RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 APAF1O14727 1248 aa12.7□□□□□ -0.38
HMG20B-210ENST00000483417 TM4SF1P30408 202 aa12.7□□□□□ -0.38
HMG20B-210ENST00000483417 FKBP8Q14318 412 aa12.7□□□□□ -0.38
HMG20B-210ENST00000483417 NEUROD2Q15784 382 aa12.7□□□□□ -0.38
HMG20B-210ENST00000483417 ZNF790Q6PG37 636 aa12.7□□□□□ -0.38
HMG20B-210ENST00000483417 RUNDC1Q96C34 613 aa12.7□□□□□ -0.38
HMG20B-210ENST00000483417 ZNF496Q96IT1 587 aaPredicted RBP12.7□□□□□ -0.38
HMG20B-210ENST00000483417 GOLGB1Q14789 3259 aaKnown RBP12.7□□□□□ -0.38
HMG20B-210ENST00000483417 C4AP0C0L4 1744 aa12.69□□□□□ -0.38
HMG20B-210ENST00000483417 TMPOP42166 694 aaKnown RBP12.69□□□□□ -0.38
HMG20B-210ENST00000483417 TGFB2P61812 414 aa12.69□□□□□ -0.38
HMG20B-210ENST00000483417 THUMPD2Q9BTF0 503 aaKnown RBP12.69□□□□□ -0.38
HMG20B-210ENST00000483417 SIPA1L3O60292 1781 aaPredicted RBP12.69□□□□□ -0.38
HMG20B-210ENST00000483417 UBR2Q8IWV8 1755 aa12.69□□□□□ -0.38
HMG20B-210ENST00000483417 KCNQ3O43525 872 aa12.68□□□□□ -0.38
HMG20B-210ENST00000483417 RIPK4P57078 832 aa12.68□□□□□ -0.38
HMG20B-210ENST00000483417 DDR1Q08345 913 aa12.68□□□□□ -0.38
HMG20B-210ENST00000483417 TEFQ10587 303 aa12.68□□□□□ -0.38
HMG20B-210ENST00000483417 NFE2L2Q16236 605 aa12.68□□□□□ -0.38
HMG20B-210ENST00000483417 MCM10Q7L590 875 aa12.68□□□□□ -0.38
HMG20B-210ENST00000483417 BCL2L12Q9HB09 334 aa12.68□□□□□ -0.38
HMG20B-210ENST00000483417 ZBTB1Q9Y2K1 713 aa12.68□□□□□ -0.38
HMG20B-210ENST00000483417 SALL2Q9Y467 1007 aaPredicted RBP12.68□□□□□ -0.38
HMG20B-210ENST00000483417 KIF13BQ9NQT8 1826 aa12.67□□□□□ -0.38
HMG20B-210ENST00000483417 KCNA3P22001 575 aa12.67□□□□□ -0.38
HMG20B-210ENST00000483417 EIF5P55010 431 aaKnown RBP12.67□□□□□ -0.38
HMG20B-210ENST00000483417 NARFQ9UHQ1 456 aa12.67□□□□□ -0.38
HMG20B-210ENST00000483417 TRIM35Q9UPQ4 493 aa12.67□□□□□ -0.38
HMG20B-210ENST00000483417 C10orf71Q711Q0 1435 aa12.67□□□□□ -0.38
HMG20B-210ENST00000483417 KIAA1551Q9HCM1 1747 aa12.67□□□□□ -0.38
HMG20B-210ENST00000483417 HEG1Q9ULI3 1381 aa12.67□□□□□ -0.38
HMG20B-210ENST00000483417 PXDNLA1KZ92 1463 aa12.66□□□□□ -0.38
HMG20B-210ENST00000483417 A0A0G2JLW4 131 aa12.66□□□□□ -0.38
HMG20B-210ENST00000483417 HTATSF1O43719 755 aaKnown RBP12.66□□□□□ -0.38
HMG20B-210ENST00000483417 STARD3NLO95772 234 aa12.66□□□□□ -0.38
HMG20B-210ENST00000483417 USPL1Q5W0Q7 1092 aa12.66□□□□□ -0.38
HMG20B-210ENST00000483417 TTC5Q8N0Z6 440 aa12.66□□□□□ -0.38
HMG20B-210ENST00000483417 TEX13AQ9BXU3 409 aaPredicted RBP12.66□□□□□ -0.38
HMG20B-210ENST00000483417 PNNQ9H307 717 aaKnown RBP12.66□□□□□ -0.38
HMG20B-210ENST00000483417 PARP3Q9Y6F1 533 aa12.66□□□□□ -0.38
HMG20B-210ENST00000483417 BTBD11A6QL63 1104 aa12.65□□□□□ -0.38
HMG20B-210ENST00000483417 POLRMTO00411 1230 aaKnown RBP12.65□□□□□ -0.38
HMG20B-210ENST00000483417 MIS18AQ9NYP9 233 aa12.65□□□□□ -0.38
HMG20B-210ENST00000483417 MAPK8IP3Q9UPT6 1336 aa12.64□□□□□ -0.39
HMG20B-210ENST00000483417 ZPR1O75312 459 aa12.64□□□□□ -0.39
HMG20B-210ENST00000483417 DPEP1P16444 411 aa12.64□□□□□ -0.39
HMG20B-210ENST00000483417 CANXP27824 592 aaKnown RBP12.64□□□□□ -0.39
HMG20B-210ENST00000483417 NFIXQ14938 502 aa12.64□□□□□ -0.39
HMG20B-210ENST00000483417 FMNL2Q96PY5 1086 aa12.64□□□□□ -0.39
HMG20B-210ENST00000483417 WWC3Q9ULE0 1092 aa12.64□□□□□ -0.39
HMG20B-210ENST00000483417 USP16Q9Y5T5 823 aa12.63□□□□□ -0.39
HMG20B-210ENST00000483417 COL15A1P39059 1388 aa12.63□□□□□ -0.39
HMG20B-210ENST00000483417 A1BGP04217 495 aa12.62□□□□□ -0.39
HMG20B-210ENST00000483417 NEFMP07197 916 aa12.62□□□□□ -0.39
HMG20B-210ENST00000483417 IL6STP40189 918 aaPredicted RBP12.62□□□□□ -0.39
HMG20B-210ENST00000483417 RTF1Q92541 710 aaKnown RBP12.62□□□□□ -0.39
HMG20B-210ENST00000483417 N4BP2Q86UW6 1770 aaPredicted RBP12.61□□□□□ -0.39
HMG20B-210ENST00000483417 ADCY9O60503 1353 aa12.61□□□□□ -0.39
HMG20B-210ENST00000483417 PRAMEF22A3QJZ6 481 aa12.61□□□□□ -0.39
HMG20B-210ENST00000483417 TAF7Q15545 349 aaPredicted RBP12.61□□□□□ -0.39
HMG20B-210ENST00000483417 A0A087WZG4 1122 aa12.6□□□□□ -0.39
HMG20B-210ENST00000483417 SERPINB2P05120 415 aa12.6□□□□□ -0.39
HMG20B-210ENST00000483417 BCS1LQ9Y276 419 aa12.6□□□□□ -0.39
HMG20B-210ENST00000483417 BRCA1P38398 1863 aaKnown RBP12.59□□□□□ -0.39
HMG20B-210ENST00000483417 DLG5Q8TDM6 1919 aa12.59□□□□□ -0.39
HMG20B-210ENST00000483417 SNRPA1P09661 255 aaKnown RBP12.59□□□□□ -0.39
HMG20B-210ENST00000483417 CHRNA5P30532 468 aa12.59□□□□□ -0.39
HMG20B-210ENST00000483417 WWC1Q8IX03 1113 aa12.59□□□□□ -0.39
HMG20B-210ENST00000483417 SPINK5Q9NQ38 1064 aaPredicted RBP12.59□□□□□ -0.39
HMG20B-210ENST00000483417 PIM2Q9P1W9 311 aa12.59□□□□□ -0.39
HMG20B-210ENST00000483417 TBC1D2BQ9UPU7 963 aa12.59□□□□□ -0.39
HMG20B-210ENST00000483417 NRXN2Q9P2S2 1712 aa12.59□□□□□ -0.39
HMG20B-210ENST00000483417 NBPF26B4DH59 902 aa12.58□□□□□ -0.4
HMG20B-210ENST00000483417 CAMTA2O94983 1202 aa12.58□□□□□ -0.4
HMG20B-210ENST00000483417 C1QTNF8P60827 252 aa12.58□□□□□ -0.4
HMG20B-210ENST00000483417 TBC1D9BQ66K14 1250 aa12.58□□□□□ -0.4
HMG20B-210ENST00000483417 NBPF10Q6P3W6 841 aaKnown RBP12.58□□□□□ -0.4
HMG20B-210ENST00000483417 NBPF15Q8N660 670 aa12.58□□□□□ -0.4
HMG20B-210ENST00000483417 ATP10DQ9P241 1426 aa12.57□□□□□ -0.4
HMG20B-210ENST00000483417 LAS1LQ9Y4W2 734 aaKnown RBP12.57□□□□□ -0.4
HMG20B-210ENST00000483417 AFDNP55196 1824 aaKnown RBP12.57□□□□□ -0.4
HMG20B-210ENST00000483417 PIP4K2AP48426 406 aaPredicted RBP12.56□□□□□ -0.4
HMG20B-210ENST00000483417 DALRD3Q5D0E6 543 aaKnown RBP12.56□□□□□ -0.4
HMG20B-210ENST00000483417 ARHGAP27Q6ZUM4 889 aa12.56□□□□□ -0.4
HMG20B-210ENST00000483417 CHL1O00533 1208 aa12.55□□□□□ -0.4
HMG20B-210ENST00000483417 GIGYF1O75420 1035 aaPredicted RBP12.55□□□□□ -0.4
HMG20B-210ENST00000483417 ZNF853P0CG23 659 aa12.55□□□□□ -0.4
HMG20B-210ENST00000483417 EIF4A1P60842 406 aaKnown RBP12.55□□□□□ -0.4
HMG20B-210ENST00000483417 BICDL1Q6ZP65 573 aa12.55□□□□□ -0.4
HMG20B-210ENST00000483417 CARMIL3Q8ND23 1372 aa12.55□□□□□ -0.4
HMG20B-210ENST00000483417 CCDC27Q2M243 656 aa12.54□□□□□ -0.4
HMG20B-210ENST00000483417 KRT24Q2M2I5 525 aa12.54□□□□□ -0.4
HMG20B-210ENST00000483417 PRR5LQ6MZQ0 368 aa12.54□□□□□ -0.4
HMG20B-210ENST00000483417 CLEC4GQ6UXB4 293 aa12.54□□□□□ -0.4
HMG20B-210ENST00000483417 DZIP3Q86Y13 1208 aaKnown RBP12.54□□□□□ -0.4
HMG20B-210ENST00000483417 CDCA7LQ96GN5 454 aa12.54□□□□□ -0.4
HMG20B-210ENST00000483417 BRIP1Q9BX63 1249 aa12.54□□□□□ -0.4
HMG20B-210ENST00000483417 ZNF330Q9Y3S2 320 aaPredicted RBP12.54□□□□□ -0.4
HMG20B-210ENST00000483417 ARFGEF1Q9Y6D6 1849 aa12.53□□□□□ -0.4
HMG20B-210ENST00000483417 RGL2O15211 777 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms