RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 CFAP53Q96M91 514 aa8.98□□□□□ -0.97
FN1-220ENST00000480024 GNAT3A8MTJ3 354 aa8.97□□□□□ -0.97
FN1-220ENST00000480024 POLRMTO00411 1230 aaKnown RBP8.97□□□□□ -0.97
FN1-220ENST00000480024 FCHSD2O94868 740 aa8.97□□□□□ -0.97
FN1-220ENST00000480024 PRKAR2BP31323 418 aa8.97□□□□□ -0.97
FN1-220ENST00000480024 TEFQ10587 303 aa8.97□□□□□ -0.97
FN1-220ENST00000480024 NRXN2Q9P2S2 1712 aa8.97□□□□□ -0.97
FN1-220ENST00000480024 DLEC1Q9Y238 1755 aa8.96□□□□□ -0.97
FN1-220ENST00000480024 CANXP27824 592 aaKnown RBP8.96□□□□□ -0.98
FN1-220ENST00000480024 CHRNA5P30532 468 aa8.96□□□□□ -0.98
FN1-220ENST00000480024 ARHGAP27Q6ZUM4 889 aa8.96□□□□□ -0.98
FN1-220ENST00000480024 VSIG10Q8N0Z9 540 aa8.96□□□□□ -0.98
FN1-220ENST00000480024 IL17REQ8NFR9 667 aa8.96□□□□□ -0.98
FN1-220ENST00000480024 ZNF496Q96IT1 587 aaPredicted RBP8.96□□□□□ -0.98
FN1-220ENST00000480024 ZNF330Q9Y3S2 320 aaPredicted RBP8.96□□□□□ -0.98
FN1-220ENST00000480024 BCORQ6W2J9 1755 aa8.95□□□□□ -0.98
FN1-220ENST00000480024 U2AF1L5P0DN76 240 aaPredicted RBP8.95□□□□□ -0.98
FN1-220ENST00000480024 KCNA3P22001 575 aa8.95□□□□□ -0.98
FN1-220ENST00000480024 PPP2R1AP30153 589 aa8.95□□□□□ -0.98
FN1-220ENST00000480024 U2AF1Q01081 240 aaKnown RBP eCLIP8.95□□□□□ -0.98
FN1-220ENST00000480024 NFIXQ14938 502 aa8.95□□□□□ -0.98
FN1-220ENST00000480024 ZNF790Q6PG37 636 aa8.95□□□□□ -0.98
FN1-220ENST00000480024 PHACTR3Q96KR7 559 aa8.95□□□□□ -0.98
FN1-220ENST00000480024 RSPH6AQ9H0K4 717 aa8.95□□□□□ -0.98
FN1-220ENST00000480024 PIM2Q9P1W9 311 aa8.95□□□□□ -0.98
FN1-220ENST00000480024 NARFQ9UHQ1 456 aa8.95□□□□□ -0.98
FN1-220ENST00000480024 CEMIPQ8WUJ3 1361 aa8.95□□□□□ -0.98
FN1-220ENST00000480024 HEG1Q9ULI3 1381 aa8.95□□□□□ -0.98
FN1-220ENST00000480024 STARD3NLO95772 234 aa8.94□□□□□ -0.98
FN1-220ENST00000480024 TM4SF1P30408 202 aa8.94□□□□□ -0.98
FN1-220ENST00000480024 DALRD3Q5D0E6 543 aaKnown RBP8.94□□□□□ -0.98
FN1-220ENST00000480024 BICDL1Q6ZP65 573 aa8.94□□□□□ -0.98
FN1-220ENST00000480024 BCL2L12Q9HB09 334 aa8.94□□□□□ -0.98
FN1-220ENST00000480024 NUDCQ9Y266 331 aa8.94□□□□□ -0.98
FN1-220ENST00000480024 CARMIL3Q8ND23 1372 aa8.94□□□□□ -0.98
FN1-220ENST00000480024 COL11A2P13942 1736 aaPredicted RBP8.94□□□□□ -0.98
FN1-220ENST00000480024 SBF1O95248 1867 aa8.94□□□□□ -0.98
FN1-220ENST00000480024 ANKRD31Q8N7Z5 1873 aa8.94□□□□□ -0.98
FN1-220ENST00000480024 SERPINB2P05120 415 aa8.93□□□□□ -0.98
FN1-220ENST00000480024 C9orf131Q5VYM1 1079 aa8.93□□□□□ -0.98
FN1-220ENST00000480024 MCM10Q7L590 875 aa8.93□□□□□ -0.98
FN1-220ENST00000480024 FMNL2Q96PY5 1086 aa8.93□□□□□ -0.98
FN1-220ENST00000480024 DLG5Q8TDM6 1919 aa8.93□□□□□ -0.98
FN1-220ENST00000480024 CACNA1SQ13698 1873 aa8.92□□□□□ -0.98
FN1-220ENST00000480024 TIAM2Q8IVF5 1701 aa8.92□□□□□ -0.98
FN1-220ENST00000480024 A0A087WZG4 1122 aa8.92□□□□□ -0.98
FN1-220ENST00000480024 BTBD11A6QL63 1104 aa8.92□□□□□ -0.98
FN1-220ENST00000480024 KIF3CO14782 793 aa8.92□□□□□ -0.98
FN1-220ENST00000480024 KCNQ3O43525 872 aa8.92□□□□□ -0.98
FN1-220ENST00000480024 EIF5P55010 431 aaKnown RBP8.92□□□□□ -0.98
FN1-220ENST00000480024 TBC1D2BQ9UPU7 963 aa8.92□□□□□ -0.98
FN1-220ENST00000480024 LAMB4A4D0S4 1761 aa8.91□□□□□ -0.98
FN1-220ENST00000480024 TNRC6CQ9HCJ0 1690 aaKnown RBP8.91□□□□□ -0.98
FN1-220ENST00000480024 PIP4K2AP48426 406 aaPredicted RBP8.91□□□□□ -0.98
FN1-220ENST00000480024 RASSF7Q02833 373 aa8.91□□□□□ -0.98
FN1-220ENST00000480024 DCTN1Q14203 1278 aa8.91□□□□□ -0.98
FN1-220ENST00000480024 TBC1D9BQ66K14 1250 aa8.91□□□□□ -0.98
FN1-220ENST00000480024 RTF1Q92541 710 aaKnown RBP8.91□□□□□ -0.98
FN1-220ENST00000480024 TEX13AQ9BXU3 409 aaPredicted RBP8.91□□□□□ -0.98
FN1-220ENST00000480024 NMRK2Q9NPI5 230 aa8.91□□□□□ -0.98
FN1-220ENST00000480024 RNF181Q9P0P0 153 aa8.91□□□□□ -0.98
FN1-220ENST00000480024 CCDC88AQ3V6T2 1871 aa8.9□□□□□ -0.98
FN1-220ENST00000480024 PRAMEF22A3QJZ6 481 aa8.9□□□□□ -0.98
FN1-220ENST00000480024 A1BGP04217 495 aa8.9□□□□□ -0.98
FN1-220ENST00000480024 HSPA6P17066 643 aa8.9□□□□□ -0.98
FN1-220ENST00000480024 IL6STP40189 918 aaPredicted RBP8.9□□□□□ -0.98
FN1-220ENST00000480024 NPM2Q86SE8 214 aaKnown RBP8.9□□□□□ -0.98
FN1-220ENST00000480024 C2CD5Q86YS7 1000 aa8.9□□□□□ -0.98
FN1-220ENST00000480024 CCDC24Q8N4L8 307 aa8.9□□□□□ -0.98
FN1-220ENST00000480024 KDM3BQ7LBC6 1761 aa8.89□□□□□ -0.99
FN1-220ENST00000480024 NPHP1O15259 732 aa8.89□□□□□ -0.99
FN1-220ENST00000480024 CAMTA2O94983 1202 aa8.89□□□□□ -0.99
FN1-220ENST00000480024 DZIP3Q86Y13 1208 aaKnown RBP8.89□□□□□ -0.99
FN1-220ENST00000480024 H0YIN7 160 aa8.88□□□□□ -0.99
FN1-220ENST00000480024 PRR5LQ6MZQ0 368 aa8.88□□□□□ -0.99
FN1-220ENST00000480024 TTLL6Q8N841 843 aa8.88□□□□□ -0.99
FN1-220ENST00000480024 CNBD1Q8NA66 436 aa8.88□□□□□ -0.99
FN1-220ENST00000480024 USP16Q9Y5T5 823 aa8.88□□□□□ -0.99
FN1-220ENST00000480024 ARFGEF2Q9Y6D5 1785 aa8.88□□□□□ -0.99
FN1-220ENST00000480024 KDM2BQ8NHM5 1336 aa8.87□□□□□ -0.99
FN1-220ENST00000480024 TOMM70O94826 608 aa8.87□□□□□ -0.99
FN1-220ENST00000480024 NEFMP07197 916 aa8.87□□□□□ -0.99
FN1-220ENST00000480024 SNRPA1P09661 255 aaKnown RBP8.87□□□□□ -0.99
FN1-220ENST00000480024 C16orf71Q8IYS4 520 aaPredicted RBP8.87□□□□□ -0.99
FN1-220ENST00000480024 ZNF622Q969S3 477 aaKnown RBP eCLIP8.87□□□□□ -0.99
FN1-220ENST00000480024 SETDB2Q96T68 719 aa8.87□□□□□ -0.99
FN1-220ENST00000480024 BRIP1Q9BX63 1249 aa8.87□□□□□ -0.99
FN1-220ENST00000480024 ZNF219Q9P2Y4 722 aaPredicted RBP8.87□□□□□ -0.99
FN1-220ENST00000480024 WDR90Q96KV7 1748 aa8.87□□□□□ -0.99
FN1-220ENST00000480024 FER1L6Q2WGJ9 1857 aa8.87□□□□□ -0.99
FN1-220ENST00000480024 SLX4Q8IY92 1834 aa8.87□□□□□ -0.99
FN1-220ENST00000480024 NFKBIEO00221 500 aa8.86□□□□□ -0.99
FN1-220ENST00000480024 HTATSF1O43719 755 aaKnown RBP8.86□□□□□ -0.99
FN1-220ENST00000480024 LMNB1P20700 586 aa8.86□□□□□ -0.99
FN1-220ENST00000480024 PDE6BP35913 854 aa8.86□□□□□ -0.99
FN1-220ENST00000480024 PRELPP51888 382 aa8.86□□□□□ -0.99
FN1-220ENST00000480024 ST5P78524 1137 aa8.86□□□□□ -0.99
FN1-220ENST00000480024 THUMPD2Q9BTF0 503 aaKnown RBP8.86□□□□□ -0.99
FN1-220ENST00000480024 MIS18AQ9NYP9 233 aa8.86□□□□□ -0.99
FN1-220ENST00000480024 DICER1Q9UPY3 1922 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms