10■■□□□ 12.8
SMARCC1-205ENST00000483847 UBR2Q8IWV8 1755 aa14.89□□□□□ -0.03
SMARCC1-205ENST00000483847 RNMTO43148 476 aaKnown RBP14.89□□□□□ -0.03
SMARCC1-205ENST00000483847 DDNO94850 711 aaPredicted RBP14.89□□□□□ -0.03
SMARCC1-205ENST00000483847 TBC1D9BQ66K14 1250 aa14.89□□□□□ -0.03
SMARCC1-205ENST00000483847 MORC1Q86VD1 984 aa14.89□□□□□ -0.03
SMARCC1-205ENST00000483847 SCN7AQ01118 1682 aa14.87□□□□□ -0.03
SMARCC1-205ENST00000483847 CNTNAP1P78357 1384 aa14.87□□□□□ -0.03
SMARCC1-205ENST00000483847 CACNA1SQ13698 1873 aa14.87□□□□□ -0.03
SMARCC1-205ENST00000483847 EIF5P55010 431 aaKnown RBP14.87□□□□□ -0.03
SMARCC1-205ENST00000483847 PRR5LQ6MZQ0 368 aa14.87□□□□□ -0.03
SMARCC1-205ENST00000483847 SLX4Q8IY92 1834 aa14.87□□□□□ -0.03
SMARCC1-205ENST00000483847 HMOX1P09601 288 aa14.86□□□□□ -0.03
SMARCC1-205ENST00000483847 VSIG10Q8N0Z9 540 aa14.86□□□□□ -0.03
SMARCC1-205ENST00000483847 BRIP1Q9BX63 1249 aa14.86□□□□□ -0.03
SMARCC1-205ENST00000483847 PASKQ96RG2 1323 aa14.86□□□□□ -0.03
SMARCC1-205ENST00000483847 LTBP3Q9NS15 1303 aa14.86□□□□□ -0.03
SMARCC1-205ENST00000483847 PDE6BP35913 854 aa14.85□□□□□ -0.03
SMARCC1-205ENST00000483847 MTHFSDQ2M296 383 aaKnown RBP14.85□□□□□ -0.03
SMARCC1-205ENST00000483847 TAOK3Q9H2K8 898 aa14.85□□□□□ -0.03
SMARCC1-205ENST00000483847 VEGFBP49765 207 aa14.84□□□□□ -0.03
SMARCC1-205ENST00000483847 PRDM10Q9NQV6 1147 aa14.84□□□□□ -0.03
SMARCC1-205ENST00000483847 TBC1D2BQ9UPU7 963 aa14.84□□□□□ -0.03
SMARCC1-205ENST00000483847 PRPF40BQ6NWY9 871 aaKnown RBP14.83□□□□□ -0.04
SMARCC1-205ENST00000483847 ZNF330Q9Y3S2 320 aaPredicted RBP14.83□□□□□ -0.04
SMARCC1-205ENST00000483847 ARFGEF2Q9Y6D5 1785 aa14.83□□□□□ -0.04
SMARCC1-205ENST00000483847 A0A087WZG4 1122 aa14.82□□□□□ -0.04
SMARCC1-205ENST00000483847 STARD3NLO95772 234 aa14.82□□□□□ -0.04
SMARCC1-205ENST00000483847 ITGBL1O95965 494 aaPredicted RBP14.82□□□□□ -0.04
SMARCC1-205ENST00000483847 CTCFP49711 727 aaPredicted RBP14.82□□□□□ -0.04
SMARCC1-205ENST00000483847 LDHDQ86WU2 507 aa14.82□□□□□ -0.04
SMARCC1-205ENST00000483847 ZNF496Q96IT1 587 aaPredicted RBP14.82□□□□□ -0.04
SMARCC1-205ENST00000483847 TAF1DQ9H5J8 278 aaPredicted RBP14.82□□□□□ -0.04
SMARCC1-205ENST00000483847 PDZRN3Q9UPQ7 1066 aa14.82□□□□□ -0.04
SMARCC1-205ENST00000483847 SCN4AP35499 1836 aa14.81□□□□□ -0.04
SMARCC1-205ENST00000483847 SRGNP10124 158 aa14.81□□□□□ -0.04
SMARCC1-205ENST00000483847 LBX1P52954 281 aa14.81□□□□□ -0.04
SMARCC1-205ENST00000483847 TMEM88BA6NKF7 163 aa14.8□□□□□ -0.04
SMARCC1-205ENST00000483847 HSPA5P11021 654 aaKnown RBP14.8□□□□□ -0.04
SMARCC1-205ENST00000483847 STYK1Q6J9G0 422 aa14.8□□□□□ -0.04
SMARCC1-205ENST00000483847 TTC5Q8N0Z6 440 aa14.8□□□□□ -0.04
SMARCC1-205ENST00000483847 CNBD1Q8NA66 436 aa14.8□□□□□ -0.04
SMARCC1-205ENST00000483847 CNKSR1Q969H4 720 aa14.8□□□□□ -0.04
SMARCC1-205ENST00000483847 AIDAQ96BJ3 306 aa14.8□□□□□ -0.04
SMARCC1-205ENST00000483847 L3MBTL3Q96JM7 780 aaPredicted RBP14.8□□□□□ -0.04
SMARCC1-205ENST00000483847 WBP1LQ9NX94 342 aa14.8□□□□□ -0.04
SMARCC1-205ENST00000483847 HEG1Q9ULI3 1381 aa14.8□□□□□ -0.04
SMARCC1-205ENST00000483847 ADAMTSL1Q8N6G6 1762 aa14.8□□□□□ -0.04
SMARCC1-205ENST00000483847 IQCA1LA6NCM1 817 aa14.79□□□□□ -0.04
SMARCC1-205ENST00000483847 SLC34A2O95436 690 aa14.79□□□□□ -0.04
SMARCC1-205ENST00000483847 EAPPQ56P03 285 aaPredicted RBP14.79□□□□□ -0.04
SMARCC1-205ENST00000483847 BCORQ6W2J9 1755 aa14.79□□□□□ -0.04
SMARCC1-205ENST00000483847 ZNF541Q9H0D2 1346 aa14.79□□□□□ -0.04
SMARCC1-205ENST00000483847 SIPA1L3O60292 1781 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms