RNA–Protein interactions for RNA: ENST00000478462.5

MSL3-214, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-214ENST00000478462 SALL2Q9Y467 1007 aaPredicted RBP9.97□□□□□ -0.81
MSL3-214ENST00000478462 CEMIPQ8WUJ3 1361 aa9.97□□□□□ -0.81
MSL3-214ENST00000478462 LY75O60449 1722 aa9.96□□□□□ -0.81
MSL3-214ENST00000478462 RGPD3A6NKT7 1758 aaPredicted RBP9.96□□□□□ -0.81
MSL3-214ENST00000478462 RGPD4Q7Z3J3 1758 aa9.96□□□□□ -0.81
MSL3-214ENST00000478462 BTBD11A6QL63 1104 aa9.96□□□□□ -0.82
MSL3-214ENST00000478462 TXNRD1Q16881 649 aa9.96□□□□□ -0.82
MSL3-214ENST00000478462 TTC5Q8N0Z6 440 aa9.96□□□□□ -0.82
MSL3-214ENST00000478462 SPRYD3Q8NCJ5 442 aa9.96□□□□□ -0.82
MSL3-214ENST00000478462 CAMKK2Q96RR4 588 aa9.96□□□□□ -0.82
MSL3-214ENST00000478462 ATG3Q9NT62 314 aa9.96□□□□□ -0.82
MSL3-214ENST00000478462 TRIM35Q9UPQ4 493 aa9.96□□□□□ -0.82
MSL3-214ENST00000478462 PALLDQ8WX93 1383 aa9.96□□□□□ -0.82
MSL3-214ENST00000478462 PTCD1O75127 700 aaKnown RBP9.95□□□□□ -0.82
MSL3-214ENST00000478462 CALD1Q05682 793 aaKnown RBP9.95□□□□□ -0.82
MSL3-214ENST00000478462 SLC39A6Q13433 755 aa9.95□□□□□ -0.82
MSL3-214ENST00000478462 MIS18AQ9NYP9 233 aa9.95□□□□□ -0.82
MSL3-214ENST00000478462 CCNL1Q9UK58 526 aaPredicted RBP9.95□□□□□ -0.82
MSL3-214ENST00000478462 LAS1LQ9Y4W2 734 aaKnown RBP9.95□□□□□ -0.82
MSL3-214ENST00000478462 MRC1P22897 1456 aa9.95□□□□□ -0.82
MSL3-214ENST00000478462 LOC102724428A0A0B4J2F2 783 aa9.94□□□□□ -0.82
MSL3-214ENST00000478462 HMGB2P26583 209 aaKnown RBP9.94□□□□□ -0.82
MSL3-214ENST00000478462 ATP6V1AP38606 617 aa9.94□□□□□ -0.82
MSL3-214ENST00000478462 SIK1P57059 783 aa9.94□□□□□ -0.82
MSL3-214ENST00000478462 CCDC27Q2M243 656 aa9.94□□□□□ -0.82
MSL3-214ENST00000478462 SLC27A3Q5K4L6 730 aa9.94□□□□□ -0.82
MSL3-214ENST00000478462 ZNF790Q6PG37 636 aa9.94□□□□□ -0.82
MSL3-214ENST00000478462 NGEFQ8N5V2 710 aa9.94□□□□□ -0.82
MSL3-214ENST00000478462 TAF1LQ8IZX4 1826 aa9.93□□□□□ -0.82
MSL3-214ENST00000478462 KCNQ4P56696 695 aa9.93□□□□□ -0.82
MSL3-214ENST00000478462 NBPF14Q5TI25 921 aa9.93□□□□□ -0.82
MSL3-214ENST00000478462 WWC1Q8IX03 1113 aa9.93□□□□□ -0.82
MSL3-214ENST00000478462 TSPYL4Q9UJ04 414 aa9.93□□□□□ -0.82
MSL3-214ENST00000478462 KCNQ3O43525 872 aa9.92□□□□□ -0.82
MSL3-214ENST00000478462 FMNL2Q96PY5 1086 aa9.92□□□□□ -0.82
MSL3-214ENST00000478462 BABAM1Q9NWV8 329 aa9.92□□□□□ -0.82
MSL3-214ENST00000478462 UBR2Q8IWV8 1755 aa9.92□□□□□ -0.82
MSL3-214ENST00000478462 RREB1Q92766 1687 aa9.92□□□□□ -0.82
MSL3-214ENST00000478462 PAPPAQ13219 1627 aa9.92□□□□□ -0.82
MSL3-214ENST00000478462 KDM3BQ7LBC6 1761 aa9.91□□□□□ -0.82
MSL3-214ENST00000478462 NUP188Q5SRE5 1749 aa9.91□□□□□ -0.82
MSL3-214ENST00000478462 C5P01031 1676 aa9.91□□□□□ -0.82
MSL3-214ENST00000478462 GALR2O43603 387 aaPredicted RBP9.91□□□□□ -0.82
MSL3-214ENST00000478462 CHRM1P11229 460 aaPredicted RBP9.91□□□□□ -0.82
MSL3-214ENST00000478462 GNAI1P63096 354 aa9.91□□□□□ -0.82
MSL3-214ENST00000478462 HS6ST3Q8IZP7 471 aa9.91□□□□□ -0.82
MSL3-214ENST00000478462 ZNF496Q96IT1 587 aaPredicted RBP9.91□□□□□ -0.82
MSL3-214ENST00000478462 LRRC4BQ9NT99 713 aa9.91□□□□□ -0.82
MSL3-214ENST00000478462 CHL1O00533 1208 aa9.9□□□□□ -0.82
MSL3-214ENST00000478462 HNRNPUQ00839 825 aaKnown RBP eCLIP9.9□□□□□ -0.82
MSL3-214ENST00000478462 WDR63Q8IWG1 891 aa9.9□□□□□ -0.82
MSL3-214ENST00000478462 RNF25Q96BH1 459 aaPredicted RBP9.9□□□□□ -0.82
MSL3-214ENST00000478462 IFT57Q9NWB7 429 aa9.9□□□□□ -0.82
MSL3-214ENST00000478462 STK32BQ9NY57 414 aa9.9□□□□□ -0.82
MSL3-214ENST00000478462 MYH14Q7Z406 1995 aaKnown RBP9.9□□□□□ -0.83
MSL3-214ENST00000478462 ZNF831Q5JPB2 1677 aa9.9□□□□□ -0.83
MSL3-214ENST00000478462 KCPQ6ZWJ8 1503 aa9.89□□□□□ -0.83
MSL3-214ENST00000478462 STARD3NLO95772 234 aa9.89□□□□□ -0.83
MSL3-214ENST00000478462 SNRPA1P09661 255 aaKnown RBP9.89□□□□□ -0.83
MSL3-214ENST00000478462 ITPK1Q13572 414 aa9.89□□□□□ -0.83
MSL3-214ENST00000478462 DNAJC10Q8IXB1 793 aa9.89□□□□□ -0.83
MSL3-214ENST00000478462 SLC4A9Q96Q91 983 aa9.89□□□□□ -0.83
MSL3-214ENST00000478462 TEX13AQ9BXU3 409 aaPredicted RBP9.89□□□□□ -0.83
MSL3-214ENST00000478462 HEG1Q9ULI3 1381 aa9.88□□□□□ -0.83
MSL3-214ENST00000478462 IL16Q14005 1332 aa9.88□□□□□ -0.83
MSL3-214ENST00000478462 COL5A3P25940 1745 aaPredicted RBP9.88□□□□□ -0.83
MSL3-214ENST00000478462 ZNF853P0CG23 659 aa9.88□□□□□ -0.83
MSL3-214ENST00000478462 EIF4A1P60842 406 aaKnown RBP9.88□□□□□ -0.83
MSL3-214ENST00000478462 LINC00116Q8NCU8 138 aa9.88□□□□□ -0.83
MSL3-214ENST00000478462 OTUD5Q96G74 571 aa9.88□□□□□ -0.83
MSL3-214ENST00000478462 AK7Q96M32 723 aa9.88□□□□□ -0.83
MSL3-214ENST00000478462 MBIPQ9NS73 344 aa9.88□□□□□ -0.83
MSL3-214ENST00000478462 TFCP2L1Q9NZI6 479 aa9.88□□□□□ -0.83
MSL3-214ENST00000478462 C4BP0C0L5 1744 aa9.87□□□□□ -0.83
MSL3-214ENST00000478462 TJP1Q07157 1748 aa9.87□□□□□ -0.83
MSL3-214ENST00000478462 RIOK3O14730 519 aaKnown RBP9.87□□□□□ -0.83
MSL3-214ENST00000478462 GOLGA2Q08379 1002 aa9.87□□□□□ -0.83
MSL3-214ENST00000478462 SLC15A2Q16348 729 aa9.87□□□□□ -0.83
MSL3-214ENST00000478462 PHF12Q96QT6 1004 aa9.87□□□□□ -0.83
MSL3-214ENST00000478462 TSHZ2Q9NRE2 1034 aa9.87□□□□□ -0.83
MSL3-214ENST00000478462 TAOK2Q9UL54 1235 aa9.87□□□□□ -0.83
MSL3-214ENST00000478462 GNPATO15228 680 aa9.86□□□□□ -0.83
MSL3-214ENST00000478462 GIGYF1O75420 1035 aaPredicted RBP9.86□□□□□ -0.83
MSL3-214ENST00000478462 CYP19A1P11511 503 aaPredicted RBP9.86□□□□□ -0.83
MSL3-214ENST00000478462 CRKLP46109 303 aaKnown RBP9.86□□□□□ -0.83
MSL3-214ENST00000478462 R3HDM1Q15032 1099 aaKnown RBP9.86□□□□□ -0.83
MSL3-214ENST00000478462 ZNF827Q17R98 1081 aa9.86□□□□□ -0.83
MSL3-214ENST00000478462 RC3H1Q5TC82 1133 aaKnown RBP9.86□□□□□ -0.83
MSL3-214ENST00000478462 UBR3Q6ZT12 1888 aa9.86□□□□□ -0.83
MSL3-214ENST00000478462 TSR2Q969E8 191 aaKnown RBP9.86□□□□□ -0.83
MSL3-214ENST00000478462 MYH16Q9H6N6 1097 aa9.86□□□□□ -0.83
MSL3-214ENST00000478462 ANO8Q9HCE9 1232 aaPredicted RBP9.86□□□□□ -0.83
MSL3-214ENST00000478462 USP16Q9Y5T5 823 aa9.86□□□□□ -0.83
MSL3-214ENST00000478462 ZNF521Q96K83 1311 aa9.85□□□□□ -0.83
MSL3-214ENST00000478462 CNTNAP4Q9C0A0 1308 aa9.85□□□□□ -0.83
MSL3-214ENST00000478462 CACNA1FO60840 1977 aa9.85□□□□□ -0.83
MSL3-214ENST00000478462 TUBGCP6Q96RT7 1819 aa9.85□□□□□ -0.83
MSL3-214ENST00000478462 PRAMEF22A3QJZ6 481 aa9.85□□□□□ -0.83
MSL3-214ENST00000478462 PSDA5PKW4 1024 aaPredicted RBP9.85□□□□□ -0.83
MSL3-214ENST00000478462 ELL2O00472 640 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms