RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 GNAI3P08754 354 aa16.2■□□□□ 0.18
C9orf78-205ENST00000480023 RUFY3Q7L099 469 aa16.2■□□□□ 0.18
C9orf78-205ENST00000480023 CGNQ9P2M7 1197 aaKnown RBP16.2■□□□□ 0.18
C9orf78-205ENST00000480023 SMC3Q9UQE7 1217 aa16.2■□□□□ 0.18
C9orf78-205ENST00000480023 XRN1Q8IZH2 1706 aaKnown RBP16.2■□□□□ 0.18
C9orf78-205ENST00000480023 RIMBP3CA6NJZ7 1639 aa16.19■□□□□ 0.18
C9orf78-205ENST00000480023 RIMBP3BA6NNM3 1639 aa16.19■□□□□ 0.18
C9orf78-205ENST00000480023 RIMBP3Q9UFD9 1639 aa16.19■□□□□ 0.18
C9orf78-205ENST00000480023 SGSM2O43147 1006 aa16.19■□□□□ 0.18
C9orf78-205ENST00000480023 AEBP1Q8IUX7 1158 aa16.19■□□□□ 0.18
C9orf78-205ENST00000480023 SPC24Q8NBT2 197 aa16.19■□□□□ 0.18
C9orf78-205ENST00000480023 COG3Q96JB2 828 aa16.19■□□□□ 0.18
C9orf78-205ENST00000480023 MTMR6Q9Y217 621 aa16.19■□□□□ 0.18
C9orf78-205ENST00000480023 PAXBP1Q9Y5B6 917 aa16.19■□□□□ 0.18
C9orf78-205ENST00000480023 RGPD1P0DJD0 1748 aa16.19■□□□□ 0.18
C9orf78-205ENST00000480023 CRYBG1Q9Y4K1 1723 aa16.19■□□□□ 0.18
C9orf78-205ENST00000480023 DIP2CQ9Y2E4 1556 aa16.19■□□□□ 0.18
C9orf78-205ENST00000480023 PTGS1P23219 599 aa16.19■□□□□ 0.18
C9orf78-205ENST00000480023 G2E3Q7L622 706 aa16.19■□□□□ 0.18
C9orf78-205ENST00000480023 CPS1P31327 1500 aa16.19■□□□□ 0.18
C9orf78-205ENST00000480023 ITSN1Q15811 1721 aa16.18■□□□□ 0.18
C9orf78-205ENST00000480023 PNMA6EA0A0J9YXQ4 647 aa16.18■□□□□ 0.18
C9orf78-205ENST00000480023 F6X3S4 739 aa16.18■□□□□ 0.18
C9orf78-205ENST00000480023 SLC4A10Q6U841 1118 aa16.18■□□□□ 0.18
C9orf78-205ENST00000480023 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.18■□□□□ 0.18
C9orf78-205ENST00000480023 RTF1Q92541 710 aaKnown RBP16.18■□□□□ 0.18
C9orf78-205ENST00000480023 MORC2Q9Y6X9 1032 aaPredicted RBP16.18■□□□□ 0.18
C9orf78-205ENST00000480023 CCDC171Q6TFL3 1326 aa16.18■□□□□ 0.18
C9orf78-205ENST00000480023 DNM1Q05193 864 aaKnown RBP16.18■□□□□ 0.18
C9orf78-205ENST00000480023 RRS1Q15050 365 aaKnown RBP16.18■□□□□ 0.18
C9orf78-205ENST00000480023 MCM10Q7L590 875 aa16.18■□□□□ 0.18
C9orf78-205ENST00000480023 LSG1Q9H089 658 aaKnown RBP16.18■□□□□ 0.18
C9orf78-205ENST00000480023 SETD1AO15047 1707 aaKnown RBP16.17■□□□□ 0.18
C9orf78-205ENST00000480023 ELP1O95163 1332 aa16.17■□□□□ 0.18
C9orf78-205ENST00000480023 AKAP12Q02952 1782 aa16.17■□□□□ 0.18
C9orf78-205ENST00000480023 PDIA4P13667 645 aaKnown RBP16.17■□□□□ 0.18
C9orf78-205ENST00000480023 ZRANB1Q9UGI0 708 aa16.17■□□□□ 0.18
C9orf78-205ENST00000480023 MRVI1Q9Y6F6 885 aa16.17■□□□□ 0.18
C9orf78-205ENST00000480023 PXDNLA1KZ92 1463 aa16.16■□□□□ 0.18
C9orf78-205ENST00000480023 FAM208AQ9UK61 1670 aaKnown RBP16.16■□□□□ 0.18
C9orf78-205ENST00000480023 EIF4A2Q14240 407 aaKnown RBP16.16■□□□□ 0.18
C9orf78-205ENST00000480023 MAP3K11Q16584 847 aa16.16■□□□□ 0.18
C9orf78-205ENST00000480023 SULT6B1Q6IMI4 303 aa16.16■□□□□ 0.18
C9orf78-205ENST00000480023 PLA2G4DQ86XP0 818 aa16.16■□□□□ 0.18
C9orf78-205ENST00000480023 HYPKQ9NX55 129 aa16.16■□□□□ 0.18
C9orf78-205ENST00000480023 SOS1Q07889 1333 aaPredicted RBP16.15■□□□□ 0.18
C9orf78-205ENST00000480023 SLFN14P0C7P3 912 aa16.15■□□□□ 0.18
C9orf78-205ENST00000480023 TYRO3Q06418 890 aa16.15■□□□□ 0.18
C9orf78-205ENST00000480023 ZNF771Q7L3S4 317 aaPredicted RBP16.15■□□□□ 0.18
C9orf78-205ENST00000480023 CCDC186Q7Z3E2 898 aa16.15■□□□□ 0.18
C9orf78-205ENST00000480023 RASEFQ8IZ41 740 aa16.15■□□□□ 0.18
C9orf78-205ENST00000480023 SH2B1Q9NRF2 756 aaPredicted RBP16.15■□□□□ 0.18
C9orf78-205ENST00000480023 GJB2P29033 226 aa16.15■□□□□ 0.18
C9orf78-205ENST00000480023 RBM43Q6ZSC3 357 aaKnown RBP16.15■□□□□ 0.18
C9orf78-205ENST00000480023 PI4K2BQ8TCG2 481 aa16.15■□□□□ 0.18
C9orf78-205ENST00000480023 ZSCAN31Q96LW9 406 aaPredicted RBP16.15■□□□□ 0.18
C9orf78-205ENST00000480023 NUP62CLQ9H1M0 184 aa16.15■□□□□ 0.18
C9orf78-205ENST00000480023 SPATA31D1Q6ZQQ2 1576 aa16.15■□□□□ 0.18
C9orf78-205ENST00000480023 TNNT1P13805 278 aa16.14■□□□□ 0.17
C9orf78-205ENST00000480023 VPS53Q5VIR6 699 aa16.14■□□□□ 0.17
C9orf78-205ENST00000480023 ZSCAN25Q6NSZ9 544 aa16.14■□□□□ 0.17
C9orf78-205ENST00000480023 CCDC112Q8NEF3 446 aa16.14■□□□□ 0.17
C9orf78-205ENST00000480023 KIF18AQ8NI77 898 aa16.14■□□□□ 0.17
C9orf78-205ENST00000480023 C16orf45Q96MC5 204 aaPredicted RBP16.14■□□□□ 0.17
C9orf78-205ENST00000480023 CHD2O14647 1828 aaKnown RBP16.14■□□□□ 0.17
C9orf78-205ENST00000480023 CACNA1FO60840 1977 aa16.14■□□□□ 0.17
C9orf78-205ENST00000480023 LARGE1O95461 756 aa16.13■□□□□ 0.17
C9orf78-205ENST00000480023 TDRD7Q8NHU6 1098 aaKnown RBP16.13■□□□□ 0.17
C9orf78-205ENST00000480023 WASLO00401 505 aaPredicted RBP16.13■□□□□ 0.17
C9orf78-205ENST00000480023 IGSF3O75054 1194 aa16.13■□□□□ 0.17
C9orf78-205ENST00000480023 RAB11FIP3O75154 756 aa16.13■□□□□ 0.17
C9orf78-205ENST00000480023 ZNF75DP51815 510 aa16.13■□□□□ 0.17
C9orf78-205ENST00000480023 LUZP1Q86V48 1076 aa16.13■□□□□ 0.17
C9orf78-205ENST00000480023 SSH3Q8TE77 659 aa16.13■□□□□ 0.17
C9orf78-205ENST00000480023 TM6SF1Q9BZW5 370 aa16.13■□□□□ 0.17
C9orf78-205ENST00000480023 FAM53CQ9NYF3 392 aa16.13■□□□□ 0.17
C9orf78-205ENST00000480023 GTF2E1P29083 439 aaPredicted RBP16.12■□□□□ 0.17
C9orf78-205ENST00000480023 CDC25BP30305 580 aa16.12■□□□□ 0.17
C9orf78-205ENST00000480023 FAM193AP78312 1265 aa16.12■□□□□ 0.17
C9orf78-205ENST00000480023 LRMPQ12912 555 aa16.12■□□□□ 0.17
C9orf78-205ENST00000480023 WAPLQ7Z5K2 1190 aa16.12■□□□□ 0.17
C9orf78-205ENST00000480023 TTC6Q86TZ1 520 aa16.12■□□□□ 0.17
C9orf78-205ENST00000480023 KCNB2Q92953 911 aa16.12■□□□□ 0.17
C9orf78-205ENST00000480023 CBX8Q9HC52 389 aa16.12■□□□□ 0.17
C9orf78-205ENST00000480023 ADGRL3Q9HAR2 1447 aa16.12■□□□□ 0.17
C9orf78-205ENST00000480023 TTC21AQ8NDW8 1320 aa16.12■□□□□ 0.17
C9orf78-205ENST00000480023 KRT85P78386 507 aa16.12■□□□□ 0.17
C9orf78-205ENST00000480023 SENP3Q9H4L4 574 aaPredicted RBP16.12■□□□□ 0.17
C9orf78-205ENST00000480023 FLIIQ13045 1269 aa16.11■□□□□ 0.17
C9orf78-205ENST00000480023 TERF2Q15554 542 aa16.11■□□□□ 0.17
C9orf78-205ENST00000480023 TPRNQ4KMQ1 711 aa16.11■□□□□ 0.17
C9orf78-205ENST00000480023 CCDC83Q8IWF9 413 aa16.11■□□□□ 0.17
C9orf78-205ENST00000480023 STK31Q9BXU1 1019 aa16.11■□□□□ 0.17
C9orf78-205ENST00000480023 TMEM51Q9NW97 253 aa16.11■□□□□ 0.17
C9orf78-205ENST00000480023 LRRFIP2Q9Y608 721 aaKnown RBP16.11■□□□□ 0.17
C9orf78-205ENST00000480023 CASTP20810 708 aaKnown RBP16.1■□□□□ 0.17
C9orf78-205ENST00000480023 ST3GAL1Q11201 340 aa16.1■□□□□ 0.17
C9orf78-205ENST00000480023 CNTROBQ8N137 903 aa16.1■□□□□ 0.17
C9orf78-205ENST00000480023 KRT222Q8N1A0 295 aa16.1■□□□□ 0.17
C9orf78-205ENST00000480023 ZNF397Q8NF99 534 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms