RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 GLI3P10071 1580 aa22.83■■□□□ 1.24
MRPL28-209ENST00000481453 HSP90AB1P08238 724 aaKnown RBP22.82■■□□□ 1.24
MRPL28-209ENST00000481453 CARD10Q9BWT7 1032 aa22.82■■□□□ 1.24
MRPL28-209ENST00000481453 BRPF3Q9ULD4 1205 aa22.82■■□□□ 1.24
MRPL28-209ENST00000481453 LRRFIP2Q9Y608 721 aaKnown RBP22.82■■□□□ 1.24
MRPL28-209ENST00000481453 C16orf71Q8IYS4 520 aaPredicted RBP22.82■■□□□ 1.24
MRPL28-209ENST00000481453 LTBP4Q8N2S1 1624 aa22.81■■□□□ 1.24
MRPL28-209ENST00000481453 ATP8B2P98198 1209 aa22.81■■□□□ 1.24
MRPL28-209ENST00000481453 PDIA6Q15084 440 aa22.81■■□□□ 1.24
MRPL28-209ENST00000481453 LARP1Q6PKG0 1096 aaKnown RBP22.81■■□□□ 1.24
MRPL28-209ENST00000481453 PNMA6EA0A0J9YXQ4 647 aa22.81■■□□□ 1.24
MRPL28-209ENST00000481453 SMARCA5O60264 1052 aaPredicted RBP22.81■■□□□ 1.24
MRPL28-209ENST00000481453 ZNF496Q96IT1 587 aaPredicted RBP22.81■■□□□ 1.24
MRPL28-209ENST00000481453 AHDC1Q5TGY3 1603 aaPredicted RBP22.8■■□□□ 1.24
MRPL28-209ENST00000481453 ZCRB1Q8TBF4 217 aaKnown RBP22.8■■□□□ 1.24
MRPL28-209ENST00000481453 OTUD7AQ8TE49 926 aaPredicted RBP22.8■■□□□ 1.24
MRPL28-209ENST00000481453 UBTFL1P0CB47 393 aaPredicted RBP22.8■■□□□ 1.24
MRPL28-209ENST00000481453 PCDH11XQ9BZA7 1347 aa22.8■■□□□ 1.24
MRPL28-209ENST00000481453 PCDH11YQ9BZA8 1340 aa22.8■■□□□ 1.24
MRPL28-209ENST00000481453 RTN4Q9NQC3 1192 aaKnown RBP22.8■■□□□ 1.24
MRPL28-209ENST00000481453 DDX21Q9NR30 783 aaKnown RBP eCLIP22.8■■□□□ 1.24
MRPL28-209ENST00000481453 GSPT1P15170 499 aaKnown RBP22.79■■□□□ 1.24
MRPL28-209ENST00000481453 SPRYD3Q8NCJ5 442 aa22.79■■□□□ 1.24
MRPL28-209ENST00000481453 HYPKQ9NX55 129 aa22.79■■□□□ 1.24
MRPL28-209ENST00000481453 IL2RBP14784 551 aa22.78■■□□□ 1.24
MRPL28-209ENST00000481453 STRN4Q9NRL3 753 aa22.78■■□□□ 1.24
MRPL28-209ENST00000481453 APBB1O00213 710 aa22.77■■□□□ 1.24
MRPL28-209ENST00000481453 KSR2Q6VAB6 950 aa22.77■■□□□ 1.24
MRPL28-209ENST00000481453 MAP3K2Q9Y2U5 619 aa22.77■■□□□ 1.24
MRPL28-209ENST00000481453 COL22A1Q8NFW1 1626 aaPredicted RBP22.77■■□□□ 1.24
MRPL28-209ENST00000481453 CABP4P57796 275 aa22.77■■□□□ 1.24
MRPL28-209ENST00000481453 NBPF7P0C2Y1 421 aaPredicted RBP22.76■■□□□ 1.23
MRPL28-209ENST00000481453 NKX1-1Q15270 411 aaPredicted RBP22.76■■□□□ 1.23
MRPL28-209ENST00000481453 TTC22Q5TAA0 569 aa22.76■■□□□ 1.23
MRPL28-209ENST00000481453 EXOC6BQ9Y2D4 811 aa22.76■■□□□ 1.23
MRPL28-209ENST00000481453 SSH3Q8TE77 659 aa22.74■■□□□ 1.23
MRPL28-209ENST00000481453 IBTKQ9P2D0 1353 aaPredicted RBP22.74■■□□□ 1.23
MRPL28-209ENST00000481453 LAMB4A4D0S4 1761 aa22.74■■□□□ 1.23
MRPL28-209ENST00000481453 COL16A1Q07092 1604 aaPredicted RBP22.74■■□□□ 1.23
MRPL28-209ENST00000481453 PAPPAQ13219 1627 aa22.74■■□□□ 1.23
MRPL28-209ENST00000481453 EVA1CP58658 441 aa22.74■■□□□ 1.23
MRPL28-209ENST00000481453 TTC5Q8N0Z6 440 aa22.74■■□□□ 1.23
MRPL28-209ENST00000481453 COL14A1Q05707 1796 aaKnown RBP22.74■■□□□ 1.23
MRPL28-209ENST00000481453 UBR2Q8IWV8 1755 aa22.74■■□□□ 1.23
MRPL28-209ENST00000481453 SNRPA1P09661 255 aaKnown RBP22.73■■□□□ 1.23
MRPL28-209ENST00000481453 LRP10Q7Z4F1 713 aa22.73■■□□□ 1.23
MRPL28-209ENST00000481453 FMNL2Q96PY5 1086 aa22.73■■□□□ 1.23
MRPL28-209ENST00000481453 ALDH1L1O75891 902 aa22.73■■□□□ 1.23
MRPL28-209ENST00000481453 POLA2Q14181 598 aa22.73■■□□□ 1.23
MRPL28-209ENST00000481453 TBC1D9Q6ZT07 1266 aa22.73■■□□□ 1.23
MRPL28-209ENST00000481453 HSCBQ8IWL3 235 aa22.73■■□□□ 1.23
MRPL28-209ENST00000481453 USP16Q9Y5T5 823 aa22.73■■□□□ 1.23
MRPL28-209ENST00000481453 TOGARAM1Q9Y4F4 1720 aa22.72■■□□□ 1.23
MRPL28-209ENST00000481453 SALL3Q9BXA9 1300 aa22.71■■□□□ 1.23
MRPL28-209ENST00000481453 ERVV-2B6SEH9 535 aa22.71■■□□□ 1.23
MRPL28-209ENST00000481453 PPP1R42Q7Z4L9 355 aa22.71■■□□□ 1.23
MRPL28-209ENST00000481453 BTG4Q9NY30 223 aa22.71■■□□□ 1.23
MRPL28-209ENST00000481453 RBM25P49756 843 aaKnown RBP22.7■■□□□ 1.23
MRPL28-209ENST00000481453 CHMP5Q9NZZ3 219 aa22.7■■□□□ 1.23
MRPL28-209ENST00000481453 KCPQ6ZWJ8 1503 aa22.7■■□□□ 1.22
MRPL28-209ENST00000481453 AIMP1Q12904 312 aaKnown RBP22.7■■□□□ 1.22
MRPL28-209ENST00000481453 CWF19L2Q2TBE0 894 aaKnown RBP22.7■■□□□ 1.22
MRPL28-209ENST00000481453 DDX58O95786 925 aaKnown RBP22.69■■□□□ 1.22
MRPL28-209ENST00000481453 LRRCC1Q9C099 1032 aa22.69■■□□□ 1.22
MRPL28-209ENST00000481453 CDC45O75419 566 aa22.69■■□□□ 1.22
MRPL28-209ENST00000481453 MYL6BP14649 208 aa22.69■■□□□ 1.22
MRPL28-209ENST00000481453 LINS1Q8NG48 757 aa22.69■■□□□ 1.22
MRPL28-209ENST00000481453 OSBPL3Q9H4L5 887 aa22.69■■□□□ 1.22
MRPL28-209ENST00000481453 DDX54Q8TDD1 881 aaKnown RBP22.68■■□□□ 1.22
MRPL28-209ENST00000481453 XAGE3Q8WTP9 111 aa22.68■■□□□ 1.22
MRPL28-209ENST00000481453 TUBGCP6Q96RT7 1819 aa22.68■■□□□ 1.22
MRPL28-209ENST00000481453 DISP2A7MBM2 1401 aa22.67■■□□□ 1.22
MRPL28-209ENST00000481453 PDE1AP54750 535 aa22.67■■□□□ 1.22
MRPL28-209ENST00000481453 MCM4P33991 863 aa22.66■■□□□ 1.22
MRPL28-209ENST00000481453 COPS6Q7L5N1 327 aa22.66■■□□□ 1.22
MRPL28-209ENST00000481453 UTYO14607 1347 aa22.66■■□□□ 1.22
MRPL28-209ENST00000481453 TNS2Q63HR2 1409 aa22.66■■□□□ 1.22
MRPL28-209ENST00000481453 IGKV5-2P06315 115 aa22.66■■□□□ 1.22
MRPL28-209ENST00000481453 PIP4K2AP48426 406 aaPredicted RBP22.66■■□□□ 1.22
MRPL28-209ENST00000481453 MTX1Q13505 466 aa22.66■■□□□ 1.22
MRPL28-209ENST00000481453 SRGAP3O43295 1099 aa22.65■■□□□ 1.22
MRPL28-209ENST00000481453 SDSP20132 328 aa22.65■■□□□ 1.22
MRPL28-209ENST00000481453 PLCH1Q4KWH8 1693 aa22.65■■□□□ 1.22
MRPL28-209ENST00000481453 RIC3Q7Z5B4 369 aa22.64■■□□□ 1.21
MRPL28-209ENST00000481453 C9orf78Q9NZ63 289 aaPredicted RBP22.64■■□□□ 1.21
MRPL28-209ENST00000481453 SNX21Q969T3 373 aa22.63■■□□□ 1.21
MRPL28-209ENST00000481453 ARFGEF2Q9Y6D5 1785 aa22.63■■□□□ 1.21
MRPL28-209ENST00000481453 GRM8O00222 908 aa22.63■■□□□ 1.21
MRPL28-209ENST00000481453 PHLPP1O60346 1717 aa22.63■■□□□ 1.21
MRPL28-209ENST00000481453 KAZALD1Q96I82 304 aa22.62■■□□□ 1.21
MRPL28-209ENST00000481453 METTL22Q9BUU2 404 aaPredicted RBP22.62■■□□□ 1.21
MRPL28-209ENST00000481453 RAB11FIP3O75154 756 aa22.62■■□□□ 1.21
MRPL28-209ENST00000481453 SURF6O75683 361 aaKnown RBP22.62■■□□□ 1.21
MRPL28-209ENST00000481453 WNK3Q9BYP7 1800 aa22.61■■□□□ 1.21
MRPL28-209ENST00000481453 NEURL1BA8MQ27 555 aa22.61■■□□□ 1.21
MRPL28-209ENST00000481453 NBPF26B4DH59 902 aa22.61■■□□□ 1.21
MRPL28-209ENST00000481453 MX1P20591 662 aa22.61■■□□□ 1.21
MRPL28-209ENST00000481453 NBPF14Q5TI25 921 aa22.61■■□□□ 1.21
MRPL28-209ENST00000481453 TSHZ3Q63HK5 1081 aa22.61■■□□□ 1.21
MRPL28-209ENST00000481453 NBPF10Q6P3W6 841 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms