RNA–Protein interactions for RNA: ENST00000479215.1

ITCH-204, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene ITCH, Length 205 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-204ENST00000479215 PRDM10Q9NQV6 1147 aa12.22□□□□□ -0.45
ITCH-204ENST00000479215 PDE6BP35913 854 aa12.21□□□□□ -0.45
ITCH-204ENST00000479215 NFIXQ14938 502 aa12.21□□□□□ -0.45
ITCH-204ENST00000479215 ERFEQ4G0M1 354 aa12.21□□□□□ -0.45
ITCH-204ENST00000479215 SOS1Q07889 1333 aaPredicted RBP12.2□□□□□ -0.46
ITCH-204ENST00000479215 A0A087WZG4 1122 aa12.2□□□□□ -0.46
ITCH-204ENST00000479215 IQCA1LA6NCM1 817 aa12.2□□□□□ -0.46
ITCH-204ENST00000479215 SOGA3Q5TF21 947 aa12.2□□□□□ -0.46
ITCH-204ENST00000479215 CTCFP49711 727 aaPredicted RBP12.19□□□□□ -0.46
ITCH-204ENST00000479215 AKAP4Q5JQC9 854 aa12.19□□□□□ -0.46
ITCH-204ENST00000479215 DNAJC10Q8IXB1 793 aa12.19□□□□□ -0.46
ITCH-204ENST00000479215 VSIG10Q8N0Z9 540 aa12.19□□□□□ -0.46
ITCH-204ENST00000479215 ZNF622Q969S3 477 aaKnown RBP eCLIP12.19□□□□□ -0.46
ITCH-204ENST00000479215 MKRN1Q9UHC7 482 aaKnown RBP12.19□□□□□ -0.46
ITCH-204ENST00000479215 COL5A3P25940 1745 aaPredicted RBP12.19□□□□□ -0.46
ITCH-204ENST00000479215 ANKRD26Q9UPS8 1709 aa12.18□□□□□ -0.46
ITCH-204ENST00000479215 POTECB2RU33 542 aa12.18□□□□□ -0.46
ITCH-204ENST00000479215 NFKBIEO00221 500 aa12.18□□□□□ -0.46
ITCH-204ENST00000479215 STARD3NLO95772 234 aa12.18□□□□□ -0.46
ITCH-204ENST00000479215 CYP19A1P11511 503 aaPredicted RBP12.18□□□□□ -0.46
ITCH-204ENST00000479215 NPM2Q86SE8 214 aaKnown RBP12.18□□□□□ -0.46
ITCH-204ENST00000479215 BRIP1Q9BX63 1249 aa12.18□□□□□ -0.46
ITCH-204ENST00000479215 SLC52A2Q9HAB3 445 aa12.18□□□□□ -0.46
ITCH-204ENST00000479215 SBF1O95248 1867 aa12.18□□□□□ -0.46
ITCH-204ENST00000479215 COL15A1P39059 1388 aa12.18□□□□□ -0.46
ITCH-204ENST00000479215 LTBP3Q9NS15 1303 aa12.17□□□□□ -0.46
ITCH-204ENST00000479215 SULT6B1Q6IMI4 303 aa12.17□□□□□ -0.46
ITCH-204ENST00000479215 CNKSR1Q969H4 720 aa12.17□□□□□ -0.46
ITCH-204ENST00000479215 TAOK3Q9H2K8 898 aa12.17□□□□□ -0.46
ITCH-204ENST00000479215 MYH14Q7Z406 1995 aaKnown RBP12.17□□□□□ -0.46
ITCH-204ENST00000479215 NPHP1O15259 732 aa12.16□□□□□ -0.46
ITCH-204ENST00000479215 FOXN1O15353 648 aa12.16□□□□□ -0.46
ITCH-204ENST00000479215 C21orf2O43822 256 aa12.16□□□□□ -0.46
ITCH-204ENST00000479215 LDHDQ86WU2 507 aa12.16□□□□□ -0.46
ITCH-204ENST00000479215 TEX13AQ9BXU3 409 aaPredicted RBP12.16□□□□□ -0.46
ITCH-204ENST00000479215 CNTNAP1P78357 1384 aa12.16□□□□□ -0.46
ITCH-204ENST00000479215 PCNTO95613 3336 aa12.15□□□□□ -0.46
ITCH-204ENST00000479215 TMEM88BA6NKF7 163 aa12.15□□□□□ -0.46
ITCH-204ENST00000479215 SLC34A2O95436 690 aa12.15□□□□□ -0.46
ITCH-204ENST00000479215 BICDL1Q6ZP65 573 aa12.15□□□□□ -0.46
ITCH-204ENST00000479215 MORC1Q86VD1 984 aa12.15□□□□□ -0.46
ITCH-204ENST00000479215 POLR3GLQ9BT43 218 aa12.15□□□□□ -0.46
ITCH-204ENST00000479215 TIMELESSQ9UNS1 1208 aa12.15□□□□□ -0.46
ITCH-204ENST00000479215 CANXP27824 592 aaKnown RBP12.14□□□□□ -0.47
ITCH-204ENST00000479215 MAP2K1Q02750 393 aaPredicted RBP12.14□□□□□ -0.47
ITCH-204ENST00000479215 AEBP1Q8IUX7 1158 aa12.14□□□□□ -0.47
ITCH-204ENST00000479215 TTC5Q8N0Z6 440 aa12.14□□□□□ -0.47
ITCH-204ENST00000479215 ZBTB1Q9Y2K1 713 aa12.14□□□□□ -0.47
ITCH-204ENST00000479215 RNMTO43148 476 aaKnown RBP12.13□□□□□ -0.47
ITCH-204ENST00000479215 DDNO94850 711 aaPredicted RBP12.13□□□□□ -0.47
ITCH-204ENST00000479215 L3MBTL3Q96JM7 780 aaPredicted RBP12.13□□□□□ -0.47
ITCH-204ENST00000479215 BCL2L12Q9HB09 334 aa12.13□□□□□ -0.47
ITCH-204ENST00000479215 WBP1LQ9NX94 342 aa12.13□□□□□ -0.47
ITCH-204ENST00000479215 PCDH10Q9P2E7 1040 aa12.13□□□□□ -0.47
ITCH-204ENST00000479215 EIF5P55010 431 aaKnown RBP12.12□□□□□ -0.47
ITCH-204ENST00000479215 ST5P78524 1137 aa12.12□□□□□ -0.47
ITCH-204ENST00000479215 SLC39A6Q13433 755 aa12.12□□□□□ -0.47
ITCH-204ENST00000479215 STYK1Q6J9G0 422 aa12.12□□□□□ -0.47
ITCH-204ENST00000479215 PNMA8AQ86V59 439 aaPredicted RBP12.12□□□□□ -0.47
ITCH-204ENST00000479215 SETDB2Q96T68 719 aa12.12□□□□□ -0.47
ITCH-204ENST00000479215 ZNF219Q9P2Y4 722 aaPredicted RBP12.12□□□□□ -0.47
ITCH-204ENST00000479215 PASKQ96RG2 1323 aa12.11□□□□□ -0.47
ITCH-204ENST00000479215 CARMIL3Q8ND23 1372 aa12.11□□□□□ -0.47
ITCH-204ENST00000479215 VEGFBP49765 207 aa12.11□□□□□ -0.47
ITCH-204ENST00000479215 DEFB115Q30KQ5 88 aa12.11□□□□□ -0.47
ITCH-204ENST00000479215 CNBD1Q8NA66 436 aa12.11□□□□□ -0.47
ITCH-204ENST00000479215 MASTLQ96GX5 879 aa12.11□□□□□ -0.47
ITCH-204ENST00000479215 BEGAINQ9BUH8 593 aa12.11□□□□□ -0.47
ITCH-204ENST00000479215 TAF1DQ9H5J8 278 aaPredicted RBP12.11□□□□□ -0.47
ITCH-204ENST00000479215 LGR6Q9HBX8 967 aa12.11□□□□□ -0.47
ITCH-204ENST00000479215 CLEC11AQ9Y240 323 aa12.11□□□□□ -0.47
ITCH-204ENST00000479215 IL13P35225 146 aa12.1□□□□□ -0.47
ITCH-204ENST00000479215 LBX1P52954 281 aa12.1□□□□□ -0.47
ITCH-204ENST00000479215 EAPPQ56P03 285 aaPredicted RBP12.1□□□□□ -0.47
ITCH-204ENST00000479215 TBC1D9BQ66K14 1250 aa12.1□□□□□ -0.47
ITCH-204ENST00000479215 PRR5LQ6MZQ0 368 aa12.1□□□□□ -0.47
ITCH-204ENST00000479215 PANK3Q9H999 370 aa12.1□□□□□ -0.47
ITCH-204ENST00000479215 HACL1Q9UJ83 578 aa12.1□□□□□ -0.47
ITCH-204ENST00000479215 KNSTRNQ9Y448 316 aa12.1□□□□□ -0.47
ITCH-204ENST00000479215 ITGBL1O95965 494 aaPredicted RBP12.09□□□□□ -0.47
ITCH-204ENST00000479215 POTEIP0CG38 1075 aa12.09□□□□□ -0.47
ITCH-204ENST00000479215 POTEJP0CG39 1038 aa12.09□□□□□ -0.47
ITCH-204ENST00000479215 SRGNP10124 158 aa12.09□□□□□ -0.47
ITCH-204ENST00000479215 IL6STP40189 918 aaPredicted RBP12.09□□□□□ -0.47
ITCH-204ENST00000479215 CCDC93Q567U6 631 aa12.09□□□□□ -0.47
ITCH-204ENST00000479215 PRPF40BQ6NWY9 871 aaKnown RBP12.09□□□□□ -0.47
ITCH-204ENST00000479215 RTKN2Q8IZC4 609 aa12.09□□□□□ -0.47
ITCH-204ENST00000479215 ABHD8Q96I13 439 aa12.09□□□□□ -0.47
ITCH-204ENST00000479215 TJP1Q07157 1748 aa12.08□□□□□ -0.47
ITCH-204ENST00000479215 NRXN2Q9P2S2 1712 aa12.08□□□□□ -0.47
ITCH-204ENST00000479215 RASSF10A6NK89 507 aa12.08□□□□□ -0.48
ITCH-204ENST00000479215 TEFQ10587 303 aa12.08□□□□□ -0.48
ITCH-204ENST00000479215 ZNF330Q9Y3S2 320 aaPredicted RBP12.08□□□□□ -0.48
ITCH-204ENST00000479215 ADAMTS7Q9UKP4 1686 aa12.07□□□□□ -0.48
ITCH-204ENST00000479215 EPHX2P34913 555 aa12.07□□□□□ -0.48
ITCH-204ENST00000479215 ECE1P42892 770 aa12.07□□□□□ -0.48
ITCH-204ENST00000479215 MLLT1Q03111 559 aaPredicted RBP12.07□□□□□ -0.48
ITCH-204ENST00000479215 CLEC4GQ6UXB4 293 aa12.07□□□□□ -0.48
ITCH-204ENST00000479215 TIAM2Q8IVF5 1701 aa12.07□□□□□ -0.48
ITCH-204ENST00000479215 CNTROBQ8N137 903 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms