RNA–Protein interactions for RNA: ENST00000482071.1

NCK1-208, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-208ENST00000482071 TERF2IPQ9NYB0 399 aa8.56□□□□□ -1.04
NCK1-208ENST00000482071 CABP1Q9NZU7 370 aa8.56□□□□□ -1.04
NCK1-208ENST00000482071 PKD2L1Q9P0L9 805 aa8.56□□□□□ -1.04
NCK1-208ENST00000482071 POLR3AO14802 1390 aaPredicted RBP8.56□□□□□ -1.04
NCK1-208ENST00000482071 XIRP1Q702N8 1843 aaKnown RBP8.56□□□□□ -1.04
NCK1-208ENST00000482071 PPIP5K1Q6PFW1 1433 aa8.55□□□□□ -1.04
NCK1-208ENST00000482071 ADGRL3Q9HAR2 1447 aa8.55□□□□□ -1.04
NCK1-208ENST00000482071 PPP2R1AP30153 589 aa8.55□□□□□ -1.04
NCK1-208ENST00000482071 RPIAP49247 311 aa8.55□□□□□ -1.04
NCK1-208ENST00000482071 FCF1Q9Y324 198 aaKnown RBP8.55□□□□□ -1.04
NCK1-208ENST00000482071 CGNL1Q0VF96 1302 aa8.54□□□□□ -1.04
NCK1-208ENST00000482071 EDC4Q6P2E9 1401 aaKnown RBP8.54□□□□□ -1.04
NCK1-208ENST00000482071 FAM187AA6NFU0 413 aa8.54□□□□□ -1.04
NCK1-208ENST00000482071 FYB1O15117 783 aa8.54□□□□□ -1.04
NCK1-208ENST00000482071 FMNL1O95466 1100 aaPredicted RBP8.54□□□□□ -1.04
NCK1-208ENST00000482071 BRICD5Q6PL45 260 aa8.54□□□□□ -1.04
NCK1-208ENST00000482071 CC2D1BQ5T0F9 858 aaKnown RBP8.53□□□□□ -1.04
NCK1-208ENST00000482071 TMC1Q8TDI8 760 aa8.53□□□□□ -1.04
NCK1-208ENST00000482071 MRS2Q9HD23 443 aa8.53□□□□□ -1.04
NCK1-208ENST00000482071 PRDM9Q9NQV7 894 aa8.53□□□□□ -1.04
NCK1-208ENST00000482071 SHPRHQ149N8 1683 aa8.53□□□□□ -1.04
NCK1-208ENST00000482071 MARF1Q9Y4F3 1742 aaKnown RBP8.52□□□□□ -1.05
NCK1-208ENST00000482071 HAP1P54257 671 aaPredicted RBP8.52□□□□□ -1.05
NCK1-208ENST00000482071 MSS51Q4VC12 460 aa8.52□□□□□ -1.05
NCK1-208ENST00000482071 HDGFL2Q7Z4V5 671 aaPredicted RBP8.52□□□□□ -1.05
NCK1-208ENST00000482071 ZNF775Q96BV0 537 aaPredicted RBP8.52□□□□□ -1.05
NCK1-208ENST00000482071 LRRC7Q96NW7 1537 aa8.52□□□□□ -1.05
NCK1-208ENST00000482071 DCCP43146 1447 aa8.52□□□□□ -1.05
NCK1-208ENST00000482071 MAP2P11137 1827 aaKnown RBP8.52□□□□□ -1.05
NCK1-208ENST00000482071 PNPLA6Q8IY17 1366 aa8.51□□□□□ -1.05
NCK1-208ENST00000482071 MAP2K5Q13163 448 aa8.51□□□□□ -1.05
NCK1-208ENST00000482071 USP6P35125 1406 aa8.51□□□□□ -1.05
NCK1-208ENST00000482071 ACEP12821 1306 aa8.51□□□□□ -1.05
NCK1-208ENST00000482071 AATKQ6ZMQ8 1374 aa8.5□□□□□ -1.05
NCK1-208ENST00000482071 USP31Q70CQ4 1352 aa8.5□□□□□ -1.05
NCK1-208ENST00000482071 POTECB2RU33 542 aa8.5□□□□□ -1.05
NCK1-208ENST00000482071 CD46P15529 392 aa8.5□□□□□ -1.05
NCK1-208ENST00000482071 BLMP54132 1417 aaPredicted RBP8.5□□□□□ -1.05
NCK1-208ENST00000482071 HSPA2P54652 639 aa8.5□□□□□ -1.05
NCK1-208ENST00000482071 MST1RQ04912 1400 aa8.5□□□□□ -1.05
NCK1-208ENST00000482071 RNF19BQ6ZMZ0 732 aa8.5□□□□□ -1.05
NCK1-208ENST00000482071 SMG6Q86US8 1419 aaKnown RBP8.5□□□□□ -1.05
NCK1-208ENST00000482071 COL3A1P02461 1466 aaPredicted RBP8.5□□□□□ -1.05
NCK1-208ENST00000482071 OVOS2A0A0J9YW53 1432 aa8.49□□□□□ -1.05
NCK1-208ENST00000482071 OVOS2Q6IE36 1432 aa8.49□□□□□ -1.05
NCK1-208ENST00000482071 GRIPAP1Q4V328 841 aa8.49□□□□□ -1.05
NCK1-208ENST00000482071 C19orf44Q9H6X5 657 aa8.49□□□□□ -1.05
NCK1-208ENST00000482071 AAASQ9NRG9 546 aa8.49□□□□□ -1.05
NCK1-208ENST00000482071 TOR4AQ9NXH8 423 aa8.49□□□□□ -1.05
NCK1-208ENST00000482071 TTC21BQ7Z4L5 1316 aa8.49□□□□□ -1.05
NCK1-208ENST00000482071 TTC21AQ8NDW8 1320 aa8.49□□□□□ -1.05
NCK1-208ENST00000482071 ST8SIA5O15466 376 aa8.48□□□□□ -1.05
NCK1-208ENST00000482071 CD2BP2O95400 341 aaKnown RBP8.48□□□□□ -1.05
NCK1-208ENST00000482071 CENPBP07199 599 aaPredicted RBP8.48□□□□□ -1.05
NCK1-208ENST00000482071 FOXC1Q12948 553 aa8.48□□□□□ -1.05
NCK1-208ENST00000482071 MORC1Q86VD1 984 aa8.48□□□□□ -1.05
NCK1-208ENST00000482071 CRIPAKQ8N1N5 446 aa8.48□□□□□ -1.05
NCK1-208ENST00000482071 PIK3C2AO00443 1686 aa8.48□□□□□ -1.05
NCK1-208ENST00000482071 KIF1AQ12756 1690 aa8.48□□□□□ -1.05
NCK1-208ENST00000482071 TRPM3Q9HCF6 1732 aaPredicted RBP8.48□□□□□ -1.05
NCK1-208ENST00000482071 AVPP01185 164 aa8.47□□□□□ -1.05
NCK1-208ENST00000482071 ZBED9Q6R2W3 1325 aa8.47□□□□□ -1.05
NCK1-208ENST00000482071 PHRF1Q9P1Y6 1649 aaKnown RBP8.47□□□□□ -1.05
NCK1-208ENST00000482071 IRF6O14896 467 aa8.46□□□□□ -1.06
NCK1-208ENST00000482071 MMP16P51512 607 aa8.46□□□□□ -1.06
NCK1-208ENST00000482071 Q3C1V9 767 aa8.46□□□□□ -1.06
NCK1-208ENST00000482071 PROSER2Q86WR7 435 aaPredicted RBP8.46□□□□□ -1.06
NCK1-208ENST00000482071 FAM9BQ8IZU0 186 aa8.46□□□□□ -1.06
NCK1-208ENST00000482071 GGNBP2Q9H3C7 697 aa8.46□□□□□ -1.06
NCK1-208ENST00000482071 TMEM94Q12767 1356 aa8.46□□□□□ -1.06
NCK1-208ENST00000482071 C1orf167Q5SNV9 1468 aa8.45□□□□□ -1.06
NCK1-208ENST00000482071 MTHFSP49914 203 aa8.45□□□□□ -1.06
NCK1-208ENST00000482071 ADAMTS8Q9UP79 889 aa8.45□□□□□ -1.06
NCK1-208ENST00000482071 ALS2Q96Q42 1657 aa8.45□□□□□ -1.06
NCK1-208ENST00000482071 KDM4AO75164 1064 aa8.44□□□□□ -1.06
NCK1-208ENST00000482071 NME9Q86XW9 330 aa8.44□□□□□ -1.06
NCK1-208ENST00000482071 YTHDC1Q96MU7 727 aaKnown RBP8.44□□□□□ -1.06
NCK1-208ENST00000482071 POLKQ9UBT6 870 aa8.44□□□□□ -1.06
NCK1-208ENST00000482071 CDK12Q9NYV4 1490 aaPredicted RBP8.44□□□□□ -1.06
NCK1-208ENST00000482071 LTBP4Q8N2S1 1624 aa8.43□□□□□ -1.06
NCK1-208ENST00000482071 RGPD1P0DJD0 1748 aa8.43□□□□□ -1.06
NCK1-208ENST00000482071 HNRNPUQ00839 825 aaKnown RBP eCLIP8.43□□□□□ -1.06
NCK1-208ENST00000482071 MDM2Q00987 491 aaPredicted RBP8.43□□□□□ -1.06
NCK1-208ENST00000482071 CYP4X1Q8N118 509 aa8.43□□□□□ -1.06
NCK1-208ENST00000482071 NGEFQ8N5V2 710 aa8.43□□□□□ -1.06
NCK1-208ENST00000482071 ZNF521Q96K83 1311 aa8.43□□□□□ -1.06
NCK1-208ENST00000482071 KIF24Q5T7B8 1368 aa8.43□□□□□ -1.06
NCK1-208ENST00000482071 PEAK1Q9H792 1746 aa8.43□□□□□ -1.06
NCK1-208ENST00000482071 WNT7AO00755 349 aa8.42□□□□□ -1.06
NCK1-208ENST00000482071 DXOO77932 396 aaKnown RBP8.42□□□□□ -1.06
NCK1-208ENST00000482071 USP46P62068 366 aa8.42□□□□□ -1.06
NCK1-208ENST00000482071 CNGB1Q14028 1251 aaPredicted RBP8.42□□□□□ -1.06
NCK1-208ENST00000482071 PMFBP1Q8TBY8 1022 aa8.42□□□□□ -1.06
NCK1-208ENST00000482071 CCDC102AQ96A19 550 aa8.42□□□□□ -1.06
NCK1-208ENST00000482071 SLIT3O75094 1523 aa8.42□□□□□ -1.06
NCK1-208ENST00000482071 CRYBG1Q9Y4K1 1723 aa8.42□□□□□ -1.06
NCK1-208ENST00000482071 IQSEC2Q5JU85 1478 aa8.41□□□□□ -1.06
NCK1-208ENST00000482071 ZBTB24O43167 697 aaPredicted RBP8.41□□□□□ -1.06
NCK1-208ENST00000482071 HOXA2O43364 376 aa8.41□□□□□ -1.06
NCK1-208ENST00000482071 SMCPP49901 116 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms