RNA–Protein interactions for RNA: ENST00000479234.1

SCAF8-206, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-206ENST00000479234 EXOSC9Q06265 439 aaKnown RBP8.05□□□□□ -1.12
SCAF8-206ENST00000479234 MVPQ14764 893 aaKnown RBP8.05□□□□□ -1.12
SCAF8-206ENST00000479234 ALDH1L2Q3SY69 923 aa8.05□□□□□ -1.12
SCAF8-206ENST00000479234 RTL5Q5HYW3 569 aaPredicted RBP8.05□□□□□ -1.12
SCAF8-206ENST00000479234 ZNF697Q5TEC3 545 aa8.05□□□□□ -1.12
SCAF8-206ENST00000479234 SKAP1Q86WV1 359 aa8.05□□□□□ -1.12
SCAF8-206ENST00000479234 POLKQ9UBT6 870 aa8.05□□□□□ -1.12
SCAF8-206ENST00000479234 AATKQ6ZMQ8 1374 aa8.05□□□□□ -1.12
SCAF8-206ENST00000479234 MYO5BQ9ULV0 1848 aa8.05□□□□□ -1.12
SCAF8-206ENST00000479234 CPSF1Q10570 1443 aaKnown RBP8.04□□□□□ -1.12
SCAF8-206ENST00000479234 EDC4Q6P2E9 1401 aaKnown RBP8.04□□□□□ -1.12
SCAF8-206ENST00000479234 ANKRD26Q9UPS8 1709 aa8.04□□□□□ -1.12
SCAF8-206ENST00000479234 TESPA1A2RU30 521 aaPredicted RBP8.04□□□□□ -1.12
SCAF8-206ENST00000479234 ACTN4O43707 911 aaKnown RBP8.04□□□□□ -1.12
SCAF8-206ENST00000479234 S1PR4O95977 384 aa8.04□□□□□ -1.12
SCAF8-206ENST00000479234 RLBP1P12271 317 aa8.04□□□□□ -1.12
SCAF8-206ENST00000479234 MLECQ14165 292 aa8.04□□□□□ -1.12
SCAF8-206ENST00000479234 NUDT16Q96DE0 195 aaKnown RBP8.04□□□□□ -1.12
SCAF8-206ENST00000479234 RSPH6AQ9H0K4 717 aa8.04□□□□□ -1.12
SCAF8-206ENST00000479234 TMEM134Q9H6X4 195 aa8.04□□□□□ -1.12
SCAF8-206ENST00000479234 DAXXQ9UER7 740 aaPredicted RBP8.04□□□□□ -1.12
SCAF8-206ENST00000479234 PCDHB15Q9Y5E8 787 aa8.04□□□□□ -1.12
SCAF8-206ENST00000479234 TECPR2O15040 1411 aa8.03□□□□□ -1.12
SCAF8-206ENST00000479234 CDC42BPGQ6DT37 1551 aa8.03□□□□□ -1.12
SCAF8-206ENST00000479234 TNRQ92752 1358 aa8.03□□□□□ -1.12
SCAF8-206ENST00000479234 FAM187AA6NFU0 413 aa8.03□□□□□ -1.12
SCAF8-206ENST00000479234 TULP1O00294 542 aaPredicted RBP8.03□□□□□ -1.12
SCAF8-206ENST00000479234 GDF9O60383 454 aa8.03□□□□□ -1.12
SCAF8-206ENST00000479234 ADH1BP00325 375 aa8.03□□□□□ -1.12
SCAF8-206ENST00000479234 IL13P35225 146 aa8.03□□□□□ -1.12
SCAF8-206ENST00000479234 HDAC1Q13547 482 aaPredicted RBP8.03□□□□□ -1.12
SCAF8-206ENST00000479234 NFE2L2Q16236 605 aa8.03□□□□□ -1.12
SCAF8-206ENST00000479234 SMYD5Q6GMV2 418 aa8.03□□□□□ -1.12
SCAF8-206ENST00000479234 ATF7IPQ6VMQ6 1270 aa8.03□□□□□ -1.12
SCAF8-206ENST00000479234 FTSJ3Q8IY81 847 aaKnown RBP8.03□□□□□ -1.12
SCAF8-206ENST00000479234 RBM46Q8TBY0 533 aaKnown RBP8.03□□□□□ -1.12
SCAF8-206ENST00000479234 CHMP4BQ9H444 224 aaKnown RBP8.03□□□□□ -1.12
SCAF8-206ENST00000479234 SMC4Q9NTJ3 1288 aa8.03□□□□□ -1.12
SCAF8-206ENST00000479234 DDX19BQ9UMR2 479 aa8.03□□□□□ -1.12
SCAF8-206ENST00000479234 DEKP35659 375 aaKnown RBP8.02□□□□□ -1.13
SCAF8-206ENST00000479234 MLLT3P42568 568 aaPredicted RBP8.02□□□□□ -1.13
SCAF8-206ENST00000479234 LMOD3Q0VAK6 560 aa8.02□□□□□ -1.13
SCAF8-206ENST00000479234 LIAT1Q6ZQX7 453 aa8.02□□□□□ -1.13
SCAF8-206ENST00000479234 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.02□□□□□ -1.13
SCAF8-206ENST00000479234 SSH1Q8WYL5 1049 aa8.02□□□□□ -1.13
SCAF8-206ENST00000479234 KIF16BQ96L93 1317 aa8.02□□□□□ -1.13
SCAF8-206ENST00000479234 METP08581 1390 aa8.01□□□□□ -1.13
SCAF8-206ENST00000479234 CFHP08603 1231 aa8.01□□□□□ -1.13
SCAF8-206ENST00000479234 PRKAR2BP31323 418 aa8.01□□□□□ -1.13
SCAF8-206ENST00000479234 GNAI1P63096 354 aa8.01□□□□□ -1.13
SCAF8-206ENST00000479234 LMOD2Q6P5Q4 547 aa8.01□□□□□ -1.13
SCAF8-206ENST00000479234 TXNDC2Q86VQ3 553 aa8.01□□□□□ -1.13
SCAF8-206ENST00000479234 ARHGAP45Q92619 1136 aa8.01□□□□□ -1.13
SCAF8-206ENST00000479234 TSR2Q969E8 191 aaKnown RBP8.01□□□□□ -1.13
SCAF8-206ENST00000479234 COG3Q96JB2 828 aa8.01□□□□□ -1.13
SCAF8-206ENST00000479234 BCL2L13Q9BXK5 485 aa8.01□□□□□ -1.13
SCAF8-206ENST00000479234 NOB1Q9ULX3 412 aaKnown RBP8.01□□□□□ -1.13
SCAF8-206ENST00000479234 TNNQ9UQP3 1299 aa8.01□□□□□ -1.13
SCAF8-206ENST00000479234 PPIP5K1Q6PFW1 1433 aa8.01□□□□□ -1.13
SCAF8-206ENST00000479234 SETD1AO15047 1707 aaKnown RBP8□□□□□ -1.13
SCAF8-206ENST00000479234 TMEM2Q9UHN6 1383 aa8□□□□□ -1.13
SCAF8-206ENST00000479234 PLEKHG3A1L390 1219 aa8□□□□□ -1.13
SCAF8-206ENST00000479234 NR1I2O75469 434 aa8□□□□□ -1.13
SCAF8-206ENST00000479234 ZNF853P0CG23 659 aa8□□□□□ -1.13
SCAF8-206ENST00000479234 TRIM27P14373 513 aa8□□□□□ -1.13
SCAF8-206ENST00000479234 PTGDRQ13258 359 aa8□□□□□ -1.13
SCAF8-206ENST00000479234 IFT57Q9NWB7 429 aa8□□□□□ -1.13
SCAF8-206ENST00000479234 ADGRG1Q9Y653 693 aa8□□□□□ -1.13
SCAF8-206ENST00000479234 POTECB2RU33 542 aa7.99□□□□□ -1.13
SCAF8-206ENST00000479234 TNFRSF10AO00220 468 aa7.99□□□□□ -1.13
SCAF8-206ENST00000479234 PPEF1O14829 653 aaPredicted RBP7.99□□□□□ -1.13
SCAF8-206ENST00000479234 VAMP4O75379 141 aa7.99□□□□□ -1.13
SCAF8-206ENST00000479234 TSPOAP1O95153 1857 aa7.99□□□□□ -1.13
SCAF8-206ENST00000479234 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.99□□□□□ -1.13
SCAF8-206ENST00000479234 NME9Q86XW9 330 aa7.99□□□□□ -1.13
SCAF8-206ENST00000479234 SMC5Q8IY18 1101 aa7.99□□□□□ -1.13
SCAF8-206ENST00000479234 UPF2Q9HAU5 1272 aaKnown RBP7.99□□□□□ -1.13
SCAF8-206ENST00000479234 ZBTB40Q9NUA8 1239 aa7.99□□□□□ -1.13
SCAF8-206ENST00000479234 USP19O94966 1318 aa7.99□□□□□ -1.13
SCAF8-206ENST00000479234 KIF20BQ96Q89 1820 aa7.99□□□□□ -1.13
SCAF8-206ENST00000479234 PLEKHG1Q9ULL1 1385 aa7.98□□□□□ -1.13
SCAF8-206ENST00000479234 BECN1Q14457 450 aa7.98□□□□□ -1.13
SCAF8-206ENST00000479234 SLC6A16Q9GZN6 736 aa7.98□□□□□ -1.13
SCAF8-206ENST00000479234 NRXN3Q9Y4C0 1643 aa7.98□□□□□ -1.13
SCAF8-206ENST00000479234 CDK12Q9NYV4 1490 aaPredicted RBP7.98□□□□□ -1.13
SCAF8-206ENST00000479234 KNDC1Q76NI1 1749 aa7.98□□□□□ -1.13
SCAF8-206ENST00000479234 RCCD1A6NED2 376 aa7.97□□□□□ -1.13
SCAF8-206ENST00000479234 LCE2AQ5TA79 106 aaPredicted RBP7.97□□□□□ -1.13
SCAF8-206ENST00000479234 TREML4Q6UXN2 200 aa7.97□□□□□ -1.13
SCAF8-206ENST00000479234 ITPRIPQ8IWB1 547 aa7.97□□□□□ -1.13
SCAF8-206ENST00000479234 CRIPAKQ8N1N5 446 aa7.97□□□□□ -1.13
SCAF8-206ENST00000479234 TMEM57Q8N5G2 664 aa7.97□□□□□ -1.13
SCAF8-206ENST00000479234 PHACTR3Q96KR7 559 aa7.97□□□□□ -1.13
SCAF8-206ENST00000479234 AAASQ9NRG9 546 aa7.97□□□□□ -1.13
SCAF8-206ENST00000479234 TBX22Q9Y458 520 aa7.97□□□□□ -1.13
SCAF8-206ENST00000479234 LAS1LQ9Y4W2 734 aaKnown RBP7.97□□□□□ -1.13
SCAF8-206ENST00000479234 EID1Q9Y6B2 187 aa7.97□□□□□ -1.13
SCAF8-206ENST00000479234 EMILIN1Q9Y6C2 1016 aa7.97□□□□□ -1.13
SCAF8-206ENST00000479234 CPS1P31327 1500 aa7.97□□□□□ -1.13
SCAF8-206ENST00000479234 TTC21BQ7Z4L5 1316 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms