RNA–Protein interactions for RNA: ENST00000478424.5

ARF1-209, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-209ENST00000478424 IL17REQ8NFR9 667 aa33.32■■■□□ 2.92
ARF1-209ENST00000478424 NUDCQ9Y266 331 aa33.32■■■□□ 2.92
ARF1-209ENST00000478424 UBR2Q8IWV8 1755 aa33.3■■■□□ 2.92
ARF1-209ENST00000478424 U2AF1L5P0DN76 240 aaPredicted RBP33.3■■■□□ 2.92
ARF1-209ENST00000478424 U2AF1Q01081 240 aaKnown RBP eCLIP33.3■■■□□ 2.92
ARF1-209ENST00000478424 VSIG10Q8N0Z9 540 aa33.3■■■□□ 2.92
ARF1-209ENST00000478424 ZNF330Q9Y3S2 320 aaPredicted RBP33.3■■■□□ 2.92
ARF1-209ENST00000478424 POLRMTO00411 1230 aaKnown RBP33.29■■■□□ 2.92
ARF1-209ENST00000478424 PPP2R1AP30153 589 aa33.29■■■□□ 2.92
ARF1-209ENST00000478424 PHACTR3Q96KR7 559 aa33.29■■■□□ 2.92
ARF1-209ENST00000478424 RSPH6AQ9H0K4 717 aa33.29■■■□□ 2.92
ARF1-209ENST00000478424 STARD3NLO95772 234 aa33.28■■■□□ 2.92
ARF1-209ENST00000478424 ZNF496Q96IT1 587 aaPredicted RBP33.28■■■□□ 2.92
ARF1-209ENST00000478424 NARFQ9UHQ1 456 aa33.28■■■□□ 2.92
ARF1-209ENST00000478424 ZNF790Q6PG37 636 aa33.26■■■□□ 2.91
ARF1-209ENST00000478424 PIM2Q9P1W9 311 aa33.26■■■□□ 2.91
ARF1-209ENST00000478424 CHRNA5P30532 468 aa33.25■■■□□ 2.91
ARF1-209ENST00000478424 TM4SF1P30408 202 aa33.24■■■□□ 2.91
ARF1-209ENST00000478424 NFIXQ14938 502 aa33.24■■■□□ 2.91
ARF1-209ENST00000478424 HEG1Q9ULI3 1381 aa33.23■■■□□ 2.91
ARF1-209ENST00000478424 BRCA1P38398 1863 aaKnown RBP33.23■■■□□ 2.91
ARF1-209ENST00000478424 DALRD3Q5D0E6 543 aaKnown RBP33.23■■■□□ 2.91
ARF1-209ENST00000478424 BICDL1Q6ZP65 573 aa33.23■■■□□ 2.91
ARF1-209ENST00000478424 KCNA3P22001 575 aa33.22■■■□□ 2.91
ARF1-209ENST00000478424 FMNL2Q96PY5 1086 aa33.21■■■□□ 2.91
ARF1-209ENST00000478424 SIPA1L3O60292 1781 aaPredicted RBP33.21■■■□□ 2.91
ARF1-209ENST00000478424 BTBD11A6QL63 1104 aa33.2■■■□□ 2.91
ARF1-209ENST00000478424 RTF1Q92541 710 aaKnown RBP33.2■■■□□ 2.91
ARF1-209ENST00000478424 BCL2L12Q9HB09 334 aa33.19■■■□□ 2.9
ARF1-209ENST00000478424 CEMIPQ8WUJ3 1361 aa33.19■■■□□ 2.9
ARF1-209ENST00000478424 A0A087WZG4 1122 aa33.18■■■□□ 2.9
ARF1-209ENST00000478424 TEX13AQ9BXU3 409 aaPredicted RBP33.18■■■□□ 2.9
ARF1-209ENST00000478424 KCNQ3O43525 872 aa33.17■■■□□ 2.9
ARF1-209ENST00000478424 SERPINB2P05120 415 aa33.17■■■□□ 2.9
ARF1-209ENST00000478424 MCM10Q7L590 875 aa33.17■■■□□ 2.9
ARF1-209ENST00000478424 NPM2Q86SE8 214 aaKnown RBP33.17■■■□□ 2.9
ARF1-209ENST00000478424 AFDNP55196 1824 aaKnown RBP33.16■■■□□ 2.9
ARF1-209ENST00000478424 EIF5P55010 431 aaKnown RBP33.16■■■□□ 2.9
ARF1-209ENST00000478424 ARFGEF1Q9Y6D6 1849 aa33.16■■■□□ 2.9
ARF1-209ENST00000478424 TBC1D2BQ9UPU7 963 aa33.15■■■□□ 2.9
ARF1-209ENST00000478424 C9orf131Q5VYM1 1079 aa33.14■■■□□ 2.9
ARF1-209ENST00000478424 A1BGP04217 495 aa33.12■■■□□ 2.89
ARF1-209ENST00000478424 DCTN1Q14203 1278 aa33.12■■■□□ 2.89
ARF1-209ENST00000478424 TBC1D9BQ66K14 1250 aa33.1■■■□□ 2.89
ARF1-209ENST00000478424 CARMIL3Q8ND23 1372 aa33.09■■■□□ 2.89
ARF1-209ENST00000478424 NEFMP07197 916 aa33.09■■■□□ 2.89
ARF1-209ENST00000478424 IL6STP40189 918 aaPredicted RBP33.09■■■□□ 2.89
ARF1-209ENST00000478424 PIP4K2AP48426 406 aaPredicted RBP33.09■■■□□ 2.89
ARF1-209ENST00000478424 C2CD5Q86YS7 1000 aa33.09■■■□□ 2.89
ARF1-209ENST00000478424 RNF181Q9P0P0 153 aa33.09■■■□□ 2.89
ARF1-209ENST00000478424 SCN7AQ01118 1682 aa33.09■■■□□ 2.89
ARF1-209ENST00000478424 KIF3CO14782 793 aa33.08■■■□□ 2.89
ARF1-209ENST00000478424 NPHP1O15259 732 aa33.08■■■□□ 2.89
ARF1-209ENST00000478424 NRXN2Q9P2S2 1712 aa33.08■■■□□ 2.89
ARF1-209ENST00000478424 PRAMEF22A3QJZ6 481 aa33.06■■■□□ 2.88
ARF1-209ENST00000478424 CCDC24Q8N4L8 307 aa33.05■■■□□ 2.88
ARF1-209ENST00000478424 RASSF7Q02833 373 aa33.04■■■□□ 2.88
ARF1-209ENST00000478424 NMRK2Q9NPI5 230 aa33.04■■■□□ 2.88
ARF1-209ENST00000478424 USP16Q9Y5T5 823 aa33.04■■■□□ 2.88
ARF1-209ENST00000478424 H0YIN7 160 aa33.03■■■□□ 2.88
ARF1-209ENST00000478424 DZIP3Q86Y13 1208 aaKnown RBP33.03■■■□□ 2.88
ARF1-209ENST00000478424 SNRPA1P09661 255 aaKnown RBP33.01■■■□□ 2.87
ARF1-209ENST00000478424 HSPA6P17066 643 aa33.01■■■□□ 2.87
ARF1-209ENST00000478424 TTLL6Q8N841 843 aa33.01■■■□□ 2.87
ARF1-209ENST00000478424 CAMTA2O94983 1202 aa33■■■□□ 2.87
ARF1-209ENST00000478424 ZNF622Q969S3 477 aaKnown RBP eCLIP33■■■□□ 2.87
ARF1-209ENST00000478424 DLEC1Q9Y238 1755 aa32.99■■■□□ 2.87
ARF1-209ENST00000478424 SETDB2Q96T68 719 aa32.99■■■□□ 2.87
ARF1-209ENST00000478424 MIS18AQ9NYP9 233 aa32.99■■■□□ 2.87
ARF1-209ENST00000478424 HTATSF1O43719 755 aaKnown RBP32.98■■■□□ 2.87
ARF1-209ENST00000478424 PRR5LQ6MZQ0 368 aa32.98■■■□□ 2.87
ARF1-209ENST00000478424 CNBD1Q8NA66 436 aa32.98■■■□□ 2.87
ARF1-209ENST00000478424 ZNF219Q9P2Y4 722 aaPredicted RBP32.98■■■□□ 2.87
ARF1-209ENST00000478424 TAF7Q15545 349 aaPredicted RBP32.96■■■□□ 2.87
ARF1-209ENST00000478424 C16orf71Q8IYS4 520 aaPredicted RBP32.96■■■□□ 2.87
ARF1-209ENST00000478424 CEP350Q5VT06 3117 aa32.95■■■□□ 2.87
ARF1-209ENST00000478424 ANKRD31Q8N7Z5 1873 aa32.95■■■□□ 2.87
ARF1-209ENST00000478424 PDE6BP35913 854 aa32.95■■■□□ 2.87
ARF1-209ENST00000478424 BCORQ6W2J9 1755 aa32.95■■■□□ 2.87
ARF1-209ENST00000478424 MAPK8IP3Q9UPT6 1336 aa32.95■■■□□ 2.86
ARF1-209ENST00000478424 BRIP1Q9BX63 1249 aa32.94■■■□□ 2.86
ARF1-209ENST00000478424 KDM2BQ8NHM5 1336 aa32.94■■■□□ 2.86
ARF1-209ENST00000478424 ST5P78524 1137 aa32.93■■■□□ 2.86
ARF1-209ENST00000478424 SBF1O95248 1867 aa32.93■■■□□ 2.86
ARF1-209ENST00000478424 TOMM70O94826 608 aa32.92■■■□□ 2.86
ARF1-209ENST00000478424 THUMPD2Q9BTF0 503 aaKnown RBP32.92■■■□□ 2.86
ARF1-209ENST00000478424 ZNF652Q9Y2D9 606 aa32.92■■■□□ 2.86
ARF1-209ENST00000478424 DLG5Q8TDM6 1919 aa32.92■■■□□ 2.86
ARF1-209ENST00000478424 COL11A2P13942 1736 aaPredicted RBP32.91■■■□□ 2.86
ARF1-209ENST00000478424 NFE2L2Q16236 605 aa32.9■■■□□ 2.86
ARF1-209ENST00000478424 NBPF5PQ86XG9 351 aaPredicted RBP32.9■■■□□ 2.86
ARF1-209ENST00000478424 LMNB1P20700 586 aa32.89■■■□□ 2.86
ARF1-209ENST00000478424 NBPF26B4DH59 902 aa32.88■■■□□ 2.85
ARF1-209ENST00000478424 NBPF10Q6P3W6 841 aaKnown RBP32.88■■■□□ 2.85
ARF1-209ENST00000478424 NBPF15Q8N660 670 aa32.88■■■□□ 2.85
ARF1-209ENST00000478424 PLEKHF1Q96S99 279 aa32.88■■■□□ 2.85
ARF1-209ENST00000478424 PDZRN3Q9UPQ7 1066 aa32.88■■■□□ 2.85
ARF1-209ENST00000478424 C21orf2O43822 256 aa32.87■■■□□ 2.85
ARF1-209ENST00000478424 NGEFQ8N5V2 710 aa32.87■■■□□ 2.85
ARF1-209ENST00000478424 PNISRQ8TF01 805 aaKnown RBP32.87■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms