RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 USPL1Q5W0Q7 1092 aa17.42■□□□□ 0.38
TDP2-204ENST00000478507 RBM46Q8TBY0 533 aaKnown RBP17.42■□□□□ 0.38
TDP2-204ENST00000478507 TNRC6CQ9HCJ0 1690 aaKnown RBP17.42■□□□□ 0.38
TDP2-204ENST00000478507 PCNTO95613 3336 aa17.41■□□□□ 0.38
TDP2-204ENST00000478507 SLC39A6Q13433 755 aa17.41■□□□□ 0.38
TDP2-204ENST00000478507 BCL2L12Q9HB09 334 aa17.41■□□□□ 0.38
TDP2-204ENST00000478507 COL15A1P39059 1388 aa17.4■□□□□ 0.38
TDP2-204ENST00000478507 PER1O15534 1290 aaPredicted RBP17.4■□□□□ 0.38
TDP2-204ENST00000478507 ZPR1O75312 459 aa17.4■□□□□ 0.38
TDP2-204ENST00000478507 NFIXQ14938 502 aa17.4■□□□□ 0.38
TDP2-204ENST00000478507 MTHFSDQ2M296 383 aaKnown RBP17.4■□□□□ 0.38
TDP2-204ENST00000478507 NARFQ9UHQ1 456 aa17.4■□□□□ 0.38
TDP2-204ENST00000478507 ZBTB1Q9Y2K1 713 aa17.4■□□□□ 0.38
TDP2-204ENST00000478507 KIF7Q2M1P5 1343 aa17.4■□□□□ 0.38
TDP2-204ENST00000478507 HMOX1P09601 288 aa17.39■□□□□ 0.37
TDP2-204ENST00000478507 VSIG10Q8N0Z9 540 aa17.39■□□□□ 0.37
TDP2-204ENST00000478507 RNF181Q9P0P0 153 aa17.39■□□□□ 0.37
TDP2-204ENST00000478507 COL3A1P02461 1466 aaPredicted RBP17.38■□□□□ 0.37
TDP2-204ENST00000478507 KDM2BQ8NHM5 1336 aa17.38■□□□□ 0.37
TDP2-204ENST00000478507 PRELPP51888 382 aa17.37■□□□□ 0.37
TDP2-204ENST00000478507 FSTL1Q12841 308 aa17.37■□□□□ 0.37
TDP2-204ENST00000478507 ZC3H4Q9UPT8 1303 aaKnown RBP17.37■□□□□ 0.37
TDP2-204ENST00000478507 SIPA1L3O60292 1781 aaPredicted RBP17.37■□□□□ 0.37
TDP2-204ENST00000478507 CARMIL3Q8ND23 1372 aa17.36■□□□□ 0.37
TDP2-204ENST00000478507 ANKRD31Q8N7Z5 1873 aa17.35■□□□□ 0.37
TDP2-204ENST00000478507 RASSF7Q02833 373 aa17.35■□□□□ 0.37
TDP2-204ENST00000478507 SCN7AQ01118 1682 aa17.35■□□□□ 0.37
TDP2-204ENST00000478507 DIAPH1O60610 1272 aaKnown RBP17.34■□□□□ 0.37
TDP2-204ENST00000478507 SERPINB2P05120 415 aa17.34■□□□□ 0.37
TDP2-204ENST00000478507 EIF5P55010 431 aaKnown RBP17.34■□□□□ 0.37
TDP2-204ENST00000478507 HTRA3P83110 453 aa17.34■□□□□ 0.37
TDP2-204ENST00000478507 JMYQ8N9B5 988 aa17.34■□□□□ 0.37
TDP2-204ENST00000478507 RRAGCQ9HB90 399 aa17.34■□□□□ 0.37
TDP2-204ENST00000478507 CCDC88AQ3V6T2 1871 aa17.33■□□□□ 0.37
TDP2-204ENST00000478507 TIAM2Q8IVF5 1701 aa17.33■□□□□ 0.37
TDP2-204ENST00000478507 C16orf71Q8IYS4 520 aaPredicted RBP17.33■□□□□ 0.36
TDP2-204ENST00000478507 NPC1L1Q9UHC9 1359 aa17.32■□□□□ 0.36
TDP2-204ENST00000478507 KLRG1Q96E93 195 aa17.32■□□□□ 0.36
TDP2-204ENST00000478507 COL11A2P13942 1736 aaPredicted RBP17.31■□□□□ 0.36
TDP2-204ENST00000478507 NFKBIEO00221 500 aa17.31■□□□□ 0.36
TDP2-204ENST00000478507 LMNB1P20700 586 aa17.31■□□□□ 0.36
TDP2-204ENST00000478507 CANXP27824 592 aaKnown RBP17.31■□□□□ 0.36
TDP2-204ENST00000478507 TTLL6Q8N841 843 aa17.31■□□□□ 0.36
TDP2-204ENST00000478507 IL17REQ8NFR9 667 aa17.31■□□□□ 0.36
TDP2-204ENST00000478507 ZNF496Q96IT1 587 aaPredicted RBP17.31■□□□□ 0.36
TDP2-204ENST00000478507 HEG1Q9ULI3 1381 aa17.3■□□□□ 0.36
TDP2-204ENST00000478507 GLTPD2A6NH11 291 aa17.3■□□□□ 0.36
TDP2-204ENST00000478507 CC2D1BQ5T0F9 858 aaKnown RBP17.3■□□□□ 0.36
TDP2-204ENST00000478507 CCER1Q8TC90 406 aaPredicted RBP17.3■□□□□ 0.36
TDP2-204ENST00000478507 FER1L6Q2WGJ9 1857 aa17.29■□□□□ 0.36
TDP2-204ENST00000478507 STARD3NLO95772 234 aa17.29■□□□□ 0.36
TDP2-204ENST00000478507 ZNF790Q6PG37 636 aa17.29■□□□□ 0.36
TDP2-204ENST00000478507 C2CD5Q86YS7 1000 aa17.29■□□□□ 0.36
TDP2-204ENST00000478507 SMC1BQ8NDV3 1235 aa17.29■□□□□ 0.36
TDP2-204ENST00000478507 DICER1Q9UPY3 1922 aaKnown RBP17.29■□□□□ 0.36
TDP2-204ENST00000478507 CEMIPQ8WUJ3 1361 aa17.28■□□□□ 0.36
TDP2-204ENST00000478507 TBC1D9BQ66K14 1250 aa17.28■□□□□ 0.36
TDP2-204ENST00000478507 TTC5Q8N0Z6 440 aa17.28■□□□□ 0.36
TDP2-204ENST00000478507 A0A087WZG4 1122 aa17.27■□□□□ 0.36
TDP2-204ENST00000478507 H0YIN7 160 aa17.27■□□□□ 0.36
TDP2-204ENST00000478507 BCORQ6W2J9 1755 aa17.27■□□□□ 0.35
TDP2-204ENST00000478507 GNAT3A8MTJ3 354 aa17.26■□□□□ 0.35
TDP2-204ENST00000478507 POTECB2RU33 542 aa17.26■□□□□ 0.35
TDP2-204ENST00000478507 VEGFAP15692 232 aaPredicted RBP17.26■□□□□ 0.35
TDP2-204ENST00000478507 IL6STP40189 918 aaPredicted RBP17.26■□□□□ 0.35
TDP2-204ENST00000478507 BICDL1Q6ZP65 573 aa17.26■□□□□ 0.35
TDP2-204ENST00000478507 GAS2L2Q8NHY3 880 aa17.26■□□□□ 0.35
TDP2-204ENST00000478507 BRIP1Q9BX63 1249 aa17.26■□□□□ 0.35
TDP2-204ENST00000478507 PRR5LQ6MZQ0 368 aa17.25■□□□□ 0.35
TDP2-204ENST00000478507 TEX13AQ9BXU3 409 aaPredicted RBP17.25■□□□□ 0.35
TDP2-204ENST00000478507 TEFQ10587 303 aa17.24■□□□□ 0.35
TDP2-204ENST00000478507 PDZRN3Q9UPQ7 1066 aa17.24■□□□□ 0.35
TDP2-204ENST00000478507 TBC1D2BQ9UPU7 963 aa17.24■□□□□ 0.35
TDP2-204ENST00000478507 ARFGEF2Q9Y6D5 1785 aa17.24■□□□□ 0.35
TDP2-204ENST00000478507 SLX4Q8IY92 1834 aa17.24■□□□□ 0.35
TDP2-204ENST00000478507 U2SURPO15042 1029 aaKnown RBP17.23■□□□□ 0.35
TDP2-204ENST00000478507 CAMTA2O94983 1202 aa17.23■□□□□ 0.35
TDP2-204ENST00000478507 LTBP3Q9NS15 1303 aa17.22■□□□□ 0.35
TDP2-204ENST00000478507 KCNQ3O43525 872 aa17.22■□□□□ 0.35
TDP2-204ENST00000478507 A1BGP04217 495 aa17.22■□□□□ 0.35
TDP2-204ENST00000478507 PDE6BP35913 854 aa17.22■□□□□ 0.35
TDP2-204ENST00000478507 COL13A1Q5TAT6 717 aaPredicted RBP17.22■□□□□ 0.35
TDP2-204ENST00000478507 CCDC24Q8N4L8 307 aa17.22■□□□□ 0.35
TDP2-204ENST00000478507 PHACTR3Q96KR7 559 aa17.22■□□□□ 0.35
TDP2-204ENST00000478507 FMNL2Q96PY5 1086 aa17.22■□□□□ 0.35
TDP2-204ENST00000478507 CACNA1SQ13698 1873 aa17.21■□□□□ 0.35
TDP2-204ENST00000478507 C21orf2O43822 256 aa17.21■□□□□ 0.35
TDP2-204ENST00000478507 RSPH6AQ9H0K4 717 aa17.21■□□□□ 0.35
TDP2-204ENST00000478507 ZNF622Q969S3 477 aaKnown RBP eCLIP17.2■□□□□ 0.34
TDP2-204ENST00000478507 SRGNP10124 158 aa17.19■□□□□ 0.34
TDP2-204ENST00000478507 PRKAR2BP31323 418 aa17.19■□□□□ 0.34
TDP2-204ENST00000478507 CNBD1Q8NA66 436 aa17.19■□□□□ 0.34
TDP2-204ENST00000478507 ZNF330Q9Y3S2 320 aaPredicted RBP17.19■□□□□ 0.34
TDP2-204ENST00000478507 BTBD11A6QL63 1104 aa17.18■□□□□ 0.34
TDP2-204ENST00000478507 ERFEQ4G0M1 354 aa17.18■□□□□ 0.34
TDP2-204ENST00000478507 STYK1Q6J9G0 422 aa17.18■□□□□ 0.34
TDP2-204ENST00000478507 SETDB2Q96T68 719 aa17.18■□□□□ 0.34
TDP2-204ENST00000478507 USP16Q9Y5T5 823 aa17.18■□□□□ 0.34
TDP2-204ENST00000478507 PRAMEF22A3QJZ6 481 aa17.17■□□□□ 0.34
TDP2-204ENST00000478507 DPY19L2Q6NUT2 758 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms