RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 SOS1Q07889 1333 aaPredicted RBP9.63□□□□□ -0.87
COL17A1-205ENST00000480127 ZC3H4Q9UPT8 1303 aaKnown RBP9.63□□□□□ -0.87
COL17A1-205ENST00000480127 C1orf141Q5JVX7 400 aa9.63□□□□□ -0.87
COL17A1-205ENST00000480127 DNAJC10Q8IXB1 793 aa9.63□□□□□ -0.87
COL17A1-205ENST00000480127 TNS4Q8IZW8 715 aa9.63□□□□□ -0.87
COL17A1-205ENST00000480127 GLTPD2A6NH11 291 aa9.62□□□□□ -0.87
COL17A1-205ENST00000480127 VEGFAP15692 232 aaPredicted RBP9.62□□□□□ -0.87
COL17A1-205ENST00000480127 LMNB1P20700 586 aa9.62□□□□□ -0.87
COL17A1-205ENST00000480127 NFIXQ14938 502 aa9.62□□□□□ -0.87
COL17A1-205ENST00000480127 SULT6B1Q6IMI4 303 aa9.62□□□□□ -0.87
COL17A1-205ENST00000480127 BCL2L12Q9HB09 334 aa9.62□□□□□ -0.87
COL17A1-205ENST00000480127 POTECB2RU33 542 aa9.61□□□□□ -0.87
COL17A1-205ENST00000480127 ZPR1O75312 459 aa9.61□□□□□ -0.87
COL17A1-205ENST00000480127 HSPA1AP0DMV8 641 aaKnown RBP9.61□□□□□ -0.87
COL17A1-205ENST00000480127 HSPA1BP0DMV9 641 aaKnown RBP9.61□□□□□ -0.87
COL17A1-205ENST00000480127 CYP19A1P11511 503 aaPredicted RBP9.61□□□□□ -0.87
COL17A1-205ENST00000480127 NARFQ9UHQ1 456 aa9.61□□□□□ -0.87
COL17A1-205ENST00000480127 NRXN2Q9P2S2 1712 aa9.61□□□□□ -0.87
COL17A1-205ENST00000480127 NFKBIEO00221 500 aa9.6□□□□□ -0.87
COL17A1-205ENST00000480127 SERPINB2P05120 415 aa9.6□□□□□ -0.87
COL17A1-205ENST00000480127 IL13P35225 146 aa9.6□□□□□ -0.87
COL17A1-205ENST00000480127 TTLL6Q8N841 843 aa9.6□□□□□ -0.87
COL17A1-205ENST00000480127 SLC52A2Q9HAB3 445 aa9.6□□□□□ -0.87
COL17A1-205ENST00000480127 LGR6Q9HBX8 967 aa9.6□□□□□ -0.87
COL17A1-205ENST00000480127 ZBTB1Q9Y2K1 713 aa9.6□□□□□ -0.87
COL17A1-205ENST00000480127 COL15A1P39059 1388 aa9.6□□□□□ -0.87
COL17A1-205ENST00000480127 CARMIL3Q8ND23 1372 aa9.6□□□□□ -0.87
COL17A1-205ENST00000480127 SCN11AQ9UI33 1791 aa9.6□□□□□ -0.87
COL17A1-205ENST00000480127 AFDNP55196 1824 aaKnown RBP9.59□□□□□ -0.87
COL17A1-205ENST00000480127 SLC39A6Q13433 755 aa9.59□□□□□ -0.87
COL17A1-205ENST00000480127 AKAP4Q5JQC9 854 aa9.59□□□□□ -0.87
COL17A1-205ENST00000480127 C2CD5Q86YS7 1000 aa9.59□□□□□ -0.87
COL17A1-205ENST00000480127 DLEC1Q9Y238 1755 aa9.59□□□□□ -0.87
COL17A1-205ENST00000480127 RNMTO43148 476 aaKnown RBP9.58□□□□□ -0.88
COL17A1-205ENST00000480127 MRC1P22897 1456 aa9.58□□□□□ -0.88
COL17A1-205ENST00000480127 TIAM2Q8IVF5 1701 aa9.57□□□□□ -0.88
COL17A1-205ENST00000480127 H0YIN7 160 aa9.57□□□□□ -0.88
COL17A1-205ENST00000480127 VSIG10Q8N0Z9 540 aa9.57□□□□□ -0.88
COL17A1-205ENST00000480127 CANXP27824 592 aaKnown RBP9.56□□□□□ -0.88
COL17A1-205ENST00000480127 EIF5P55010 431 aaKnown RBP9.56□□□□□ -0.88
COL17A1-205ENST00000480127 CC2D1BQ5T0F9 858 aaKnown RBP9.56□□□□□ -0.88
COL17A1-205ENST00000480127 C21orf2O43822 256 aa9.55□□□□□ -0.88
COL17A1-205ENST00000480127 MTHFSDQ2M296 383 aaKnown RBP9.55□□□□□ -0.88
COL17A1-205ENST00000480127 ERFEQ4G0M1 354 aa9.55□□□□□ -0.88
COL17A1-205ENST00000480127 TBC1D9BQ66K14 1250 aa9.55□□□□□ -0.88
COL17A1-205ENST00000480127 DPY19L2Q6NUT2 758 aa9.55□□□□□ -0.88
COL17A1-205ENST00000480127 BICDL1Q6ZP65 573 aa9.55□□□□□ -0.88
COL17A1-205ENST00000480127 CCDC88AQ3V6T2 1871 aa9.55□□□□□ -0.88
COL17A1-205ENST00000480127 ANKRD31Q8N7Z5 1873 aa9.54□□□□□ -0.88
COL17A1-205ENST00000480127 HMOX1P09601 288 aa9.54□□□□□ -0.88
COL17A1-205ENST00000480127 POTEIP0CG38 1075 aa9.54□□□□□ -0.88
COL17A1-205ENST00000480127 POTEJP0CG39 1038 aa9.54□□□□□ -0.88
COL17A1-205ENST00000480127 CHADLQ6NUI6 762 aa9.54□□□□□ -0.88
COL17A1-205ENST00000480127 CCDC24Q8N4L8 307 aa9.54□□□□□ -0.88
COL17A1-205ENST00000480127 ZNF622Q969S3 477 aaKnown RBP eCLIP9.54□□□□□ -0.88
COL17A1-205ENST00000480127 BRIP1Q9BX63 1249 aa9.54□□□□□ -0.88
COL17A1-205ENST00000480127 CREBZFQ9NS37 354 aa9.54□□□□□ -0.88
COL17A1-205ENST00000480127 ZNF219Q9P2Y4 722 aaPredicted RBP9.54□□□□□ -0.88
COL17A1-205ENST00000480127 MKRN1Q9UHC7 482 aaKnown RBP9.54□□□□□ -0.88
COL17A1-205ENST00000480127 PDZRN3Q9UPQ7 1066 aa9.54□□□□□ -0.88
COL17A1-205ENST00000480127 LTBP3Q9NS15 1303 aa9.54□□□□□ -0.88
COL17A1-205ENST00000480127 UBR2Q8IWV8 1755 aa9.53□□□□□ -0.88
COL17A1-205ENST00000480127 U2SURPO15042 1029 aaKnown RBP9.53□□□□□ -0.88
COL17A1-205ENST00000480127 DDNO94850 711 aaPredicted RBP9.53□□□□□ -0.88
COL17A1-205ENST00000480127 PDE6BP35913 854 aa9.53□□□□□ -0.88
COL17A1-205ENST00000480127 PRR5LQ6MZQ0 368 aa9.53□□□□□ -0.88
COL17A1-205ENST00000480127 NPM2Q86SE8 214 aaKnown RBP9.53□□□□□ -0.88
COL17A1-205ENST00000480127 COL11A2P13942 1736 aaPredicted RBP9.53□□□□□ -0.88
COL17A1-205ENST00000480127 FER1L6Q2WGJ9 1857 aa9.53□□□□□ -0.88
COL17A1-205ENST00000480127 A0A087WZG4 1122 aa9.52□□□□□ -0.89
COL17A1-205ENST00000480127 STARD3NLO95772 234 aa9.52□□□□□ -0.89
COL17A1-205ENST00000480127 AMER1Q5JTC6 1135 aaPredicted RBP9.52□□□□□ -0.89
COL17A1-205ENST00000480127 ZNF496Q96IT1 587 aaPredicted RBP9.52□□□□□ -0.89
COL17A1-205ENST00000480127 TBC1D2BQ9UPU7 963 aa9.52□□□□□ -0.89
COL17A1-205ENST00000480127 KIF7Q2M1P5 1343 aa9.52□□□□□ -0.89
COL17A1-205ENST00000480127 PASKQ96RG2 1323 aa9.52□□□□□ -0.89
COL17A1-205ENST00000480127 SCN7AQ01118 1682 aa9.51□□□□□ -0.89
COL17A1-205ENST00000480127 CNTNAP1P78357 1384 aa9.51□□□□□ -0.89
COL17A1-205ENST00000480127 PCNTO95613 3336 aa9.51□□□□□ -0.89
COL17A1-205ENST00000480127 DICER1Q9UPY3 1922 aaKnown RBP9.51□□□□□ -0.89
COL17A1-205ENST00000480127 FOXN1O15353 648 aa9.51□□□□□ -0.89
COL17A1-205ENST00000480127 DIAPH1O60610 1272 aaKnown RBP9.51□□□□□ -0.89
COL17A1-205ENST00000480127 TTC5Q8N0Z6 440 aa9.51□□□□□ -0.89
COL17A1-205ENST00000480127 CFAP53Q96M91 514 aa9.51□□□□□ -0.89
COL17A1-205ENST00000480127 TAOK3Q9H2K8 898 aa9.51□□□□□ -0.89
COL17A1-205ENST00000480127 VIRMAQ69YN4 1812 aaKnown RBP9.51□□□□□ -0.89
COL17A1-205ENST00000480127 HEG1Q9ULI3 1381 aa9.5□□□□□ -0.89
COL17A1-205ENST00000480127 CAMTA2O94983 1202 aa9.5□□□□□ -0.89
COL17A1-205ENST00000480127 SRGNP10124 158 aa9.5□□□□□ -0.89
COL17A1-205ENST00000480127 IL6STP40189 918 aaPredicted RBP9.5□□□□□ -0.89
COL17A1-205ENST00000480127 STYK1Q6J9G0 422 aa9.5□□□□□ -0.89
COL17A1-205ENST00000480127 PRPF40BQ6NWY9 871 aaKnown RBP9.5□□□□□ -0.89
COL17A1-205ENST00000480127 ZNF790Q6PG37 636 aa9.5□□□□□ -0.89
COL17A1-205ENST00000480127 IL17REQ8NFR9 667 aa9.5□□□□□ -0.89
COL17A1-205ENST00000480127 CNKSR1Q969H4 720 aa9.5□□□□□ -0.89
COL17A1-205ENST00000480127 NPHP1O15259 732 aa9.49□□□□□ -0.89
COL17A1-205ENST00000480127 ITGBL1O95965 494 aaPredicted RBP9.49□□□□□ -0.89
COL17A1-205ENST00000480127 A1BGP04217 495 aa9.49□□□□□ -0.89
COL17A1-205ENST00000480127 NEFMP07197 916 aa9.49□□□□□ -0.89
COL17A1-205ENST00000480127 LDHDQ86WU2 507 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms