RNA–Protein interactions for RNA: ENST00000478369.5

VANGL1-206, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 3

Gene VANGL1, Length 363 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-206ENST00000478369 PHACTR3Q96KR7 559 aa14.49□□□□□ -0.09
VANGL1-206ENST00000478369 ADCY9O60503 1353 aa14.48□□□□□ -0.09
VANGL1-206ENST00000478369 HEG1Q9ULI3 1381 aa14.48□□□□□ -0.09
VANGL1-206ENST00000478369 SIPA1L3O60292 1781 aaPredicted RBP14.48□□□□□ -0.09
VANGL1-206ENST00000478369 A0A087WZG4 1122 aa14.48□□□□□ -0.09
VANGL1-206ENST00000478369 POLRMTO00411 1230 aaKnown RBP14.48□□□□□ -0.09
VANGL1-206ENST00000478369 HTATSF1O43719 755 aaKnown RBP14.48□□□□□ -0.09
VANGL1-206ENST00000478369 USPL1Q5W0Q7 1092 aa14.48□□□□□ -0.09
VANGL1-206ENST00000478369 FMNL2Q96PY5 1086 aa14.48□□□□□ -0.09
VANGL1-206ENST00000478369 ZBTB1Q9Y2K1 713 aa14.48□□□□□ -0.09
VANGL1-206ENST00000478369 DPEP1P16444 411 aa14.47□□□□□ -0.09
VANGL1-206ENST00000478369 DDR1Q08345 913 aa14.47□□□□□ -0.09
VANGL1-206ENST00000478369 RTF1Q92541 710 aaKnown RBP14.47□□□□□ -0.09
VANGL1-206ENST00000478369 ZNF496Q96IT1 587 aaPredicted RBP14.47□□□□□ -0.09
VANGL1-206ENST00000478369 ATP10DQ9P241 1426 aa14.47□□□□□ -0.09
VANGL1-206ENST00000478369 BTBD11A6QL63 1104 aa14.46□□□□□ -0.09
VANGL1-206ENST00000478369 EIF5P55010 431 aaKnown RBP14.46□□□□□ -0.09
VANGL1-206ENST00000478369 PIM2Q9P1W9 311 aa14.46□□□□□ -0.09
VANGL1-206ENST00000478369 WWC3Q9ULE0 1092 aa14.46□□□□□ -0.09
VANGL1-206ENST00000478369 BCS1LQ9Y276 419 aa14.46□□□□□ -0.09
VANGL1-206ENST00000478369 N4BP2Q86UW6 1770 aaPredicted RBP14.46□□□□□ -0.09
VANGL1-206ENST00000478369 KCNA3P22001 575 aa14.45□□□□□ -0.1
VANGL1-206ENST00000478369 CANXP27824 592 aaKnown RBP14.45□□□□□ -0.1
VANGL1-206ENST00000478369 GPBP1L1Q9HC44 474 aaPredicted RBP14.45□□□□□ -0.1
VANGL1-206ENST00000478369 NEFMP07197 916 aa14.44□□□□□ -0.1
VANGL1-206ENST00000478369 IL6STP40189 918 aaPredicted RBP14.44□□□□□ -0.1
VANGL1-206ENST00000478369 NFIXQ14938 502 aa14.44□□□□□ -0.1
VANGL1-206ENST00000478369 BRCA1P38398 1863 aaKnown RBP14.44□□□□□ -0.1
VANGL1-206ENST00000478369 DALRD3Q5D0E6 543 aaKnown RBP14.43□□□□□ -0.1
VANGL1-206ENST00000478369 NPM2Q86SE8 214 aaKnown RBP14.43□□□□□ -0.1
VANGL1-206ENST00000478369 PNNQ9H307 717 aaKnown RBP14.43□□□□□ -0.1
VANGL1-206ENST00000478369 BCL2L12Q9HB09 334 aa14.43□□□□□ -0.1
VANGL1-206ENST00000478369 NRXN2Q9P2S2 1712 aa14.42□□□□□ -0.1
VANGL1-206ENST00000478369 ARHGAP27Q6ZUM4 889 aa14.42□□□□□ -0.1
VANGL1-206ENST00000478369 ARFGEF1Q9Y6D6 1849 aa14.41□□□□□ -0.1
VANGL1-206ENST00000478369 SERPINB2P05120 415 aa14.41□□□□□ -0.1
VANGL1-206ENST00000478369 SNRPA1P09661 255 aaKnown RBP14.41□□□□□ -0.1
VANGL1-206ENST00000478369 ZEB1P37275 1124 aaPredicted RBP14.41□□□□□ -0.1
VANGL1-206ENST00000478369 MCM10Q7L590 875 aa14.41□□□□□ -0.1
VANGL1-206ENST00000478369 RALBP1Q15311 655 aa14.4□□□□□ -0.1
VANGL1-206ENST00000478369 TAF7Q15545 349 aaPredicted RBP14.4□□□□□ -0.1
VANGL1-206ENST00000478369 PDZRN3Q9UPQ7 1066 aa14.4□□□□□ -0.1
VANGL1-206ENST00000478369 SENP3-EIF4A1A0A087X0R7 540 aa14.39□□□□□ -0.11
VANGL1-206ENST00000478369 KCNQ3O43525 872 aa14.39□□□□□ -0.11
VANGL1-206ENST00000478369 A1BGP04217 495 aa14.39□□□□□ -0.11
VANGL1-206ENST00000478369 CHRNA5P30532 468 aa14.39□□□□□ -0.11
VANGL1-206ENST00000478369 PNISRQ8TF01 805 aaKnown RBP14.39□□□□□ -0.11
VANGL1-206ENST00000478369 PLEKHF1Q96S99 279 aa14.39□□□□□ -0.11
VANGL1-206ENST00000478369 SCN7AQ01118 1682 aa14.39□□□□□ -0.11
VANGL1-206ENST00000478369 AFDNP55196 1824 aaKnown RBP14.38□□□□□ -0.11
VANGL1-206ENST00000478369 RGL2O15211 777 aa14.38□□□□□ -0.11
VANGL1-206ENST00000478369 ZNF330Q9Y3S2 320 aaPredicted RBP14.38□□□□□ -0.11
VANGL1-206ENST00000478369 USP16Q9Y5T5 823 aa14.38□□□□□ -0.11
VANGL1-206ENST00000478369 CARMIL3Q8ND23 1372 aa14.37□□□□□ -0.11
VANGL1-206ENST00000478369 DCTN1Q14203 1278 aa14.37□□□□□ -0.11
VANGL1-206ENST00000478369 TBC1D9BQ66K14 1250 aa14.37□□□□□ -0.11
VANGL1-206ENST00000478369 CLEC4GQ6UXB4 293 aa14.37□□□□□ -0.11
VANGL1-206ENST00000478369 ZNF526Q8TF50 670 aaPredicted RBP14.37□□□□□ -0.11
VANGL1-206ENST00000478369 TBC1D2BQ9UPU7 963 aa14.37□□□□□ -0.11
VANGL1-206ENST00000478369 H0YIN7 160 aa14.36□□□□□ -0.11
VANGL1-206ENST00000478369 CAMTA2O94983 1202 aa14.36□□□□□ -0.11
VANGL1-206ENST00000478369 PDE6BP35913 854 aa14.36□□□□□ -0.11
VANGL1-206ENST00000478369 NFE2L2Q16236 605 aa14.36□□□□□ -0.11
VANGL1-206ENST00000478369 BICDL1Q6ZP65 573 aa14.36□□□□□ -0.11
VANGL1-206ENST00000478369 DZIP3Q86Y13 1208 aaKnown RBP14.36□□□□□ -0.11
VANGL1-206ENST00000478369 TTLL6Q8N841 843 aa14.36□□□□□ -0.11
VANGL1-206ENST00000478369 SETDB2Q96T68 719 aa14.36□□□□□ -0.11
VANGL1-206ENST00000478369 BRIP1Q9BX63 1249 aa14.36□□□□□ -0.11
VANGL1-206ENST00000478369 MAPK8IP3Q9UPT6 1336 aa14.36□□□□□ -0.11
VANGL1-206ENST00000478369 DLEC1Q9Y238 1755 aa14.35□□□□□ -0.11
VANGL1-206ENST00000478369 C9orf131Q5VYM1 1079 aa14.35□□□□□ -0.11
VANGL1-206ENST00000478369 C2CD5Q86YS7 1000 aa14.35□□□□□ -0.11
VANGL1-206ENST00000478369 ZNF652Q9Y2D9 606 aa14.35□□□□□ -0.11
VANGL1-206ENST00000478369 KIF3CO14782 793 aa14.34□□□□□ -0.11
VANGL1-206ENST00000478369 ZC3H4Q9UPT8 1303 aaKnown RBP14.34□□□□□ -0.11
VANGL1-206ENST00000478369 BCORQ6W2J9 1755 aa14.33□□□□□ -0.12
VANGL1-206ENST00000478369 PRAMEF22A3QJZ6 481 aa14.33□□□□□ -0.12
VANGL1-206ENST00000478369 PRR5LQ6MZQ0 368 aa14.33□□□□□ -0.12
VANGL1-206ENST00000478369 DLG5Q8TDM6 1919 aa14.33□□□□□ -0.12
VANGL1-206ENST00000478369 ST5P78524 1137 aa14.32□□□□□ -0.12
VANGL1-206ENST00000478369 CNBD1Q8NA66 436 aa14.32□□□□□ -0.12
VANGL1-206ENST00000478369 RNF181Q9P0P0 153 aa14.32□□□□□ -0.12
VANGL1-206ENST00000478369 MYBBP1AQ9BQG0 1328 aaKnown RBP14.32□□□□□ -0.12
VANGL1-206ENST00000478369 NBPF26B4DH59 902 aa14.31□□□□□ -0.12
VANGL1-206ENST00000478369 NPHP1O15259 732 aa14.31□□□□□ -0.12
VANGL1-206ENST00000478369 EIF4A1P60842 406 aaKnown RBP14.31□□□□□ -0.12
VANGL1-206ENST00000478369 DDX10Q13206 875 aaKnown RBP14.31□□□□□ -0.12
VANGL1-206ENST00000478369 NBPF10Q6P3W6 841 aaKnown RBP14.31□□□□□ -0.12
VANGL1-206ENST00000478369 NBPF15Q8N660 670 aa14.31□□□□□ -0.12
VANGL1-206ENST00000478369 BABAM1Q9NWV8 329 aa14.31□□□□□ -0.12
VANGL1-206ENST00000478369 MIS18AQ9NYP9 233 aa14.31□□□□□ -0.12
VANGL1-206ENST00000478369 KDM2BQ8NHM5 1336 aa14.31□□□□□ -0.12
VANGL1-206ENST00000478369 KDM3BQ7LBC6 1761 aa14.31□□□□□ -0.12
VANGL1-206ENST00000478369 LAMB4A4D0S4 1761 aa14.3□□□□□ -0.12
VANGL1-206ENST00000478369 TOMM70O94826 608 aa14.3□□□□□ -0.12
VANGL1-206ENST00000478369 HSPA6P17066 643 aa14.3□□□□□ -0.12
VANGL1-206ENST00000478369 LMNB1P20700 586 aa14.3□□□□□ -0.12
VANGL1-206ENST00000478369 PIP4K2AP48426 406 aaPredicted RBP14.3□□□□□ -0.12
VANGL1-206ENST00000478369 LMOD3Q0VAK6 560 aa14.3□□□□□ -0.12
VANGL1-206ENST00000478369 ANKRD31Q8N7Z5 1873 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms