RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 POTEAQ6S8J7 498 aa21.8■■□□□ 1.08
MRPL28-210ENST00000483764 DZIP1LQ8IYY4 767 aaKnown RBP21.8■■□□□ 1.08
MRPL28-210ENST00000483764 VSIG10Q8N0Z9 540 aa21.8■■□□□ 1.08
MRPL28-210ENST00000483764 PANK1Q8TE04 598 aa21.8■■□□□ 1.08
MRPL28-210ENST00000483764 CLUAP1Q96AJ1 413 aa21.8■■□□□ 1.08
MRPL28-210ENST00000483764 CHPF2Q9P2E5 772 aa21.8■■□□□ 1.08
MRPL28-210ENST00000483764 UBR2Q8IWV8 1755 aa21.79■■□□□ 1.08
MRPL28-210ENST00000483764 RBM42Q9BTD8 480 aaKnown RBP21.79■■□□□ 1.08
MRPL28-210ENST00000483764 API5Q9BZZ5 524 aaKnown RBP21.79■■□□□ 1.08
MRPL28-210ENST00000483764 PTPRCP08575 1304 aa21.79■■□□□ 1.08
MRPL28-210ENST00000483764 KAT6BQ8WYB5 2073 aa21.78■■□□□ 1.08
MRPL28-210ENST00000483764 G2E3Q7L622 706 aa21.78■■□□□ 1.08
MRPL28-210ENST00000483764 FTSJ3Q8IY81 847 aaKnown RBP21.78■■□□□ 1.08
MRPL28-210ENST00000483764 CRBNQ96SW2 442 aa21.78■■□□□ 1.08
MRPL28-210ENST00000483764 ANP32EQ9BTT0 268 aa21.78■■□□□ 1.08
MRPL28-210ENST00000483764 RLBP1P12271 317 aa21.77■■□□□ 1.08
MRPL28-210ENST00000483764 SMARCC1Q92922 1105 aaPredicted RBP21.77■■□□□ 1.08
MRPL28-210ENST00000483764 TEX13AQ9BXU3 409 aaPredicted RBP21.77■■□□□ 1.08
MRPL28-210ENST00000483764 FAM196AQ6ZSG2 479 aa21.76■■□□□ 1.07
MRPL28-210ENST00000483764 DDX21Q9NR30 783 aaKnown RBP eCLIP21.76■■□□□ 1.07
MRPL28-210ENST00000483764 FLIIQ13045 1269 aa21.75■■□□□ 1.07
MRPL28-210ENST00000483764 C5P01031 1676 aa21.75■■□□□ 1.07
MRPL28-210ENST00000483764 ANXA1P04083 346 aa21.75■■□□□ 1.07
MRPL28-210ENST00000483764 PDIA6Q15084 440 aa21.75■■□□□ 1.07
MRPL28-210ENST00000483764 CENPQQ7L2Z9 268 aaPredicted RBP21.75■■□□□ 1.07
MRPL28-210ENST00000483764 PTF1AQ7RTS3 328 aa21.75■■□□□ 1.07
MRPL28-210ENST00000483764 PHAXQ9H814 394 aaKnown RBP21.75■■□□□ 1.07
MRPL28-210ENST00000483764 HYPKQ9NX55 129 aa21.75■■□□□ 1.07
MRPL28-210ENST00000483764 COG6Q9Y2V7 657 aa21.75■■□□□ 1.07
MRPL28-210ENST00000483764 PROSER3Q2NL68 480 aa21.74■■□□□ 1.07
MRPL28-210ENST00000483764 SLC4A9Q96Q91 983 aa21.74■■□□□ 1.07
MRPL28-210ENST00000483764 PALLDQ8WX93 1383 aa21.73■■□□□ 1.07
MRPL28-210ENST00000483764 ERBB4Q15303 1308 aa21.73■■□□□ 1.07
MRPL28-210ENST00000483764 DNAJC10Q8IXB1 793 aa21.73■■□□□ 1.07
MRPL28-210ENST00000483764 FKBP5Q13451 457 aaPredicted RBP21.72■■□□□ 1.07
MRPL28-210ENST00000483764 ABCC4O15439 1325 aa21.71■■□□□ 1.07
MRPL28-210ENST00000483764 LOC102724428A0A0B4J2F2 783 aa21.71■■□□□ 1.07
MRPL28-210ENST00000483764 STARD3NLO95772 234 aa21.71■■□□□ 1.07
MRPL28-210ENST00000483764 SIK1P57059 783 aa21.71■■□□□ 1.07
MRPL28-210ENST00000483764 TMEM57Q8N5G2 664 aa21.71■■□□□ 1.07
MRPL28-210ENST00000483764 BCL11BQ9C0K0 894 aaPredicted RBP21.71■■□□□ 1.07
MRPL28-210ENST00000483764 BRWD3Q6RI45 1802 aa21.71■■□□□ 1.07
MRPL28-210ENST00000483764 MYL6BP14649 208 aa21.7■■□□□ 1.07
MRPL28-210ENST00000483764 MVPQ14764 893 aaKnown RBP21.7■■□□□ 1.07
MRPL28-210ENST00000483764 NHSQ6T4R5 1651 aa21.7■■□□□ 1.06
MRPL28-210ENST00000483764 RGS12O14924 1447 aa21.7■■□□□ 1.06
MRPL28-210ENST00000483764 A1BGP04217 495 aa21.7■■□□□ 1.06
MRPL28-210ENST00000483764 ATP6V1AP38606 617 aa21.69■■□□□ 1.06
MRPL28-210ENST00000483764 ITPRIPQ8IWB1 547 aa21.69■■□□□ 1.06
MRPL28-210ENST00000483764 CACNA1FO60840 1977 aa21.69■■□□□ 1.06
MRPL28-210ENST00000483764 LAMB4A4D0S4 1761 aa21.69■■□□□ 1.06
MRPL28-210ENST00000483764 NBPF26B4DH59 902 aa21.68■■□□□ 1.06
MRPL28-210ENST00000483764 F6X3S4 739 aa21.68■■□□□ 1.06
MRPL28-210ENST00000483764 CYP19A1P11511 503 aaPredicted RBP21.68■■□□□ 1.06
MRPL28-210ENST00000483764 ANP32AP39687 249 aaKnown RBP21.68■■□□□ 1.06
MRPL28-210ENST00000483764 PIP4K2AP48426 406 aaPredicted RBP21.68■■□□□ 1.06
MRPL28-210ENST00000483764 NBPF14Q5TI25 921 aa21.68■■□□□ 1.06
MRPL28-210ENST00000483764 NBPF10Q6P3W6 841 aaKnown RBP21.68■■□□□ 1.06
MRPL28-210ENST00000483764 LRP10Q7Z4F1 713 aa21.68■■□□□ 1.06
MRPL28-210ENST00000483764 NBPF15Q8N660 670 aa21.68■■□□□ 1.06
MRPL28-210ENST00000483764 INTS3Q68E01 1043 aaKnown RBP21.67■■□□□ 1.06
MRPL28-210ENST00000483764 KDM2BQ8NHM5 1336 aa21.67■■□□□ 1.06
MRPL28-210ENST00000483764 DDX19BQ9UMR2 479 aa21.66■■□□□ 1.06
MRPL28-210ENST00000483764 TRIM37O94972 964 aa21.65■■□□□ 1.06
MRPL28-210ENST00000483764 DDX58O95786 925 aaKnown RBP21.65■■□□□ 1.06
MRPL28-210ENST00000483764 AIMP1Q12904 312 aaKnown RBP21.65■■□□□ 1.06
MRPL28-210ENST00000483764 SLC4A10Q6U841 1118 aa21.65■■□□□ 1.06
MRPL28-210ENST00000483764 COPS6Q7L5N1 327 aa21.65■■□□□ 1.06
MRPL28-210ENST00000483764 XAGE3Q8WTP9 111 aa21.65■■□□□ 1.06
MRPL28-210ENST00000483764 SBF2Q86WG5 1849 aa21.65■■□□□ 1.06
MRPL28-210ENST00000483764 PI4KAP2A4QPH2 592 aa21.65■■□□□ 1.06
MRPL28-210ENST00000483764 ITPK1Q13572 414 aa21.65■■□□□ 1.06
MRPL28-210ENST00000483764 KSR2Q6VAB6 950 aa21.65■■□□□ 1.06
MRPL28-210ENST00000483764 ERICH6Q7L0X2 663 aa21.65■■□□□ 1.06
MRPL28-210ENST00000483764 PI4KAP1Q8N8J0 262 aa21.65■■□□□ 1.06
MRPL28-210ENST00000483764 BTAF1O14981 1849 aa21.64■■□□□ 1.05
MRPL28-210ENST00000483764 CCT4P50991 539 aaKnown RBP21.64■■□□□ 1.05
MRPL28-210ENST00000483764 DNAAF4Q8WXU2 420 aa21.63■■□□□ 1.05
MRPL28-210ENST00000483764 ADCY9O60503 1353 aa21.62■■□□□ 1.05
MRPL28-210ENST00000483764 TJP1Q07157 1748 aa21.62■■□□□ 1.05
MRPL28-210ENST00000483764 ANKRD13DQ6ZTN6 518 aa21.61■■□□□ 1.05
MRPL28-210ENST00000483764 CHMP4BQ9H444 224 aaKnown RBP21.61■■□□□ 1.05
MRPL28-210ENST00000483764 MAP3K2Q9Y2U5 619 aa21.61■■□□□ 1.05
MRPL28-210ENST00000483764 ZBTB7BO15156 539 aaPredicted RBP21.6■■□□□ 1.05
MRPL28-210ENST00000483764 RIC3Q7Z5B4 369 aa21.6■■□□□ 1.05
MRPL28-210ENST00000483764 CCDC87Q9NVE4 849 aa21.6■■□□□ 1.05
MRPL28-210ENST00000483764 ZBTB1Q9Y2K1 713 aa21.6■■□□□ 1.05
MRPL28-210ENST00000483764 CRKLP46109 303 aaKnown RBP21.6■■□□□ 1.05
MRPL28-210ENST00000483764 INTS5Q6P9B9 1019 aaKnown RBP21.6■■□□□ 1.05
MRPL28-210ENST00000483764 CCNL1Q9UK58 526 aaPredicted RBP21.6■■□□□ 1.05
MRPL28-210ENST00000483764 CICQ96RK0 1608 aaPredicted RBP21.59■■□□□ 1.05
MRPL28-210ENST00000483764 KCNQ4P56696 695 aa21.59■■□□□ 1.05
MRPL28-210ENST00000483764 ZBTB40Q9NUA8 1239 aa21.59■■□□□ 1.05
MRPL28-210ENST00000483764 PXDNLA1KZ92 1463 aa21.59■■□□□ 1.05
MRPL28-210ENST00000483764 ZNF831Q5JPB2 1677 aa21.59■■□□□ 1.05
MRPL28-210ENST00000483764 IL6STP40189 918 aaPredicted RBP21.58■■□□□ 1.04
MRPL28-210ENST00000483764 TTLL7Q6ZT98 887 aa21.58■■□□□ 1.04
MRPL28-210ENST00000483764 LINC00116Q8NCU8 138 aa21.58■■□□□ 1.04
MRPL28-210ENST00000483764 PLBD2Q8NHP8 589 aa21.58■■□□□ 1.04
MRPL28-210ENST00000483764 BACH2Q9BYV9 841 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms