RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 PLIN1O60240 522 aa8.27□□□□□ -1.09
HERC4-210ENST00000480158 ANXA1P04083 346 aa8.27□□□□□ -1.09
HERC4-210ENST00000480158 HDGFL1Q5TGJ6 251 aa8.27□□□□□ -1.09
HERC4-210ENST00000480158 FRAT1Q92837 279 aaPredicted RBP8.27□□□□□ -1.09
HERC4-210ENST00000480158 BCL11BQ9C0K0 894 aaPredicted RBP8.27□□□□□ -1.09
HERC4-210ENST00000480158 TSHZ2Q9NRE2 1034 aa8.27□□□□□ -1.09
HERC4-210ENST00000480158 APBA3O96018 575 aa8.26□□□□□ -1.09
HERC4-210ENST00000480158 SNRPA1P09661 255 aaKnown RBP8.26□□□□□ -1.09
HERC4-210ENST00000480158 ATP6V1AP38606 617 aa8.26□□□□□ -1.09
HERC4-210ENST00000480158 DNAJC10Q8IXB1 793 aa8.26□□□□□ -1.09
HERC4-210ENST00000480158 SSH1Q8WYL5 1049 aa8.26□□□□□ -1.09
HERC4-210ENST00000480158 SLC4A9Q96Q91 983 aa8.26□□□□□ -1.09
HERC4-210ENST00000480158 SMC4Q9NTJ3 1288 aa8.26□□□□□ -1.09
HERC4-210ENST00000480158 PALLDQ8WX93 1383 aa8.26□□□□□ -1.09
HERC4-210ENST00000480158 ITGB4P16144 1822 aa8.26□□□□□ -1.09
HERC4-210ENST00000480158 RARSP54136 660 aaKnown RBP8.25□□□□□ -1.09
HERC4-210ENST00000480158 IRX6P78412 446 aaPredicted RBP8.25□□□□□ -1.09
HERC4-210ENST00000480158 ZNF330Q9Y3S2 320 aaPredicted RBP8.25□□□□□ -1.09
HERC4-210ENST00000480158 SIPA1L3O60292 1781 aaPredicted RBP8.25□□□□□ -1.09
HERC4-210ENST00000480158 LOC102724428A0A0B4J2F2 783 aa8.25□□□□□ -1.09
HERC4-210ENST00000480158 MYL6BP14649 208 aa8.25□□□□□ -1.09
HERC4-210ENST00000480158 SIK1P57059 783 aa8.25□□□□□ -1.09
HERC4-210ENST00000480158 HEG1Q9ULI3 1381 aa8.25□□□□□ -1.09
HERC4-210ENST00000480158 A1BGP04217 495 aa8.24□□□□□ -1.09
HERC4-210ENST00000480158 POLA2Q14181 598 aa8.24□□□□□ -1.09
HERC4-210ENST00000480158 ARXQ96QS3 562 aa8.24□□□□□ -1.09
HERC4-210ENST00000480158 CHPF2Q9P2E5 772 aa8.24□□□□□ -1.09
HERC4-210ENST00000480158 RGL2O15211 777 aa8.24□□□□□ -1.09
HERC4-210ENST00000480158 CANXP27824 592 aaKnown RBP8.24□□□□□ -1.09
HERC4-210ENST00000480158 ITPK1Q13572 414 aa8.24□□□□□ -1.09
HERC4-210ENST00000480158 PROSER3Q2NL68 480 aa8.24□□□□□ -1.09
HERC4-210ENST00000480158 SMARCC1Q92922 1105 aaPredicted RBP8.24□□□□□ -1.09
HERC4-210ENST00000480158 STK31Q9BXU1 1019 aa8.24□□□□□ -1.09
HERC4-210ENST00000480158 CCNL1Q9UK58 526 aaPredicted RBP8.24□□□□□ -1.09
HERC4-210ENST00000480158 KDM3BQ7LBC6 1761 aa8.24□□□□□ -1.09
HERC4-210ENST00000480158 AIMP1Q12904 312 aaKnown RBP8.23□□□□□ -1.09
HERC4-210ENST00000480158 CCDC30Q5VVM6 783 aa8.23□□□□□ -1.09
HERC4-210ENST00000480158 SMIM5Q71RC9 77 aa8.23□□□□□ -1.09
HERC4-210ENST00000480158 KCPQ6ZWJ8 1503 aa8.23□□□□□ -1.09
HERC4-210ENST00000480158 G2E3Q7L622 706 aa8.23□□□□□ -1.09
HERC4-210ENST00000480158 CLUAP1Q96AJ1 413 aa8.23□□□□□ -1.09
HERC4-210ENST00000480158 PHAXQ9H814 394 aaKnown RBP8.23□□□□□ -1.09
HERC4-210ENST00000480158 NOB1Q9ULX3 412 aaKnown RBP8.23□□□□□ -1.09
HERC4-210ENST00000480158 CT47B1P0C2W7 299 aaPredicted RBP8.22□□□□□ -1.09
HERC4-210ENST00000480158 EN1Q05925 392 aaPredicted RBP8.22□□□□□ -1.09
HERC4-210ENST00000480158 LRRC4BQ9NT99 713 aa8.22□□□□□ -1.09
HERC4-210ENST00000480158 TNNQ9UQP3 1299 aa8.22□□□□□ -1.09
HERC4-210ENST00000480158 NHSQ6T4R5 1651 aa8.22□□□□□ -1.09
HERC4-210ENST00000480158 STARD3NLO95772 234 aa8.22□□□□□ -1.09
HERC4-210ENST00000480158 SF3B2Q13435 895 aaKnown RBP8.22□□□□□ -1.09
HERC4-210ENST00000480158 DEFB132Q7Z7B7 95 aa8.22□□□□□ -1.09
HERC4-210ENST00000480158 MRPL50Q8N5N7 158 aaKnown RBP8.22□□□□□ -1.09
HERC4-210ENST00000480158 ZNF428Q96B54 188 aa8.22□□□□□ -1.09
HERC4-210ENST00000480158 BTAF1O14981 1849 aa8.22□□□□□ -1.09
HERC4-210ENST00000480158 SBF2Q86WG5 1849 aa8.21□□□□□ -1.09
HERC4-210ENST00000480158 NBPF26B4DH59 902 aa8.21□□□□□ -1.09
HERC4-210ENST00000480158 HOXB7P09629 217 aa8.21□□□□□ -1.09
HERC4-210ENST00000480158 CYP19A1P11511 503 aaPredicted RBP8.21□□□□□ -1.09
HERC4-210ENST00000480158 C20orf194Q5TEA3 1177 aa8.21□□□□□ -1.09
HERC4-210ENST00000480158 NBPF14Q5TI25 921 aa8.21□□□□□ -1.09
HERC4-210ENST00000480158 NBPF10Q6P3W6 841 aaKnown RBP8.21□□□□□ -1.09
HERC4-210ENST00000480158 NBPF15Q8N660 670 aa8.21□□□□□ -1.09
HERC4-210ENST00000480158 LINC00116Q8NCU8 138 aa8.21□□□□□ -1.09
HERC4-210ENST00000480158 DBF4Q9UBU7 674 aaPredicted RBP8.21□□□□□ -1.09
HERC4-210ENST00000480158 CRKLP46109 303 aaKnown RBP8.21□□□□□ -1.1
HERC4-210ENST00000480158 PDIA6Q15084 440 aa8.21□□□□□ -1.1
HERC4-210ENST00000480158 TXNRD1Q16881 649 aa8.21□□□□□ -1.1
HERC4-210ENST00000480158 ALDH1L2Q3SY69 923 aa8.21□□□□□ -1.1
HERC4-210ENST00000480158 ILDR2Q71H61 639 aa8.21□□□□□ -1.1
HERC4-210ENST00000480158 ZBTB1Q9Y2K1 713 aa8.21□□□□□ -1.1
HERC4-210ENST00000480158 PAPPAQ13219 1627 aa8.21□□□□□ -1.1
HERC4-210ENST00000480158 C5P01031 1676 aa8.2□□□□□ -1.1
HERC4-210ENST00000480158 RRP1P56182 461 aaKnown RBP8.2□□□□□ -1.1
HERC4-210ENST00000480158 FKBP5Q13451 457 aaPredicted RBP8.2□□□□□ -1.1
HERC4-210ENST00000480158 EZH2Q15910 746 aaKnown RBP8.2□□□□□ -1.1
HERC4-210ENST00000480158 TEX13AQ9BXU3 409 aaPredicted RBP8.2□□□□□ -1.1
HERC4-210ENST00000480158 F6X3S4 739 aa8.2□□□□□ -1.1
HERC4-210ENST00000480158 FLIIQ13045 1269 aa8.2□□□□□ -1.1
HERC4-210ENST00000480158 COPS6Q7L5N1 327 aa8.2□□□□□ -1.1
HERC4-210ENST00000480158 PANK1Q8TE04 598 aa8.2□□□□□ -1.1
HERC4-210ENST00000480158 XAGE3Q8WTP9 111 aa8.2□□□□□ -1.1
HERC4-210ENST00000480158 DDX21Q9NR30 783 aaKnown RBP eCLIP8.2□□□□□ -1.1
HERC4-210ENST00000480158 UBR2Q8IWV8 1755 aa8.2□□□□□ -1.1
HERC4-210ENST00000480158 PHF14O94880 888 aa8.19□□□□□ -1.1
HERC4-210ENST00000480158 INTS5Q6P9B9 1019 aaKnown RBP8.19□□□□□ -1.1
HERC4-210ENST00000480158 SLC4A10Q6U841 1118 aa8.19□□□□□ -1.1
HERC4-210ENST00000480158 NPM2Q86SE8 214 aaKnown RBP8.19□□□□□ -1.1
HERC4-210ENST00000480158 CCDC87Q9NVE4 849 aa8.19□□□□□ -1.1
HERC4-210ENST00000480158 PLSCR1O15162 318 aa8.19□□□□□ -1.1
HERC4-210ENST00000480158 GNPATO15228 680 aa8.19□□□□□ -1.1
HERC4-210ENST00000480158 TRIM27P14373 513 aa8.19□□□□□ -1.1
HERC4-210ENST00000480158 ZKSCAN2Q63HK3 967 aa8.19□□□□□ -1.1
HERC4-210ENST00000480158 TTLL7Q6ZT98 887 aa8.19□□□□□ -1.1
HERC4-210ENST00000480158 HYPKQ9NX55 129 aa8.19□□□□□ -1.1
HERC4-210ENST00000480158 TBC1D2BQ9UPU7 963 aa8.19□□□□□ -1.1
HERC4-210ENST00000480158 SOS1Q07889 1333 aaPredicted RBP8.19□□□□□ -1.1
HERC4-210ENST00000480158 ATF7IPQ6VMQ6 1270 aa8.18□□□□□ -1.1
HERC4-210ENST00000480158 AMIGO3Q86WK7 504 aa8.18□□□□□ -1.1
HERC4-210ENST00000480158 FTSJ3Q8IY81 847 aaKnown RBP8.18□□□□□ -1.1
HERC4-210ENST00000480158 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms