RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 RGS12O14924 1447 aa22.43■■□□□ 1.18
UPF3A-206ENST00000480362 MS4A1P11836 297 aa22.43■■□□□ 1.18
UPF3A-206ENST00000480362 TRIM27P14373 513 aa22.43■■□□□ 1.18
UPF3A-206ENST00000480362 CLUAP1Q96AJ1 413 aa22.43■■□□□ 1.18
UPF3A-206ENST00000480362 SBF2Q86WG5 1849 aa22.43■■□□□ 1.18
UPF3A-206ENST00000480362 PANK1Q8TE04 598 aa22.42■■□□□ 1.18
UPF3A-206ENST00000480362 SLC4A9Q96Q91 983 aa22.42■■□□□ 1.18
UPF3A-206ENST00000480362 TEX13AQ9BXU3 409 aaPredicted RBP22.42■■□□□ 1.18
UPF3A-206ENST00000480362 PALLDQ8WX93 1383 aa22.41■■□□□ 1.18
UPF3A-206ENST00000480362 PTPRCP08575 1304 aa22.41■■□□□ 1.18
UPF3A-206ENST00000480362 ANXA1P04083 346 aa22.41■■□□□ 1.18
UPF3A-206ENST00000480362 PDIA6Q15084 440 aa22.41■■□□□ 1.18
UPF3A-206ENST00000480362 DNAJC10Q8IXB1 793 aa22.41■■□□□ 1.18
UPF3A-206ENST00000480362 DZIP1LQ8IYY4 767 aaKnown RBP22.41■■□□□ 1.18
UPF3A-206ENST00000480362 CRBNQ96SW2 442 aa22.41■■□□□ 1.18
UPF3A-206ENST00000480362 API5Q9BZZ5 524 aaKnown RBP22.41■■□□□ 1.18
UPF3A-206ENST00000480362 PHAXQ9H814 394 aaKnown RBP22.41■■□□□ 1.18
UPF3A-206ENST00000480362 DDX21Q9NR30 783 aaKnown RBP eCLIP22.41■■□□□ 1.18
UPF3A-206ENST00000480362 LAMB4A4D0S4 1761 aa22.4■■□□□ 1.18
UPF3A-206ENST00000480362 CACNA1FO60840 1977 aa22.4■■□□□ 1.18
UPF3A-206ENST00000480362 BCL11BQ9C0K0 894 aaPredicted RBP22.4■■□□□ 1.18
UPF3A-206ENST00000480362 RLBP1P12271 317 aa22.39■■□□□ 1.17
UPF3A-206ENST00000480362 FLIIQ13045 1269 aa22.39■■□□□ 1.17
UPF3A-206ENST00000480362 PROSER3Q2NL68 480 aa22.39■■□□□ 1.17
UPF3A-206ENST00000480362 FTSJ3Q8IY81 847 aaKnown RBP22.39■■□□□ 1.17
UPF3A-206ENST00000480362 EXOC6Q8TAG9 804 aa22.39■■□□□ 1.17
UPF3A-206ENST00000480362 HYPKQ9NX55 129 aa22.39■■□□□ 1.17
UPF3A-206ENST00000480362 BTAF1O14981 1849 aa22.38■■□□□ 1.17
UPF3A-206ENST00000480362 LOC102724428A0A0B4J2F2 783 aa22.38■■□□□ 1.17
UPF3A-206ENST00000480362 MYL6BP14649 208 aa22.38■■□□□ 1.17
UPF3A-206ENST00000480362 SIK1P57059 783 aa22.38■■□□□ 1.17
UPF3A-206ENST00000480362 ERBB4Q15303 1308 aa22.37■■□□□ 1.17
UPF3A-206ENST00000480362 A1BGP04217 495 aa22.37■■□□□ 1.17
UPF3A-206ENST00000480362 ATP6V1AP38606 617 aa22.37■■□□□ 1.17
UPF3A-206ENST00000480362 ERICH6BQ5W0A0 696 aa22.37■■□□□ 1.17
UPF3A-206ENST00000480362 COG6Q9Y2V7 657 aa22.37■■□□□ 1.17
UPF3A-206ENST00000480362 TRIM37O94972 964 aa22.36■■□□□ 1.17
UPF3A-206ENST00000480362 STARD3NLO95772 234 aa22.36■■□□□ 1.17
UPF3A-206ENST00000480362 PIP4K2AP48426 406 aaPredicted RBP22.36■■□□□ 1.17
UPF3A-206ENST00000480362 FKBP5Q13451 457 aaPredicted RBP22.36■■□□□ 1.17
UPF3A-206ENST00000480362 NBPF26B4DH59 902 aa22.35■■□□□ 1.17
UPF3A-206ENST00000480362 CYP19A1P11511 503 aaPredicted RBP22.35■■□□□ 1.17
UPF3A-206ENST00000480362 NBPF14Q5TI25 921 aa22.35■■□□□ 1.17
UPF3A-206ENST00000480362 NBPF10Q6P3W6 841 aaKnown RBP22.35■■□□□ 1.17
UPF3A-206ENST00000480362 NBPF15Q8N660 670 aa22.35■■□□□ 1.17
UPF3A-206ENST00000480362 TMEM57Q8N5G2 664 aa22.34■■□□□ 1.17
UPF3A-206ENST00000480362 TJP1Q07157 1748 aa22.34■■□□□ 1.17
UPF3A-206ENST00000480362 ABCC4O15439 1325 aa22.33■■□□□ 1.17
UPF3A-206ENST00000480362 ITPK1Q13572 414 aa22.33■■□□□ 1.17
UPF3A-206ENST00000480362 LRP10Q7Z4F1 713 aa22.33■■□□□ 1.17
UPF3A-206ENST00000480362 F6X3S4 739 aa22.32■■□□□ 1.16
UPF3A-206ENST00000480362 AIMP1Q12904 312 aaKnown RBP22.32■■□□□ 1.16
UPF3A-206ENST00000480362 MVPQ14764 893 aaKnown RBP22.32■■□□□ 1.16
UPF3A-206ENST00000480362 XAGE3Q8WTP9 111 aa22.32■■□□□ 1.16
UPF3A-206ENST00000480362 COPS6Q7L5N1 327 aa22.31■■□□□ 1.16
UPF3A-206ENST00000480362 ITPRIPQ8IWB1 547 aa22.31■■□□□ 1.16
UPF3A-206ENST00000480362 PI4KAP2A4QPH2 592 aa22.29■■□□□ 1.16
UPF3A-206ENST00000480362 DDX58O95786 925 aaKnown RBP22.29■■□□□ 1.16
UPF3A-206ENST00000480362 KCNQ4P56696 695 aa22.29■■□□□ 1.16
UPF3A-206ENST00000480362 INTS3Q68E01 1043 aaKnown RBP22.29■■□□□ 1.16
UPF3A-206ENST00000480362 SLC4A10Q6U841 1118 aa22.29■■□□□ 1.16
UPF3A-206ENST00000480362 KSR2Q6VAB6 950 aa22.29■■□□□ 1.16
UPF3A-206ENST00000480362 PI4KAP1Q8N8J0 262 aa22.29■■□□□ 1.16
UPF3A-206ENST00000480362 ZNF831Q5JPB2 1677 aa22.29■■□□□ 1.16
UPF3A-206ENST00000480362 CICQ96RK0 1608 aaPredicted RBP22.28■■□□□ 1.16
UPF3A-206ENST00000480362 CCNL1Q9UK58 526 aaPredicted RBP22.28■■□□□ 1.16
UPF3A-206ENST00000480362 CRKLP46109 303 aaKnown RBP22.27■■□□□ 1.16
UPF3A-206ENST00000480362 INTS5Q6P9B9 1019 aaKnown RBP22.27■■□□□ 1.16
UPF3A-206ENST00000480362 DNAAF4Q8WXU2 420 aa22.27■■□□□ 1.16
UPF3A-206ENST00000480362 CCDC87Q9NVE4 849 aa22.27■■□□□ 1.16
UPF3A-206ENST00000480362 PPP4R2Q9NY27 417 aa22.27■■□□□ 1.16
UPF3A-206ENST00000480362 DDX19BQ9UMR2 479 aa22.27■■□□□ 1.16
UPF3A-206ENST00000480362 ZBTB1Q9Y2K1 713 aa22.27■■□□□ 1.16
UPF3A-206ENST00000480362 ADCY9O60503 1353 aa22.26■■□□□ 1.15
UPF3A-206ENST00000480362 LY75O60449 1722 aa22.26■■□□□ 1.15
UPF3A-206ENST00000480362 CCT4P50991 539 aaKnown RBP22.26■■□□□ 1.15
UPF3A-206ENST00000480362 RIC3Q7Z5B4 369 aa22.26■■□□□ 1.15
UPF3A-206ENST00000480362 LINC00116Q8NCU8 138 aa22.26■■□□□ 1.15
UPF3A-206ENST00000480362 MAP3K2Q9Y2U5 619 aa22.26■■□□□ 1.15
UPF3A-206ENST00000480362 ZNF330Q9Y3S2 320 aaPredicted RBP22.26■■□□□ 1.15
UPF3A-206ENST00000480362 ANKRD13DQ6ZTN6 518 aa22.25■■□□□ 1.15
UPF3A-206ENST00000480362 TTLL7Q6ZT98 887 aa22.24■■□□□ 1.15
UPF3A-206ENST00000480362 COL5A3P25940 1745 aaPredicted RBP22.23■■□□□ 1.15
UPF3A-206ENST00000480362 ZBTB7BO15156 539 aaPredicted RBP22.23■■□□□ 1.15
UPF3A-206ENST00000480362 APBA3O96018 575 aa22.23■■□□□ 1.15
UPF3A-206ENST00000480362 IL6STP40189 918 aaPredicted RBP22.23■■□□□ 1.15
UPF3A-206ENST00000480362 PLBD2Q8NHP8 589 aa22.22■■□□□ 1.15
UPF3A-206ENST00000480362 PXDNLA1KZ92 1463 aa22.22■■□□□ 1.15
UPF3A-206ENST00000480362 PLSCR1O15162 318 aa22.21■■□□□ 1.15
UPF3A-206ENST00000480362 AAMPQ13685 434 aa22.21■■□□□ 1.15
UPF3A-206ENST00000480362 BEND3Q5T5X7 828 aa22.21■■□□□ 1.15
UPF3A-206ENST00000480362 RC3H1Q5TC82 1133 aaKnown RBP22.21■■□□□ 1.15
UPF3A-206ENST00000480362 SRCIN1Q9C0H9 1055 aa22.21■■□□□ 1.15
UPF3A-206ENST00000480362 CHMP4BQ9H444 224 aaKnown RBP22.21■■□□□ 1.15
UPF3A-206ENST00000480362 CNTNAP4Q9C0A0 1308 aa22.21■■□□□ 1.15
UPF3A-206ENST00000480362 RREB1Q92766 1687 aa22.2■■□□□ 1.15
UPF3A-206ENST00000480362 EIF5P55010 431 aaKnown RBP22.2■■□□□ 1.14
UPF3A-206ENST00000480362 SLC27A3Q5K4L6 730 aa22.2■■□□□ 1.14
UPF3A-206ENST00000480362 NPM2Q86SE8 214 aaKnown RBP22.2■■□□□ 1.14
UPF3A-206ENST00000480362 ARXQ96QS3 562 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms