RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 HYPKQ9NX55 129 aa18.79■□□□□ 0.6
SNRNP200-205ENST00000480835 CHPF2Q9P2E5 772 aa18.79■□□□□ 0.6
SNRNP200-205ENST00000480835 RGS12O14924 1447 aa18.79■□□□□ 0.6
SNRNP200-205ENST00000480835 PRIM1P49642 420 aaKnown RBP18.78■□□□□ 0.6
SNRNP200-205ENST00000480835 G2E3Q7L622 706 aa18.78■□□□□ 0.6
SNRNP200-205ENST00000480835 ITPRIPQ8IWB1 547 aa18.78■□□□□ 0.6
SNRNP200-205ENST00000480835 VSIG10Q8N0Z9 540 aa18.78■□□□□ 0.6
SNRNP200-205ENST00000480835 TEX13AQ9BXU3 409 aaPredicted RBP18.78■□□□□ 0.6
SNRNP200-205ENST00000480835 DDX21Q9NR30 783 aaKnown RBP eCLIP18.78■□□□□ 0.6
SNRNP200-205ENST00000480835 INTS3Q68E01 1043 aaKnown RBP18.77■□□□□ 0.6
SNRNP200-205ENST00000480835 ATG3Q9NT62 314 aa18.77■□□□□ 0.6
SNRNP200-205ENST00000480835 PXDNLA1KZ92 1463 aa18.77■□□□□ 0.59
SNRNP200-205ENST00000480835 PRAMEF22A3QJZ6 481 aa18.76■□□□□ 0.59
SNRNP200-205ENST00000480835 FKBP5Q13451 457 aaPredicted RBP18.76■□□□□ 0.59
SNRNP200-205ENST00000480835 B4GALNT3Q6L9W6 998 aa18.76■□□□□ 0.59
SNRNP200-205ENST00000480835 ASAP1Q9ULH1 1129 aa18.76■□□□□ 0.59
SNRNP200-205ENST00000480835 SYTL4Q96C24 671 aaPredicted RBP18.75■□□□□ 0.59
SNRNP200-205ENST00000480835 PTCD1O75127 700 aaKnown RBP18.74■□□□□ 0.59
SNRNP200-205ENST00000480835 CCT4P50991 539 aaKnown RBP18.74■□□□□ 0.59
SNRNP200-205ENST00000480835 USP16Q9Y5T5 823 aa18.74■□□□□ 0.59
SNRNP200-205ENST00000480835 NHSQ6T4R5 1651 aa18.73■□□□□ 0.59
SNRNP200-205ENST00000480835 SEPT12Q8IYM1 358 aa18.73■□□□□ 0.59
SNRNP200-205ENST00000480835 SMARCC1Q92922 1105 aaPredicted RBP18.73■□□□□ 0.59
SNRNP200-205ENST00000480835 ACSBG1Q96GR2 724 aa18.73■□□□□ 0.59
SNRNP200-205ENST00000480835 PHAXQ9H814 394 aaKnown RBP18.73■□□□□ 0.59
SNRNP200-205ENST00000480835 CICQ96RK0 1608 aaPredicted RBP18.73■□□□□ 0.59
SNRNP200-205ENST00000480835 DDX58O95786 925 aaKnown RBP18.72■□□□□ 0.59
SNRNP200-205ENST00000480835 PDIA6Q15084 440 aa18.72■□□□□ 0.59
SNRNP200-205ENST00000480835 SBF2Q86WG5 1849 aa18.72■□□□□ 0.59
SNRNP200-205ENST00000480835 ZNF831Q5JPB2 1677 aa18.71■□□□□ 0.59
SNRNP200-205ENST00000480835 RBM6P78332 1123 aaKnown RBP18.71■□□□□ 0.59
SNRNP200-205ENST00000480835 RBM42Q9BTD8 480 aaKnown RBP18.71■□□□□ 0.59
SNRNP200-205ENST00000480835 ZBTB40Q9NUA8 1239 aa18.71■□□□□ 0.59
SNRNP200-205ENST00000480835 ZBTB7BO15156 539 aaPredicted RBP18.7■□□□□ 0.58
SNRNP200-205ENST00000480835 PROSER3Q2NL68 480 aa18.7■□□□□ 0.58
SNRNP200-205ENST00000480835 BRWD3Q6RI45 1802 aa18.7■□□□□ 0.58
SNRNP200-205ENST00000480835 TJP1Q07157 1748 aa18.69■□□□□ 0.58
SNRNP200-205ENST00000480835 STARD3NLO95772 234 aa18.69■□□□□ 0.58
SNRNP200-205ENST00000480835 ANXA1P04083 346 aa18.69■□□□□ 0.58
SNRNP200-205ENST00000480835 ATP10DQ9P241 1426 aa18.68■□□□□ 0.58
SNRNP200-205ENST00000480835 BTAF1O14981 1849 aa18.68■□□□□ 0.58
SNRNP200-205ENST00000480835 F6X3S4 739 aa18.68■□□□□ 0.58
SNRNP200-205ENST00000480835 SLC4A10Q6U841 1118 aa18.68■□□□□ 0.58
SNRNP200-205ENST00000480835 KSR2Q6VAB6 950 aa18.68■□□□□ 0.58
SNRNP200-205ENST00000480835 PELP1Q8IZL8 1130 aaKnown RBP18.68■□□□□ 0.58
SNRNP200-205ENST00000480835 DNAAF4Q8WXU2 420 aa18.68■□□□□ 0.58
SNRNP200-205ENST00000480835 PI4KAP2A4QPH2 592 aa18.67■□□□□ 0.58
SNRNP200-205ENST00000480835 CENPQQ7L2Z9 268 aaPredicted RBP18.67■□□□□ 0.58
SNRNP200-205ENST00000480835 LRP10Q7Z4F1 713 aa18.67■□□□□ 0.58
SNRNP200-205ENST00000480835 DNAJC10Q8IXB1 793 aa18.67■□□□□ 0.58
SNRNP200-205ENST00000480835 PI4KAP1Q8N8J0 262 aa18.67■□□□□ 0.58
SNRNP200-205ENST00000480835 ADCY9O60503 1353 aa18.67■□□□□ 0.58
SNRNP200-205ENST00000480835 MYL6BP14649 208 aa18.66■□□□□ 0.58
SNRNP200-205ENST00000480835 XAGE3Q8WTP9 111 aa18.66■□□□□ 0.58
SNRNP200-205ENST00000480835 PALLDQ8WX93 1383 aa18.66■□□□□ 0.58
SNRNP200-205ENST00000480835 KCNQ2O43526 872 aa18.65■□□□□ 0.58
SNRNP200-205ENST00000480835 KRT27Q7Z3Y8 459 aa18.65■□□□□ 0.58
SNRNP200-205ENST00000480835 SRCIN1Q9C0H9 1055 aa18.65■□□□□ 0.58
SNRNP200-205ENST00000480835 KDM2BQ8NHM5 1336 aa18.65■□□□□ 0.58
SNRNP200-205ENST00000480835 IBTKQ9P2D0 1353 aaPredicted RBP18.65■□□□□ 0.58
SNRNP200-205ENST00000480835 NBPF26B4DH59 902 aa18.64■□□□□ 0.57
SNRNP200-205ENST00000480835 ALDH1L1O75891 902 aa18.64■□□□□ 0.57
SNRNP200-205ENST00000480835 NBPF14Q5TI25 921 aa18.64■□□□□ 0.57
SNRNP200-205ENST00000480835 NBPF10Q6P3W6 841 aaKnown RBP18.64■□□□□ 0.57
SNRNP200-205ENST00000480835 COPS6Q7L5N1 327 aa18.64■□□□□ 0.57
SNRNP200-205ENST00000480835 NBPF15Q8N660 670 aa18.64■□□□□ 0.57
SNRNP200-205ENST00000480835 SLC4A9Q96Q91 983 aa18.64■□□□□ 0.57
SNRNP200-205ENST00000480835 RWDD1Q9H446 243 aaPredicted RBP18.64■□□□□ 0.57
SNRNP200-205ENST00000480835 PCDHB15Q9Y5E8 787 aa18.64■□□□□ 0.57
SNRNP200-205ENST00000480835 ARFGEF2Q9Y6D5 1785 aa18.63■□□□□ 0.57
SNRNP200-205ENST00000480835 LOC102724428A0A0B4J2F2 783 aa18.63■□□□□ 0.57
SNRNP200-205ENST00000480835 A1BGP04217 495 aa18.63■□□□□ 0.57
SNRNP200-205ENST00000480835 GNAI3P08754 354 aa18.63■□□□□ 0.57
SNRNP200-205ENST00000480835 CYP19A1P11511 503 aaPredicted RBP18.63■□□□□ 0.57
SNRNP200-205ENST00000480835 SIK1P57059 783 aa18.63■□□□□ 0.57
SNRNP200-205ENST00000480835 AIMP1Q12904 312 aaKnown RBP18.63■□□□□ 0.57
SNRNP200-205ENST00000480835 FAM196AQ6ZSG2 479 aa18.63■□□□□ 0.57
SNRNP200-205ENST00000480835 RIC3Q7Z5B4 369 aa18.63■□□□□ 0.57
SNRNP200-205ENST00000480835 MAP3K2Q9Y2U5 619 aa18.63■□□□□ 0.57
SNRNP200-205ENST00000480835 RREB1Q92766 1687 aa18.63■□□□□ 0.57
SNRNP200-205ENST00000480835 RXRBP28702 533 aa18.62■□□□□ 0.57
SNRNP200-205ENST00000480835 HDAC1Q13547 482 aaPredicted RBP18.62■□□□□ 0.57
SNRNP200-205ENST00000480835 BEND3Q5T5X7 828 aa18.62■□□□□ 0.57
SNRNP200-205ENST00000480835 ANKRD13DQ6ZTN6 518 aa18.62■□□□□ 0.57
SNRNP200-205ENST00000480835 COL5A3P25940 1745 aaPredicted RBP18.62■□□□□ 0.57
SNRNP200-205ENST00000480835 NUP188Q5SRE5 1749 aa18.61■□□□□ 0.57
SNRNP200-205ENST00000480835 ATP6V1AP38606 617 aa18.61■□□□□ 0.57
SNRNP200-205ENST00000480835 LINS1Q8NG48 757 aa18.61■□□□□ 0.57
SNRNP200-205ENST00000480835 PLBD2Q8NHP8 589 aa18.61■□□□□ 0.57
SNRNP200-205ENST00000480835 LY75O60449 1722 aa18.6■□□□□ 0.57
SNRNP200-205ENST00000480835 NEXNQ0ZGT2 675 aa18.6■□□□□ 0.57
SNRNP200-205ENST00000480835 MEIS3Q99687 375 aa18.6■□□□□ 0.57
SNRNP200-205ENST00000480835 METTL22Q9BUU2 404 aaPredicted RBP18.6■□□□□ 0.57
SNRNP200-205ENST00000480835 BCL11BQ9C0K0 894 aaPredicted RBP18.6■□□□□ 0.57
SNRNP200-205ENST00000480835 PIP4K2AP48426 406 aaPredicted RBP18.59■□□□□ 0.57
SNRNP200-205ENST00000480835 FAM182BQ5T319 152 aa18.59■□□□□ 0.57
SNRNP200-205ENST00000480835 HDAC5Q9UQL6 1122 aa18.59■□□□□ 0.57
SNRNP200-205ENST00000480835 AFDNP55196 1824 aaKnown RBP18.58■□□□□ 0.57
SNRNP200-205ENST00000480835 IGHDP01880 384 aa18.58■□□□□ 0.56
SNRNP200-205ENST00000480835 RPAP2Q8IXW5 612 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms