RNA–Protein interactions for RNA: ENST00000479598.5

SLC40A1-207, Transcript of solute carrier family 40 member 1, humanhuman

TSL 1 (best)

Gene SLC40A1, Length 993 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-207ENST00000479598 PDE4AP27815 886 aa12.83□□□□□ -0.36
SLC40A1-207ENST00000479598 ADAMTS7Q9UKP4 1686 aa12.83□□□□□ -0.36
SLC40A1-207ENST00000479598 LOC102724428A0A0B4J2F2 783 aa12.82□□□□□ -0.36
SLC40A1-207ENST00000479598 SIK1P57059 783 aa12.82□□□□□ -0.36
SLC40A1-207ENST00000479598 CABP4P57796 275 aa12.82□□□□□ -0.36
SLC40A1-207ENST00000479598 CENPQQ7L2Z9 268 aaPredicted RBP12.82□□□□□ -0.36
SLC40A1-207ENST00000479598 NFATC2IPQ8NCF5 419 aa12.82□□□□□ -0.36
SLC40A1-207ENST00000479598 AK7Q96M32 723 aa12.82□□□□□ -0.36
SLC40A1-207ENST00000479598 RNF216Q9NWF9 866 aaPredicted RBP12.82□□□□□ -0.36
SLC40A1-207ENST00000479598 ASAP1Q9ULH1 1129 aa12.82□□□□□ -0.36
SLC40A1-207ENST00000479598 GOLGB1Q14789 3259 aaKnown RBP12.82□□□□□ -0.36
SLC40A1-207ENST00000479598 APAF1O14727 1248 aa12.81□□□□□ -0.36
SLC40A1-207ENST00000479598 HTATSF1O43719 755 aaKnown RBP12.81□□□□□ -0.36
SLC40A1-207ENST00000479598 TMPOP42166 694 aaKnown RBP12.81□□□□□ -0.36
SLC40A1-207ENST00000479598 GPR162Q16538 588 aa12.81□□□□□ -0.36
SLC40A1-207ENST00000479598 C20orf194Q5TEA3 1177 aa12.81□□□□□ -0.36
SLC40A1-207ENST00000479598 KLHL34Q8N239 644 aa12.81□□□□□ -0.36
SLC40A1-207ENST00000479598 SLC52A2Q9HAB3 445 aa12.81□□□□□ -0.36
SLC40A1-207ENST00000479598 ATG3Q9NT62 314 aa12.81□□□□□ -0.36
SLC40A1-207ENST00000479598 COL5A3P25940 1745 aaPredicted RBP12.81□□□□□ -0.36
SLC40A1-207ENST00000479598 ATP6V1AP38606 617 aa12.8□□□□□ -0.36
SLC40A1-207ENST00000479598 RIPK4P57078 832 aa12.8□□□□□ -0.36
SLC40A1-207ENST00000479598 DCTN1Q14203 1278 aa12.8□□□□□ -0.36
SLC40A1-207ENST00000479598 MCM10Q7L590 875 aa12.8□□□□□ -0.36
SLC40A1-207ENST00000479598 RTF1Q92541 710 aaKnown RBP12.8□□□□□ -0.36
SLC40A1-207ENST00000479598 RRP7AQ9Y3A4 280 aaKnown RBP12.8□□□□□ -0.36
SLC40A1-207ENST00000479598 SSFA2P28290 1259 aa12.79□□□□□ -0.36
SLC40A1-207ENST00000479598 CACNB1Q02641 598 aaPredicted RBP12.79□□□□□ -0.36
SLC40A1-207ENST00000479598 LINC00116Q8NCU8 138 aa12.79□□□□□ -0.36
SLC40A1-207ENST00000479598 MYH14Q7Z406 1995 aaKnown RBP12.79□□□□□ -0.36
SLC40A1-207ENST00000479598 CEMIPQ8WUJ3 1361 aa12.79□□□□□ -0.36
SLC40A1-207ENST00000479598 SIPA1L3O60292 1781 aaPredicted RBP12.79□□□□□ -0.36
SLC40A1-207ENST00000479598 MRC1P22897 1456 aa12.78□□□□□ -0.36
SLC40A1-207ENST00000479598 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.78□□□□□ -0.36
SLC40A1-207ENST00000479598 TEFQ10587 303 aa12.78□□□□□ -0.36
SLC40A1-207ENST00000479598 ITPK1Q13572 414 aa12.78□□□□□ -0.36
SLC40A1-207ENST00000479598 NEUROD2Q15784 382 aa12.78□□□□□ -0.36
SLC40A1-207ENST00000479598 MSL1Q68DK7 614 aa12.78□□□□□ -0.36
SLC40A1-207ENST00000479598 AMIGO3Q86WK7 504 aa12.78□□□□□ -0.36
SLC40A1-207ENST00000479598 NLGN2Q8NFZ4 835 aa12.78□□□□□ -0.36
SLC40A1-207ENST00000479598 ZBTB47Q9UFB7 747 aaPredicted RBP12.78□□□□□ -0.36
SLC40A1-207ENST00000479598 CD2APQ9Y5K6 639 aa12.78□□□□□ -0.36
SLC40A1-207ENST00000479598 SPINK5Q9NQ38 1064 aaPredicted RBP12.77□□□□□ -0.37
SLC40A1-207ENST00000479598 PHF14O94880 888 aa12.76□□□□□ -0.37
SLC40A1-207ENST00000479598 SLC39A6Q13433 755 aa12.76□□□□□ -0.37
SLC40A1-207ENST00000479598 ZNF784Q8NCA9 323 aaPredicted RBP12.76□□□□□ -0.37
SLC40A1-207ENST00000479598 THUMPD2Q9BTF0 503 aaKnown RBP12.76□□□□□ -0.37
SLC40A1-207ENST00000479598 TRIM35Q9UPQ4 493 aa12.76□□□□□ -0.37
SLC40A1-207ENST00000479598 KIF13BQ9NQT8 1826 aa12.76□□□□□ -0.37
SLC40A1-207ENST00000479598 GRIN3BO60391 1043 aa12.75□□□□□ -0.37
SLC40A1-207ENST00000479598 LMOD3Q0VAK6 560 aa12.75□□□□□ -0.37
SLC40A1-207ENST00000479598 PDE3AQ14432 1141 aa12.75□□□□□ -0.37
SLC40A1-207ENST00000479598 CCDC27Q2M243 656 aa12.75□□□□□ -0.37
SLC40A1-207ENST00000479598 RC3H1Q5TC82 1133 aaKnown RBP12.75□□□□□ -0.37
SLC40A1-207ENST00000479598 RBM42Q9BTD8 480 aaKnown RBP12.75□□□□□ -0.37
SLC40A1-207ENST00000479598 FOXD4L1Q9NU39 408 aa12.75□□□□□ -0.37
SLC40A1-207ENST00000479598 CICQ96RK0 1608 aaPredicted RBP12.74□□□□□ -0.37
SLC40A1-207ENST00000479598 BTBD11A6QL63 1104 aa12.74□□□□□ -0.37
SLC40A1-207ENST00000479598 GNPATO15228 680 aa12.74□□□□□ -0.37
SLC40A1-207ENST00000479598 TAF7Q15545 349 aaPredicted RBP12.74□□□□□ -0.37
SLC40A1-207ENST00000479598 TRAPPC3LQ5T215 181 aa12.74□□□□□ -0.37
SLC40A1-207ENST00000479598 SMIM5Q71RC9 77 aa12.74□□□□□ -0.37
SLC40A1-207ENST00000479598 WWC1Q8IX03 1113 aa12.74□□□□□ -0.37
SLC40A1-207ENST00000479598 SLC4A9Q96Q91 983 aa12.74□□□□□ -0.37
SLC40A1-207ENST00000479598 C4AP0C0L4 1744 aa12.74□□□□□ -0.37
SLC40A1-207ENST00000479598 KCNQ3O43525 872 aa12.73□□□□□ -0.37
SLC40A1-207ENST00000479598 PTCD1O75127 700 aaKnown RBP12.73□□□□□ -0.37
SLC40A1-207ENST00000479598 WDR63Q8IWG1 891 aa12.73□□□□□ -0.37
SLC40A1-207ENST00000479598 MIS18AQ9NYP9 233 aa12.73□□□□□ -0.37
SLC40A1-207ENST00000479598 RTCBQ9Y3I0 505 aaKnown RBP12.73□□□□□ -0.37
SLC40A1-207ENST00000479598 TJP1Q07157 1748 aa12.73□□□□□ -0.37
SLC40A1-207ENST00000479598 CNTNAP4Q9C0A0 1308 aa12.72□□□□□ -0.37
SLC40A1-207ENST00000479598 YBX3P16989 372 aaKnown RBP eCLIP12.72□□□□□ -0.37
SLC40A1-207ENST00000479598 AAMPQ13685 434 aa12.72□□□□□ -0.37
SLC40A1-207ENST00000479598 ZNF790Q6PG37 636 aa12.72□□□□□ -0.37
SLC40A1-207ENST00000479598 DDRGK1Q96HY6 314 aa12.72□□□□□ -0.37
SLC40A1-207ENST00000479598 N4BP2Q86UW6 1770 aaPredicted RBP12.71□□□□□ -0.37
SLC40A1-207ENST00000479598 UBR2Q8IWV8 1755 aa12.71□□□□□ -0.37
SLC40A1-207ENST00000479598 RPS6KA4O75676 772 aa12.71□□□□□ -0.37
SLC40A1-207ENST00000479598 TTC5Q8N0Z6 440 aa12.71□□□□□ -0.37
SLC40A1-207ENST00000479598 KCPQ6ZWJ8 1503 aa12.71□□□□□ -0.38
SLC40A1-207ENST00000479598 FAM161AQ3B820 660 aa12.7□□□□□ -0.38
SLC40A1-207ENST00000479598 NLGN1Q8N2Q7 840 aa12.7□□□□□ -0.38
SLC40A1-207ENST00000479598 ARHGEF1Q92888 912 aaKnown RBP12.7□□□□□ -0.38
SLC40A1-207ENST00000479598 ZNF496Q96IT1 587 aaPredicted RBP12.7□□□□□ -0.38
SLC40A1-207ENST00000479598 KIAA1551Q9HCM1 1747 aa12.69□□□□□ -0.38
SLC40A1-207ENST00000479598 BCAR3O75815 825 aa12.69□□□□□ -0.38
SLC40A1-207ENST00000479598 RFC4P35249 363 aa12.69□□□□□ -0.38
SLC40A1-207ENST00000479598 BABAM1Q9NWV8 329 aa12.69□□□□□ -0.38
SLC40A1-207ENST00000479598 BRCA1P38398 1863 aaKnown RBP12.69□□□□□ -0.38
SLC40A1-207ENST00000479598 KDM3BQ7LBC6 1761 aa12.69□□□□□ -0.38
SLC40A1-207ENST00000479598 CHL1O00533 1208 aa12.68□□□□□ -0.38
SLC40A1-207ENST00000479598 MMP10P09238 476 aa12.68□□□□□ -0.38
SLC40A1-207ENST00000479598 NPM2Q86SE8 214 aaKnown RBP12.68□□□□□ -0.38
SLC40A1-207ENST00000479598 DNAJC10Q8IXB1 793 aa12.68□□□□□ -0.38
SLC40A1-207ENST00000479598 VSIG10Q8N0Z9 540 aa12.68□□□□□ -0.38
SLC40A1-207ENST00000479598 FMNL2Q96PY5 1086 aa12.68□□□□□ -0.38
SLC40A1-207ENST00000479598 TSPYL4Q9UJ04 414 aa12.68□□□□□ -0.38
SLC40A1-207ENST00000479598 HEG1Q9ULI3 1381 aa12.68□□□□□ -0.38
SLC40A1-207ENST00000479598 CRKLP46109 303 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms