RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 GRM1Q13255 1194 aa17.01■□□□□ 0.31
USP11-208ENST00000480104 ZNF219Q9P2Y4 722 aaPredicted RBP17.01■□□□□ 0.31
USP11-208ENST00000480104 DLEC1Q9Y238 1755 aa17■□□□□ 0.31
USP11-208ENST00000480104 PAXIP1Q6ZW49 1069 aaPredicted RBP17■□□□□ 0.31
USP11-208ENST00000480104 L3MBTL3Q96JM7 780 aaPredicted RBP17■□□□□ 0.31
USP11-208ENST00000480104 GPR101Q96P66 508 aaPredicted RBP17■□□□□ 0.31
USP11-208ENST00000480104 TERF2IPQ9NYB0 399 aa17■□□□□ 0.31
USP11-208ENST00000480104 MYH14Q7Z406 1995 aaKnown RBP16.99■□□□□ 0.31
USP11-208ENST00000480104 CYP4F22Q6NT55 531 aa16.99■□□□□ 0.31
USP11-208ENST00000480104 C2CD5Q86YS7 1000 aa16.99■□□□□ 0.31
USP11-208ENST00000480104 CLEC11AQ9Y240 323 aa16.99■□□□□ 0.31
USP11-208ENST00000480104 ZNF831Q5JPB2 1677 aa16.99■□□□□ 0.31
USP11-208ENST00000480104 MAP1SQ66K74 1059 aaPredicted RBP16.98■□□□□ 0.31
USP11-208ENST00000480104 DICER1Q9UPY3 1922 aaKnown RBP16.98■□□□□ 0.31
USP11-208ENST00000480104 ECE1P42892 770 aa16.97■□□□□ 0.31
USP11-208ENST00000480104 HSP90AB2PQ58FF8 381 aa16.97■□□□□ 0.31
USP11-208ENST00000480104 CNTROBQ8N137 903 aa16.97■□□□□ 0.31
USP11-208ENST00000480104 SPG7Q9UQ90 795 aa16.97■□□□□ 0.31
USP11-208ENST00000480104 ADAMTSL1Q8N6G6 1762 aa16.97■□□□□ 0.31
USP11-208ENST00000480104 CASP8AP2Q9UKL3 1982 aa16.97■□□□□ 0.31
USP11-208ENST00000480104 C21orf2O43822 256 aa16.96■□□□□ 0.31
USP11-208ENST00000480104 INSRP06213 1382 aa16.96■□□□□ 0.31
USP11-208ENST00000480104 A0A0C4DFX4 3053 aa16.95■□□□□ 0.3
USP11-208ENST00000480104 CARMIL3Q8ND23 1372 aa16.95■□□□□ 0.3
USP11-208ENST00000480104 AOC2O75106 756 aa16.95■□□□□ 0.3
USP11-208ENST00000480104 CRKLP46109 303 aaKnown RBP16.95■□□□□ 0.3
USP11-208ENST00000480104 TAOK3Q9H2K8 898 aa16.95■□□□□ 0.3
USP11-208ENST00000480104 SCN4AP35499 1836 aa16.95■□□□□ 0.3
USP11-208ENST00000480104 LTBP3Q9NS15 1303 aa16.95■□□□□ 0.3
USP11-208ENST00000480104 H0YIN7 160 aa16.94■□□□□ 0.3
USP11-208ENST00000480104 CA12O43570 354 aa16.94■□□□□ 0.3
USP11-208ENST00000480104 PHKG2P15735 406 aa16.93■□□□□ 0.3
USP11-208ENST00000480104 NFIXQ14938 502 aa16.93■□□□□ 0.3
USP11-208ENST00000480104 USPL1Q5W0Q7 1092 aa16.93■□□□□ 0.3
USP11-208ENST00000480104 DDX21Q9NR30 783 aaKnown RBP eCLIP16.93■□□□□ 0.3
USP11-208ENST00000480104 HACL1Q9UJ83 578 aa16.93■□□□□ 0.3
USP11-208ENST00000480104 NCAPD2Q15021 1401 aa16.93■□□□□ 0.3
USP11-208ENST00000480104 FER1L6Q2WGJ9 1857 aa16.93■□□□□ 0.3
USP11-208ENST00000480104 ROCK2O75116 1388 aaKnown RBP16.92■□□□□ 0.3
USP11-208ENST00000480104 AFDNP55196 1824 aaKnown RBP16.92■□□□□ 0.3
USP11-208ENST00000480104 EPHX2P34913 555 aa16.92■□□□□ 0.3
USP11-208ENST00000480104 NRXN2Q9P2S2 1712 aa16.92■□□□□ 0.3
USP11-208ENST00000480104 CUL9Q8IWT3 2517 aa16.92■□□□□ 0.3
USP11-208ENST00000480104 FLT4P35916 1363 aa16.91■□□□□ 0.3
USP11-208ENST00000480104 FMR1Q06787 632 aaKnown RBP eCLIP16.91■□□□□ 0.3
USP11-208ENST00000480104 IFNL2Q8IZJ0 200 aa16.91■□□□□ 0.3
USP11-208ENST00000480104 GCC1Q96CN9 775 aa16.91■□□□□ 0.3
USP11-208ENST00000480104 ZNF541Q9H0D2 1346 aa16.91■□□□□ 0.3
USP11-208ENST00000480104 ADAMTS7Q9UKP4 1686 aa16.91■□□□□ 0.3
USP11-208ENST00000480104 ZPR1O75312 459 aa16.9■□□□□ 0.3
USP11-208ENST00000480104 MAP2K2P36507 400 aa16.9■□□□□ 0.3
USP11-208ENST00000480104 ZNF622Q969S3 477 aaKnown RBP eCLIP16.9■□□□□ 0.3
USP11-208ENST00000480104 SERPINB2P05120 415 aa16.89■□□□□ 0.29
USP11-208ENST00000480104 HABP4Q5JVS0 413 aaKnown RBP16.89■□□□□ 0.29
USP11-208ENST00000480104 PNMA8AQ86V59 439 aaPredicted RBP16.89■□□□□ 0.29
USP11-208ENST00000480104 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.89■□□□□ 0.29
USP11-208ENST00000480104 MKI67P46013 3256 aaKnown RBP16.88■□□□□ 0.29
USP11-208ENST00000480104 PTCD1O75127 700 aaKnown RBP16.88■□□□□ 0.29
USP11-208ENST00000480104 RNF123Q5XPI4 1314 aa16.88■□□□□ 0.29
USP11-208ENST00000480104 INTS5Q6P9B9 1019 aaKnown RBP16.87■□□□□ 0.29
USP11-208ENST00000480104 BRPF1P55201 1214 aaPredicted RBP16.86■□□□□ 0.29
USP11-208ENST00000480104 TLL2Q9Y6L7 1015 aa16.86■□□□□ 0.29
USP11-208ENST00000480104 ERVV-2B6SEH9 535 aa16.85■□□□□ 0.29
USP11-208ENST00000480104 CST9Q5W186 159 aa16.85■□□□□ 0.29
USP11-208ENST00000480104 GGNBP2Q9H3C7 697 aa16.85■□□□□ 0.29
USP11-208ENST00000480104 TONSLQ96HA7 1378 aa16.85■□□□□ 0.29
USP11-208ENST00000480104 NBPF15Q8N660 670 aa16.84■□□□□ 0.29
USP11-208ENST00000480104 SOS1Q07889 1333 aaPredicted RBP16.84■□□□□ 0.29
USP11-208ENST00000480104 KIF24Q5T7B8 1368 aa16.84■□□□□ 0.29
USP11-208ENST00000480104 COL11A2P13942 1736 aaPredicted RBP16.84■□□□□ 0.29
USP11-208ENST00000480104 TRAF5O00463 557 aa16.83■□□□□ 0.28
USP11-208ENST00000480104 TJP1Q07157 1748 aa16.83■□□□□ 0.28
USP11-208ENST00000480104 CIAPIN1Q6FI81 312 aa16.83■□□□□ 0.28
USP11-208ENST00000480104 SZT2Q5T011 3432 aa16.83■□□□□ 0.28
USP11-208ENST00000480104 BCL2L12Q9HB09 334 aa16.82■□□□□ 0.28
USP11-208ENST00000480104 PRPF40BQ6NWY9 871 aaKnown RBP16.81■□□□□ 0.28
USP11-208ENST00000480104 L3MBTL2Q969R5 705 aa16.81■□□□□ 0.28
USP11-208ENST00000480104 NARFQ9UHQ1 456 aa16.81■□□□□ 0.28
USP11-208ENST00000480104 ANKRD31Q8N7Z5 1873 aa16.8■□□□□ 0.28
USP11-208ENST00000480104 FYB1O15117 783 aa16.8■□□□□ 0.28
USP11-208ENST00000480104 EYA1Q99502 592 aa16.8■□□□□ 0.28
USP11-208ENST00000480104 EMILIN1Q9Y6C2 1016 aa16.8■□□□□ 0.28
USP11-208ENST00000480104 COL15A1P39059 1388 aa16.79■□□□□ 0.28
USP11-208ENST00000480104 PDE6BP35913 854 aa16.79■□□□□ 0.28
USP11-208ENST00000480104 FXR1P51114 621 aaKnown RBP eCLIP16.79■□□□□ 0.28
USP11-208ENST00000480104 CABP4P57796 275 aa16.79■□□□□ 0.28
USP11-208ENST00000480104 SOGA3Q5TF21 947 aa16.79■□□□□ 0.28
USP11-208ENST00000480104 SAPCD2Q86UD0 394 aa16.79■□□□□ 0.28
USP11-208ENST00000480104 CCDC24Q8N4L8 307 aa16.79■□□□□ 0.28
USP11-208ENST00000480104 BRIP1Q9BX63 1249 aa16.79■□□□□ 0.28
USP11-208ENST00000480104 ZNF277Q9NRM2 450 aaPredicted RBP16.79■□□□□ 0.28
USP11-208ENST00000480104 PDZRN3Q9UPQ7 1066 aa16.79■□□□□ 0.28
USP11-208ENST00000480104 SLX4Q8IY92 1834 aa16.78■□□□□ 0.28
USP11-208ENST00000480104 DLL1O00548 723 aa16.78■□□□□ 0.28
USP11-208ENST00000480104 BICDL1Q6ZP65 573 aa16.78■□□□□ 0.28
USP11-208ENST00000480104 CNKSR1Q969H4 720 aa16.77■□□□□ 0.28
USP11-208ENST00000480104 DNAJC10Q8IXB1 793 aa16.76■□□□□ 0.27
USP11-208ENST00000480104 PUS7Q96PZ0 661 aaKnown RBP16.76■□□□□ 0.27
USP11-208ENST00000480104 ZIC5Q96T25 663 aa16.76■□□□□ 0.27
USP11-208ENST00000480104 TRPM7Q96QT4 1865 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms