RNA–Protein interactions for RNA: ENST00000478911.1

SUPT20H-215, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-215ENST00000478911 ZNF594Q96JF6 807 aaPredicted RBP6.13□□□□□ -1.43
SUPT20H-215ENST00000478911 PCDHGA11Q9Y5H2 935 aa6.13□□□□□ -1.43
SUPT20H-215ENST00000478911 ZBTB7BO15156 539 aaPredicted RBP6.12□□□□□ -1.43
SUPT20H-215ENST00000478911 DKK1O94907 266 aa6.12□□□□□ -1.43
SUPT20H-215ENST00000478911 DPYDQ12882 1025 aa6.12□□□□□ -1.43
SUPT20H-215ENST00000478911 DBN1Q16643 649 aa6.12□□□□□ -1.43
SUPT20H-215ENST00000478911 SIX5Q8N196 739 aa6.12□□□□□ -1.43
SUPT20H-215ENST00000478911 FAM200AQ8TCP9 573 aa6.12□□□□□ -1.43
SUPT20H-215ENST00000478911 GTPBP3Q969Y2 492 aaKnown RBP6.12□□□□□ -1.43
SUPT20H-215ENST00000478911 TRERF1Q96PN7 1200 aa6.12□□□□□ -1.43
SUPT20H-215ENST00000478911 MYCP01106 439 aaPredicted RBP6.11□□□□□ -1.43
SUPT20H-215ENST00000478911 RNF144AP50876 292 aaPredicted RBP6.11□□□□□ -1.43
SUPT20H-215ENST00000478911 ERVK-9P63128 1117 aa6.11□□□□□ -1.43
SUPT20H-215ENST00000478911 FAM69CQ0P6D2 419 aa6.11□□□□□ -1.43
SUPT20H-215ENST00000478911 PSMG3-AS1Q96PY0 264 aa6.11□□□□□ -1.43
SUPT20H-215ENST00000478911 LRRC4BQ9NT99 713 aa6.11□□□□□ -1.43
SUPT20H-215ENST00000478911 NSFL1CQ9UNZ2 370 aaKnown RBP6.11□□□□□ -1.43
SUPT20H-215ENST00000478911 ZBTB7CA1YPR0 619 aa6.1□□□□□ -1.43
SUPT20H-215ENST00000478911 KRBA1A5PL33 1030 aa6.1□□□□□ -1.43
SUPT20H-215ENST00000478911 H7C1W4 665 aa6.1□□□□□ -1.43
SUPT20H-215ENST00000478911 OIP5O43482 229 aa6.1□□□□□ -1.43
SUPT20H-215ENST00000478911 BRD1O95696 1058 aa6.1□□□□□ -1.43
SUPT20H-215ENST00000478911 MX2P20592 715 aa6.1□□□□□ -1.43
SUPT20H-215ENST00000478911 CCDC102BQ68D86 513 aa6.1□□□□□ -1.43
SUPT20H-215ENST00000478911 CC2D2BQ6DHV5 1058 aa6.1□□□□□ -1.43
SUPT20H-215ENST00000478911 AEBP1Q8IUX7 1158 aa6.1□□□□□ -1.43
SUPT20H-215ENST00000478911 TPCN2Q8NHX9 752 aa6.1□□□□□ -1.43
SUPT20H-215ENST00000478911 CYLDQ9NQC7 956 aa6.1□□□□□ -1.43
SUPT20H-215ENST00000478911 FURINP09958 794 aa6.09□□□□□ -1.43
SUPT20H-215ENST00000478911 SNRPNP63162 240 aaKnown RBP6.09□□□□□ -1.43
SUPT20H-215ENST00000478911 PSME1Q06323 249 aa6.09□□□□□ -1.43
SUPT20H-215ENST00000478911 SWI5Q1ZZU3 235 aa6.09□□□□□ -1.43
SUPT20H-215ENST00000478911 CLP1Q92989 425 aaKnown RBP6.09□□□□□ -1.43
SUPT20H-215ENST00000478911 GAS2L1Q99501 681 aaPredicted RBP6.09□□□□□ -1.43
SUPT20H-215ENST00000478911 OSBPL3Q9H4L5 887 aa6.09□□□□□ -1.43
SUPT20H-215ENST00000478911 SLAIN2Q9P270 581 aa6.09□□□□□ -1.43
SUPT20H-215ENST00000478911 SFI1A8K8P3 1242 aa6.08□□□□□ -1.44
SUPT20H-215ENST00000478911 SEC13P55735 322 aa6.08□□□□□ -1.44
SUPT20H-215ENST00000478911 KCNA1Q09470 495 aa6.08□□□□□ -1.44
SUPT20H-215ENST00000478911 TRIM52Q96A61 297 aa6.08□□□□□ -1.44
SUPT20H-215ENST00000478911 PODXL2Q9NZ53 605 aa6.08□□□□□ -1.44
SUPT20H-215ENST00000478911 MKL2Q9ULH7 1088 aa6.08□□□□□ -1.44
SUPT20H-215ENST00000478911 DYRK1BQ9Y463 629 aa6.08□□□□□ -1.44
SUPT20H-215ENST00000478911 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.07□□□□□ -1.44
SUPT20H-215ENST00000478911 MEN1O00255 615 aa6.07□□□□□ -1.44
SUPT20H-215ENST00000478911 GPC1P35052 558 aa6.07□□□□□ -1.44
SUPT20H-215ENST00000478911 B4GALNT3Q6L9W6 998 aa6.07□□□□□ -1.44
SUPT20H-215ENST00000478911 ALYREFQ86V81 257 aaKnown RBP6.07□□□□□ -1.44
SUPT20H-215ENST00000478911 OXCT2Q9BYC2 517 aaPredicted RBP6.07□□□□□ -1.44
SUPT20H-215ENST00000478911 KRTAP9-2Q9BYQ4 174 aa6.07□□□□□ -1.44
SUPT20H-215ENST00000478911 RBM19Q9Y4C8 960 aaKnown RBP6.07□□□□□ -1.44
SUPT20H-215ENST00000478911 TMEM229AB2RXF0 380 aa6.06□□□□□ -1.44
SUPT20H-215ENST00000478911 PATL2C9JE40 543 aaKnown RBP6.06□□□□□ -1.44
SUPT20H-215ENST00000478911 MAP2K3P46734 347 aa6.06□□□□□ -1.44
SUPT20H-215ENST00000478911 SCNN1DP51172 638 aa6.06□□□□□ -1.44
SUPT20H-215ENST00000478911 PHLDB3Q6NSJ2 640 aa6.06□□□□□ -1.44
SUPT20H-215ENST00000478911 ESF1Q9H501 851 aaKnown RBP6.06□□□□□ -1.44
SUPT20H-215ENST00000478911 M0R2N6 131 aa6.05□□□□□ -1.44
SUPT20H-215ENST00000478911 WASLO00401 505 aaPredicted RBP6.05□□□□□ -1.44
SUPT20H-215ENST00000478911 STAU1O95793 577 aaKnown RBP6.05□□□□□ -1.44
SUPT20H-215ENST00000478911 COL8A1P27658 744 aa6.05□□□□□ -1.44
SUPT20H-215ENST00000478911 SSFA2P28290 1259 aa6.05□□□□□ -1.44
SUPT20H-215ENST00000478911 POU4F2Q12837 409 aa6.05□□□□□ -1.44
SUPT20H-215ENST00000478911 SLC27A3Q5K4L6 730 aa6.05□□□□□ -1.44
SUPT20H-215ENST00000478911 CYP2U1Q7Z449 544 aa6.05□□□□□ -1.44
SUPT20H-215ENST00000478911 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.05□□□□□ -1.44
SUPT20H-215ENST00000478911 RRAGCQ9HB90 399 aa6.05□□□□□ -1.44
SUPT20H-215ENST00000478911 ZNF358Q9NW07 568 aa6.05□□□□□ -1.44
SUPT20H-215ENST00000478911 SHISA8B8ZZ34 492 aa6.04□□□□□ -1.44
SUPT20H-215ENST00000478911 ATP2B4P23634 1241 aa6.04□□□□□ -1.44
SUPT20H-215ENST00000478911 GDF10P55107 478 aa6.04□□□□□ -1.44
SUPT20H-215ENST00000478911 OCLNQ16625 522 aa6.04□□□□□ -1.44
SUPT20H-215ENST00000478911 TSEN2Q8NCE0 465 aaKnown RBP6.04□□□□□ -1.44
SUPT20H-215ENST00000478911 NUCKS1Q9H1E3 243 aaKnown RBP6.04□□□□□ -1.44
SUPT20H-215ENST00000478911 ETNK1Q9HBU6 452 aa6.04□□□□□ -1.44
SUPT20H-215ENST00000478911 KRTAP9-6A0A140TA67 174 aa6.03□□□□□ -1.44
SUPT20H-215ENST00000478911 A0A1W2PRU2 124 aa6.03□□□□□ -1.44
SUPT20H-215ENST00000478911 PRMT3O60678 531 aa6.03□□□□□ -1.44
SUPT20H-215ENST00000478911 GNRH1P01148 92 aa6.03□□□□□ -1.44
SUPT20H-215ENST00000478911 INHAP05111 366 aa6.03□□□□□ -1.44
SUPT20H-215ENST00000478911 GRIN2CQ14957 1233 aa6.03□□□□□ -1.44
SUPT20H-215ENST00000478911 NBPF10Q6P3W6 841 aaKnown RBP6.03□□□□□ -1.44
SUPT20H-215ENST00000478911 NBPF15Q8N660 670 aa6.03□□□□□ -1.44
SUPT20H-215ENST00000478911 NLRP3Q96P20 1036 aa6.03□□□□□ -1.44
SUPT20H-215ENST00000478911 IVNS1ABPQ9Y6Y0 642 aa6.03□□□□□ -1.44
SUPT20H-215ENST00000478911 LGR5O75473 907 aa6.02□□□□□ -1.45
SUPT20H-215ENST00000478911 C1orf216Q8TAB5 229 aa6.02□□□□□ -1.45
SUPT20H-215ENST00000478911 PRIMPOLQ96LW4 560 aa6.02□□□□□ -1.45
SUPT20H-215ENST00000478911 HINFPQ9BQA5 517 aa6.02□□□□□ -1.45
SUPT20H-215ENST00000478911 ARHGEF10LQ9HCE6 1279 aa6.02□□□□□ -1.45
SUPT20H-215ENST00000478911 TIMMDC1Q9NPL8 285 aa6.02□□□□□ -1.45
SUPT20H-215ENST00000478911 RAB6BQ9NRW1 208 aa6.02□□□□□ -1.45
SUPT20H-215ENST00000478911 CXXC1Q9P0U4 656 aaPredicted RBP6.02□□□□□ -1.45
SUPT20H-215ENST00000478911 GNEQ9Y223 722 aaKnown RBP6.02□□□□□ -1.45
SUPT20H-215ENST00000478911 BACH1O14867 736 aa6.01□□□□□ -1.45
SUPT20H-215ENST00000478911 F11P03951 625 aa6.01□□□□□ -1.45
SUPT20H-215ENST00000478911 WEE1P30291 646 aa6.01□□□□□ -1.45
SUPT20H-215ENST00000478911 EPHA4P54764 986 aa6.01□□□□□ -1.45
SUPT20H-215ENST00000478911 C1orf229Q6ZS94 237 aaPredicted RBP6.01□□□□□ -1.45
SUPT20H-215ENST00000478911 TXNDC2Q86VQ3 553 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms