RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 SOS1Q07889 1333 aaPredicted RBP13.14□□□□□ -0.31
CCM2-210ENST00000478169 CHRNA5P30532 468 aa13.14□□□□□ -0.31
CCM2-210ENST00000478169 LGR6Q9HBX8 967 aa13.14□□□□□ -0.31
CCM2-210ENST00000478169 MRC1P22897 1456 aa13.14□□□□□ -0.31
CCM2-210ENST00000478169 DLEC1Q9Y238 1755 aa13.14□□□□□ -0.31
CCM2-210ENST00000478169 KCPQ6ZWJ8 1503 aa13.13□□□□□ -0.31
CCM2-210ENST00000478169 NRXN2Q9P2S2 1712 aa13.13□□□□□ -0.31
CCM2-210ENST00000478169 RNMTO43148 476 aaKnown RBP13.13□□□□□ -0.31
CCM2-210ENST00000478169 CYP19A1P11511 503 aaPredicted RBP13.13□□□□□ -0.31
CCM2-210ENST00000478169 NARFQ9UHQ1 456 aa13.13□□□□□ -0.31
CCM2-210ENST00000478169 ZC3H4Q9UPT8 1303 aaKnown RBP13.13□□□□□ -0.31
CCM2-210ENST00000478169 AMER1Q5JTC6 1135 aaPredicted RBP13.12□□□□□ -0.31
CCM2-210ENST00000478169 VSIG10Q8N0Z9 540 aa13.12□□□□□ -0.31
CCM2-210ENST00000478169 COL15A1P39059 1388 aa13.11□□□□□ -0.31
CCM2-210ENST00000478169 SLC39A6Q13433 755 aa13.11□□□□□ -0.31
CCM2-210ENST00000478169 NFIXQ14938 502 aa13.11□□□□□ -0.31
CCM2-210ENST00000478169 RRAGCQ9HB90 399 aa13.11□□□□□ -0.31
CCM2-210ENST00000478169 UBR2Q8IWV8 1755 aa13.11□□□□□ -0.31
CCM2-210ENST00000478169 JMYQ8N9B5 988 aa13.1□□□□□ -0.31
CCM2-210ENST00000478169 KLRG1Q96E93 195 aa13.1□□□□□ -0.31
CCM2-210ENST00000478169 ZBTB1Q9Y2K1 713 aa13.1□□□□□ -0.31
CCM2-210ENST00000478169 SERPINB2P05120 415 aa13.09□□□□□ -0.31
CCM2-210ENST00000478169 HMOX1P09601 288 aa13.09□□□□□ -0.31
CCM2-210ENST00000478169 LMNB1P20700 586 aa13.09□□□□□ -0.31
CCM2-210ENST00000478169 MTHFSDQ2M296 383 aaKnown RBP13.09□□□□□ -0.31
CCM2-210ENST00000478169 TTLL6Q8N841 843 aa13.09□□□□□ -0.31
CCM2-210ENST00000478169 SMC1BQ8NDV3 1235 aa13.09□□□□□ -0.31
CCM2-210ENST00000478169 BCL2L12Q9HB09 334 aa13.09□□□□□ -0.31
CCM2-210ENST00000478169 DICER1Q9UPY3 1922 aaKnown RBP13.08□□□□□ -0.32
CCM2-210ENST00000478169 GLTPD2A6NH11 291 aa13.08□□□□□ -0.32
CCM2-210ENST00000478169 A0A087WZG4 1122 aa13.07□□□□□ -0.32
CCM2-210ENST00000478169 DIAPH1O60610 1272 aaKnown RBP13.07□□□□□ -0.32
CCM2-210ENST00000478169 STARD3NLO95772 234 aa13.07□□□□□ -0.32
CCM2-210ENST00000478169 VEGFAP15692 232 aaPredicted RBP13.07□□□□□ -0.32
CCM2-210ENST00000478169 HTRA3P83110 453 aa13.07□□□□□ -0.32
CCM2-210ENST00000478169 RASSF7Q02833 373 aa13.07□□□□□ -0.32
CCM2-210ENST00000478169 PDZRN3Q9UPQ7 1066 aa13.07□□□□□ -0.32
CCM2-210ENST00000478169 TIAM2Q8IVF5 1701 aa13.06□□□□□ -0.32
CCM2-210ENST00000478169 H0YIN7 160 aa13.06□□□□□ -0.32
CCM2-210ENST00000478169 CANXP27824 592 aaKnown RBP13.06□□□□□ -0.32
CCM2-210ENST00000478169 EIF5P55010 431 aaKnown RBP13.06□□□□□ -0.32
CCM2-210ENST00000478169 C2CD5Q86YS7 1000 aa13.06□□□□□ -0.32
CCM2-210ENST00000478169 TTC5Q8N0Z6 440 aa13.06□□□□□ -0.32
CCM2-210ENST00000478169 TEX13AQ9BXU3 409 aaPredicted RBP13.06□□□□□ -0.32
CCM2-210ENST00000478169 ANKRD31Q8N7Z5 1873 aa13.06□□□□□ -0.32
CCM2-210ENST00000478169 SIPA1L3O60292 1781 aaPredicted RBP13.05□□□□□ -0.32
CCM2-210ENST00000478169 PER1O15534 1290 aaPredicted RBP13.05□□□□□ -0.32
CCM2-210ENST00000478169 FER1L6Q2WGJ9 1857 aa13.05□□□□□ -0.32
CCM2-210ENST00000478169 KIF7Q2M1P5 1343 aa13.05□□□□□ -0.32
CCM2-210ENST00000478169 PRELPP51888 382 aa13.04□□□□□ -0.32
CCM2-210ENST00000478169 SCN7AQ01118 1682 aa13.03□□□□□ -0.32
CCM2-210ENST00000478169 PDE6BP35913 854 aa13.03□□□□□ -0.32
CCM2-210ENST00000478169 TEFQ10587 303 aa13.03□□□□□ -0.32
CCM2-210ENST00000478169 DPY19L2Q6NUT2 758 aa13.03□□□□□ -0.32
CCM2-210ENST00000478169 ZNF790Q6PG37 636 aa13.03□□□□□ -0.32
CCM2-210ENST00000478169 BICDL1Q6ZP65 573 aa13.03□□□□□ -0.32
CCM2-210ENST00000478169 GAS2L2Q8NHY3 880 aa13.03□□□□□ -0.32
CCM2-210ENST00000478169 BRIP1Q9BX63 1249 aa13.03□□□□□ -0.32
CCM2-210ENST00000478169 CARMIL3Q8ND23 1372 aa13.03□□□□□ -0.32
CCM2-210ENST00000478169 GNAT3A8MTJ3 354 aa13.02□□□□□ -0.33
CCM2-210ENST00000478169 NFKBIEO00221 500 aa13.02□□□□□ -0.33
CCM2-210ENST00000478169 IL6STP40189 918 aaPredicted RBP13.02□□□□□ -0.33
CCM2-210ENST00000478169 CC2D1BQ5T0F9 858 aaKnown RBP13.02□□□□□ -0.33
CCM2-210ENST00000478169 TBC1D9BQ66K14 1250 aa13.02□□□□□ -0.33
CCM2-210ENST00000478169 IL17REQ8NFR9 667 aa13.02□□□□□ -0.33
CCM2-210ENST00000478169 CCER1Q8TC90 406 aaPredicted RBP13.02□□□□□ -0.33
CCM2-210ENST00000478169 ZNF496Q96IT1 587 aaPredicted RBP13.02□□□□□ -0.33
CCM2-210ENST00000478169 HEG1Q9ULI3 1381 aa13.02□□□□□ -0.33
CCM2-210ENST00000478169 COL13A1Q5TAT6 717 aaPredicted RBP13.01□□□□□ -0.33
CCM2-210ENST00000478169 ZNF622Q969S3 477 aaKnown RBP eCLIP13.01□□□□□ -0.33
CCM2-210ENST00000478169 NPC1L1Q9UHC9 1359 aa13.01□□□□□ -0.33
CCM2-210ENST00000478169 CACNA1SQ13698 1873 aa13□□□□□ -0.33
CCM2-210ENST00000478169 SLX4Q8IY92 1834 aa13□□□□□ -0.33
CCM2-210ENST00000478169 COL11A2P13942 1736 aaPredicted RBP13□□□□□ -0.33
CCM2-210ENST00000478169 COL3A1P02461 1466 aaPredicted RBP13□□□□□ -0.33
CCM2-210ENST00000478169 POTECB2RU33 542 aa13□□□□□ -0.33
CCM2-210ENST00000478169 PRR5LQ6MZQ0 368 aa13□□□□□ -0.33
CCM2-210ENST00000478169 NPM2Q86SE8 214 aaKnown RBP13□□□□□ -0.33
CCM2-210ENST00000478169 FMNL2Q96PY5 1086 aa13□□□□□ -0.33
CCM2-210ENST00000478169 TBC1D2BQ9UPU7 963 aa13□□□□□ -0.33
CCM2-210ENST00000478169 PCNTO95613 3336 aa13□□□□□ -0.33
CCM2-210ENST00000478169 ARFGEF2Q9Y6D5 1785 aa12.99□□□□□ -0.33
CCM2-210ENST00000478169 LTBP3Q9NS15 1303 aa12.99□□□□□ -0.33
CCM2-210ENST00000478169 U2SURPO15042 1029 aaKnown RBP12.99□□□□□ -0.33
CCM2-210ENST00000478169 C21orf2O43822 256 aa12.99□□□□□ -0.33
CCM2-210ENST00000478169 ERFEQ4G0M1 354 aa12.99□□□□□ -0.33
CCM2-210ENST00000478169 CNKSR1Q969H4 720 aa12.99□□□□□ -0.33
CCM2-210ENST00000478169 SETDB2Q96T68 719 aa12.99□□□□□ -0.33
CCM2-210ENST00000478169 ZNF330Q9Y3S2 320 aaPredicted RBP12.99□□□□□ -0.33
CCM2-210ENST00000478169 BCORQ6W2J9 1755 aa12.99□□□□□ -0.33
CCM2-210ENST00000478169 CEMIPQ8WUJ3 1361 aa12.98□□□□□ -0.33
CCM2-210ENST00000478169 STYK1Q6J9G0 422 aa12.98□□□□□ -0.33
CCM2-210ENST00000478169 CNBD1Q8NA66 436 aa12.98□□□□□ -0.33
CCM2-210ENST00000478169 TAOK3Q9H2K8 898 aa12.98□□□□□ -0.33
CCM2-210ENST00000478169 NPHP1O15259 732 aa12.97□□□□□ -0.33
CCM2-210ENST00000478169 CAMTA2O94983 1202 aa12.97□□□□□ -0.33
CCM2-210ENST00000478169 A1BGP04217 495 aa12.97□□□□□ -0.33
CCM2-210ENST00000478169 ST5P78524 1137 aa12.97□□□□□ -0.33
CCM2-210ENST00000478169 SOGA3Q5TF21 947 aa12.97□□□□□ -0.33
CCM2-210ENST00000478169 BTBD11A6QL63 1104 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms