RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 CD163L1Q9NR16 1453 aa9.14□□□□□ -0.95
USP48-208ENST00000479177 ANKARQ7Z5J8 1434 aa9.14□□□□□ -0.95
USP48-208ENST00000479177 KDM4AO75164 1064 aa9.13□□□□□ -0.95
USP48-208ENST00000479177 NR1I2O75469 434 aa9.13□□□□□ -0.95
USP48-208ENST00000479177 GUCA2AQ02747 115 aa9.13□□□□□ -0.95
USP48-208ENST00000479177 MORN1Q5T089 497 aa9.13□□□□□ -0.95
USP48-208ENST00000479177 BEGAINQ9BUH8 593 aa9.13□□□□□ -0.95
USP48-208ENST00000479177 NCOA3Q9Y6Q9 1424 aa9.13□□□□□ -0.95
USP48-208ENST00000479177 ANKRD36BQ8N2N9 1353 aa9.12□□□□□ -0.95
USP48-208ENST00000479177 AKAP12Q02952 1782 aa9.12□□□□□ -0.95
USP48-208ENST00000479177 PRR36Q9H6K5 1346 aa9.12□□□□□ -0.95
USP48-208ENST00000479177 MON2Q7Z3U7 1717 aa9.12□□□□□ -0.95
USP48-208ENST00000479177 WFS1O76024 890 aa9.12□□□□□ -0.95
USP48-208ENST00000479177 ATP6V1AP38606 617 aa9.12□□□□□ -0.95
USP48-208ENST00000479177 CRIPAKQ8N1N5 446 aa9.12□□□□□ -0.95
USP48-208ENST00000479177 PANK3Q9H999 370 aa9.12□□□□□ -0.95
USP48-208ENST00000479177 TOR4AQ9NXH8 423 aa9.12□□□□□ -0.95
USP48-208ENST00000479177 SLC27A5Q9Y2P5 690 aa9.12□□□□□ -0.95
USP48-208ENST00000479177 DCCP43146 1447 aa9.12□□□□□ -0.95
USP48-208ENST00000479177 PPIP5K1Q6PFW1 1433 aa9.12□□□□□ -0.95
USP48-208ENST00000479177 RGPD8O14715 1765 aaPredicted RBP9.12□□□□□ -0.95
USP48-208ENST00000479177 A0A1W2PP64 1363 aa9.12□□□□□ -0.95
USP48-208ENST00000479177 TMEM94Q12767 1356 aa9.12□□□□□ -0.95
USP48-208ENST00000479177 LRRC7Q96NW7 1537 aa9.11□□□□□ -0.95
USP48-208ENST00000479177 ZNF335Q9H4Z2 1342 aaPredicted RBP9.11□□□□□ -0.95
USP48-208ENST00000479177 NSD3Q9BZ95 1437 aa9.11□□□□□ -0.95
USP48-208ENST00000479177 NRKQ7Z2Y5 1582 aa9.11□□□□□ -0.95
USP48-208ENST00000479177 PER1O15534 1290 aaPredicted RBP9.1□□□□□ -0.95
USP48-208ENST00000479177 AVPP01185 164 aa9.1□□□□□ -0.95
USP48-208ENST00000479177 NFX1Q12986 1120 aaKnown RBP9.1□□□□□ -0.95
USP48-208ENST00000479177 LCE2CQ5TA81 110 aa9.1□□□□□ -0.95
USP48-208ENST00000479177 PROSER2Q86WR7 435 aaPredicted RBP9.1□□□□□ -0.95
USP48-208ENST00000479177 TMC1Q8TDI8 760 aa9.1□□□□□ -0.95
USP48-208ENST00000479177 SPIRE2Q8WWL2 714 aa9.1□□□□□ -0.95
USP48-208ENST00000479177 NUDT16Q96DE0 195 aaKnown RBP9.1□□□□□ -0.95
USP48-208ENST00000479177 SLC12A5Q9H2X9 1139 aa9.1□□□□□ -0.95
USP48-208ENST00000479177 KDM4CQ9H3R0 1056 aa9.1□□□□□ -0.95
USP48-208ENST00000479177 NPC1L1Q9UHC9 1359 aa9.1□□□□□ -0.95
USP48-208ENST00000479177 CPSF1Q10570 1443 aaKnown RBP9.09□□□□□ -0.95
USP48-208ENST00000479177 HOXA2O43364 376 aa9.09□□□□□ -0.95
USP48-208ENST00000479177 ANP32CO43423 234 aa9.09□□□□□ -0.95
USP48-208ENST00000479177 NUTM1Q86Y26 1132 aa9.09□□□□□ -0.95
USP48-208ENST00000479177 SPSB2Q99619 263 aa9.09□□□□□ -0.95
USP48-208ENST00000479177 KIF20BQ96Q89 1820 aa9.09□□□□□ -0.95
USP48-208ENST00000479177 LTBP4Q8N2S1 1624 aa9.09□□□□□ -0.95
USP48-208ENST00000479177 ANKRD26Q9UPS8 1709 aa9.08□□□□□ -0.96
USP48-208ENST00000479177 NDUFV2P19404 249 aa9.08□□□□□ -0.96
USP48-208ENST00000479177 CARD14Q9BXL6 1004 aa9.08□□□□□ -0.96
USP48-208ENST00000479177 CABP1Q9NZU7 370 aa9.08□□□□□ -0.96
USP48-208ENST00000479177 KTN1Q86UP2 1357 aaKnown RBP9.08□□□□□ -0.96
USP48-208ENST00000479177 PARD3Q8TEW0 1356 aa9.08□□□□□ -0.96
USP48-208ENST00000479177 KIF1AQ12756 1690 aa9.07□□□□□ -0.96
USP48-208ENST00000479177 MST1RQ04912 1400 aa9.07□□□□□ -0.96
USP48-208ENST00000479177 EDC4Q6P2E9 1401 aaKnown RBP9.07□□□□□ -0.96
USP48-208ENST00000479177 PLEKHG3A1L390 1219 aa9.07□□□□□ -0.96
USP48-208ENST00000479177 AXIN1O15169 862 aa9.07□□□□□ -0.96
USP48-208ENST00000479177 RNF19BQ6ZMZ0 732 aa9.07□□□□□ -0.96
USP48-208ENST00000479177 C14orf37Q86TY3 774 aa9.07□□□□□ -0.96
USP48-208ENST00000479177 THAP11Q96EK4 314 aa9.07□□□□□ -0.96
USP48-208ENST00000479177 TBC1D2Q9BYX2 928 aa9.07□□□□□ -0.96
USP48-208ENST00000479177 FAM117AQ9C073 453 aa9.07□□□□□ -0.96
USP48-208ENST00000479177 PRKRIP1Q9H875 184 aaPredicted RBP9.07□□□□□ -0.96
USP48-208ENST00000479177 TERF2IPQ9NYB0 399 aa9.07□□□□□ -0.96
USP48-208ENST00000479177 POLR3AO14802 1390 aaPredicted RBP9.07□□□□□ -0.96
USP48-208ENST00000479177 MOXD2PA6NHM9 499 aa9.06□□□□□ -0.96
USP48-208ENST00000479177 NEUROD2Q15784 382 aa9.06□□□□□ -0.96
USP48-208ENST00000479177 HDGFL2Q7Z4V5 671 aaPredicted RBP9.06□□□□□ -0.96
USP48-208ENST00000479177 SYMPKQ92797 1274 aaKnown RBP9.06□□□□□ -0.96
USP48-208ENST00000479177 KNSTRNQ9Y448 316 aa9.06□□□□□ -0.96
USP48-208ENST00000479177 NSD2O96028 1365 aa9.06□□□□□ -0.96
USP48-208ENST00000479177 MSH6P52701 1360 aa9.06□□□□□ -0.96
USP48-208ENST00000479177 C1orf167Q5SNV9 1468 aa9.06□□□□□ -0.96
USP48-208ENST00000479177 USP6P35125 1406 aa9.05□□□□□ -0.96
USP48-208ENST00000479177 RPIAP49247 311 aa9.05□□□□□ -0.96
USP48-208ENST00000479177 BRPF1P55201 1214 aaPredicted RBP9.05□□□□□ -0.96
USP48-208ENST00000479177 USP46P62068 366 aa9.05□□□□□ -0.96
USP48-208ENST00000479177 C19orf44Q9H6X5 657 aa9.05□□□□□ -0.96
USP48-208ENST00000479177 PCDHGC3Q9UN70 934 aa9.05□□□□□ -0.96
USP48-208ENST00000479177 SSH2Q76I76 1423 aa9.05□□□□□ -0.96
USP48-208ENST00000479177 CGNL1Q0VF96 1302 aa9.05□□□□□ -0.96
USP48-208ENST00000479177 RALBP1Q15311 655 aa9.04□□□□□ -0.96
USP48-208ENST00000479177 CYP4X1Q8N118 509 aa9.04□□□□□ -0.96
USP48-208ENST00000479177 STK17AQ9UEE5 414 aa9.04□□□□□ -0.96
USP48-208ENST00000479177 FCF1Q9Y324 198 aaKnown RBP9.04□□□□□ -0.96
USP48-208ENST00000479177 ACEP12821 1306 aa9.04□□□□□ -0.96
USP48-208ENST00000479177 USP54Q70EL1 1684 aa9.04□□□□□ -0.96
USP48-208ENST00000479177 CCER2I3L3R5 266 aa9.03□□□□□ -0.96
USP48-208ENST00000479177 WIPF1O43516 503 aa9.03□□□□□ -0.96
USP48-208ENST00000479177 GRIPAP1Q4V328 841 aa9.03□□□□□ -0.96
USP48-208ENST00000479177 CC2D1BQ5T0F9 858 aaKnown RBP9.03□□□□□ -0.96
USP48-208ENST00000479177 BRICD5Q6PL45 260 aa9.03□□□□□ -0.96
USP48-208ENST00000479177 FAM160A2Q8N612 972 aaPredicted RBP9.03□□□□□ -0.96
USP48-208ENST00000479177 PRDM9Q9NQV7 894 aa9.03□□□□□ -0.96
USP48-208ENST00000479177 PIK3C2AO00443 1686 aa9.03□□□□□ -0.96
USP48-208ENST00000479177 TRPM3Q9HCF6 1732 aaPredicted RBP9.02□□□□□ -0.96
USP48-208ENST00000479177 ATF3P18847 181 aa9.02□□□□□ -0.97
USP48-208ENST00000479177 MYBBP1AQ9BQG0 1328 aaKnown RBP9.02□□□□□ -0.97
USP48-208ENST00000479177 OVOS2A0A0J9YW53 1432 aa9.01□□□□□ -0.97
USP48-208ENST00000479177 CD2BP2O95400 341 aaKnown RBP9.01□□□□□ -0.97
USP48-208ENST00000479177 FDX1P10109 184 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms