RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 LMBR1LQ6UX01 489 aa14.23□□□□□ -0.13
SGSM3-209ENST00000478085 LINS1Q8NG48 757 aa14.23□□□□□ -0.13
SGSM3-209ENST00000478085 PLEKHF1Q96S99 279 aa14.23□□□□□ -0.13
SGSM3-209ENST00000478085 PA2G4Q9UQ80 394 aaKnown RBP14.23□□□□□ -0.13
SGSM3-209ENST00000478085 RHPN1Q8TCX5 695 aa14.23□□□□□ -0.13
SGSM3-209ENST00000478085 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.23□□□□□ -0.138e-7■■■□□ 16.9
SGSM3-209ENST00000478085 SNRKQ9NRH2 765 aa14.23□□□□□ -0.13
SGSM3-209ENST00000478085 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.22□□□□□ -0.13
SGSM3-209ENST00000478085 ZBTB7BO15156 539 aaPredicted RBP14.22□□□□□ -0.13
SGSM3-209ENST00000478085 STK3Q13188 491 aa14.22□□□□□ -0.13
SGSM3-209ENST00000478085 ARHGEF25Q86VW2 580 aa14.22□□□□□ -0.13
SGSM3-209ENST00000478085 LRP2BPQ9P2M1 347 aa14.22□□□□□ -0.13
SGSM3-209ENST00000478085 IFIT1P09914 478 aaKnown RBP14.22□□□□□ -0.13
SGSM3-209ENST00000478085 CDK11BP21127 795 aaKnown RBP14.22□□□□□ -0.13
SGSM3-209ENST00000478085 CHMP4CQ96CF2 233 aa14.22□□□□□ -0.13
SGSM3-209ENST00000478085 TRIM34Q9BYJ4 488 aa14.22□□□□□ -0.13
SGSM3-209ENST00000478085 CROCC2H7BZ55 1655 aa14.22□□□□□ -0.13
SGSM3-209ENST00000478085 NUCB1Q02818 461 aa14.22□□□□□ -0.13
SGSM3-209ENST00000478085 ZNF496Q96IT1 587 aaPredicted RBP14.22□□□□□ -0.13
SGSM3-209ENST00000478085 DDX21Q9NR30 783 aaKnown RBP eCLIP14.22□□□□□ -0.13
SGSM3-209ENST00000478085 USP6P35125 1406 aa14.22□□□□□ -0.13
SGSM3-209ENST00000478085 FAM135BQ49AJ0 1406 aa14.21□□□□□ -0.13
SGSM3-209ENST00000478085 A1BGP04217 495 aa14.21□□□□□ -0.13
SGSM3-209ENST00000478085 ATP8B2P98198 1209 aa14.21□□□□□ -0.13
SGSM3-209ENST00000478085 TRIM29Q14134 588 aa14.21□□□□□ -0.13
SGSM3-209ENST00000478085 ECHDC1Q9NTX5 307 aa14.21□□□□□ -0.13
SGSM3-209ENST00000478085 CYP46A1Q9Y6A2 500 aa14.21□□□□□ -0.13
SGSM3-209ENST00000478085 PCDH11XQ9BZA7 1347 aa14.21□□□□□ -0.13
SGSM3-209ENST00000478085 PCDH11YQ9BZA8 1340 aa14.21□□□□□ -0.13
SGSM3-209ENST00000478085 CHAF1AQ13111 956 aaPredicted RBP14.21□□□□□ -0.14
SGSM3-209ENST00000478085 SAMD1Q6SPF0 538 aaPredicted RBP14.21□□□□□ -0.14
SGSM3-209ENST00000478085 MAP3K4Q9Y6R4 1608 aa14.21□□□□□ -0.14
SGSM3-209ENST00000478085 BLMP54132 1417 aaPredicted RBP14.21□□□□□ -0.14
SGSM3-209ENST00000478085 ANKRD18BA2A2Z9 1011 aa14.2□□□□□ -0.14
SGSM3-209ENST00000478085 JAKMIP1Q96N16 626 aaKnown RBP14.2□□□□□ -0.14
SGSM3-209ENST00000478085 RAI14Q9P0K7 980 aa14.2□□□□□ -0.14
SGSM3-209ENST00000478085 TBC1D9Q6ZT07 1266 aa14.2□□□□□ -0.14
SGSM3-209ENST00000478085 AKAP2Q9Y2D5 859 aa14.2□□□□□ -0.14
SGSM3-209ENST00000478085 ARHGEF10O15013 1369 aa14.2□□□□□ -0.14
SGSM3-209ENST00000478085 ALDH1L1O75891 902 aa14.2□□□□□ -0.14
SGSM3-209ENST00000478085 PRIM1P49642 420 aaKnown RBP14.2□□□□□ -0.14
SGSM3-209ENST00000478085 CEP85Q6P2H3 762 aa14.2□□□□□ -0.14
SGSM3-209ENST00000478085 INSRP06213 1382 aa14.2□□□□□ -0.14
SGSM3-209ENST00000478085 E9PCH4 1651 aa14.2□□□□□ -0.14
SGSM3-209ENST00000478085 BMP2KLQ5H9B9 411 aa14.2□□□□□ -0.14
SGSM3-209ENST00000478085 MARCH6O60337 910 aa14.19□□□□□ -0.14
SGSM3-209ENST00000478085 SLC52A2Q9HAB3 445 aa14.19□□□□□ -0.14
SGSM3-209ENST00000478085 FAM98CQ17RN3 349 aaKnown RBP14.19□□□□□ -0.14
SGSM3-209ENST00000478085 AK7Q96M32 723 aa14.19□□□□□ -0.14
SGSM3-209ENST00000478085 VPS53Q5VIR6 699 aa14.19□□□□□ -0.14
SGSM3-209ENST00000478085 BLOC1S2Q6QNY1 142 aa14.19□□□□□ -0.14
SGSM3-209ENST00000478085 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.19□□□□□ -0.14
SGSM3-209ENST00000478085 KIAA0232Q92628 1395 aa14.18□□□□□ -0.14
SGSM3-209ENST00000478085 DIP2CQ9Y2E4 1556 aa14.18□□□□□ -0.14
SGSM3-209ENST00000478085 ZMYM4Q5VZL5 1548 aa14.18□□□□□ -0.14
SGSM3-209ENST00000478085 K7ELQ4 463 aaPredicted RBP14.18□□□□□ -0.14
SGSM3-209ENST00000478085 EIF4A1P60842 406 aaKnown RBP14.18□□□□□ -0.14
SGSM3-209ENST00000478085 USP19O94966 1318 aa14.18□□□□□ -0.14
SGSM3-209ENST00000478085 RFC4P35249 363 aa14.18□□□□□ -0.14
SGSM3-209ENST00000478085 PRPF40BQ6NWY9 871 aaKnown RBP14.18□□□□□ -0.14
SGSM3-209ENST00000478085 AATKQ6ZMQ8 1374 aa14.18□□□□□ -0.14
SGSM3-209ENST00000478085 SPHKAPQ2M3C7 1700 aa14.17□□□□□ -0.14
SGSM3-209ENST00000478085 SDSP20132 328 aa14.17□□□□□ -0.14
SGSM3-209ENST00000478085 MCM2P49736 904 aa14.17□□□□□ -0.14
SGSM3-209ENST00000478085 NAP1L5Q96NT1 182 aaPredicted RBP14.17□□□□□ -0.14
SGSM3-209ENST00000478085 CEP152O94986 1710 aa14.17□□□□□ -0.14
SGSM3-209ENST00000478085 PDE1AP54750 535 aa14.17□□□□□ -0.14
SGSM3-209ENST00000478085 DZIP3Q86Y13 1208 aaKnown RBP14.17□□□□□ -0.14
SGSM3-209ENST00000478085 DCTPP1Q9H773 170 aa14.17□□□□□ -0.14
SGSM3-209ENST00000478085 GOLIM4O00461 696 aa14.17□□□□□ -0.14
SGSM3-209ENST00000478085 USP16Q9Y5T5 823 aa14.17□□□□□ -0.14
SGSM3-209ENST00000478085 BCORL1Q5H9F3 1711 aa14.17□□□□□ -0.14
SGSM3-209ENST00000478085 CREBRFQ8IUR6 639 aa14.17□□□□□ -0.14
SGSM3-209ENST00000478085 IL27Q8NEV9 243 aa14.17□□□□□ -0.14
SGSM3-209ENST00000478085 BICD2Q8TD16 824 aa14.17□□□□□ -0.14
SGSM3-209ENST00000478085 ANKIB1Q9P2G1 1089 aa14.17□□□□□ -0.14
SGSM3-209ENST00000478085 NIP7Q9Y221 180 aaKnown RBP eCLIP14.17□□□□□ -0.14
SGSM3-209ENST00000478085 ATP7BP35670 1465 aa14.16□□□□□ -0.14
SGSM3-209ENST00000478085 TTC22Q5TAA0 569 aa14.16□□□□□ -0.14
SGSM3-209ENST00000478085 LARP6Q9BRS8 491 aaKnown RBP14.16□□□□□ -0.14
SGSM3-209ENST00000478085 SKOR2Q2VWA4 1001 aaPredicted RBP14.16□□□□□ -0.14
SGSM3-209ENST00000478085 SMC5Q8IY18 1101 aa14.16□□□□□ -0.14
SGSM3-209ENST00000478085 ALKQ9UM73 1620 aa14.16□□□□□ -0.14
SGSM3-209ENST00000478085 GOLGA6L6A8MZA4 724 aa14.16□□□□□ -0.14
SGSM3-209ENST00000478085 ATP2B1P20020 1258 aa14.16□□□□□ -0.14
SGSM3-209ENST00000478085 DNAJC10Q8IXB1 793 aa14.16□□□□□ -0.14
SGSM3-209ENST00000478085 NACAP1Q9BZK3 213 aa14.16□□□□□ -0.14
SGSM3-209ENST00000478085 BCL11BQ9C0K0 894 aaPredicted RBP14.16□□□□□ -0.14
SGSM3-209ENST00000478085 ZNF219Q9P2Y4 722 aaPredicted RBP14.16□□□□□ -0.14
SGSM3-209ENST00000478085 TRPM1Q7Z4N2 1603 aa14.15□□□□□ -0.14
SGSM3-209ENST00000478085 CASTP20810 708 aaKnown RBP14.15□□□□□ -0.14
SGSM3-209ENST00000478085 SART3Q15020 963 aaKnown RBP14.15□□□□□ -0.14
SGSM3-209ENST00000478085 ZSCAN25Q6NSZ9 544 aa14.15□□□□□ -0.14
SGSM3-209ENST00000478085 NBPF7P0C2Y1 421 aaPredicted RBP14.15□□□□□ -0.14
SGSM3-209ENST00000478085 SMARCC1Q92922 1105 aaPredicted RBP14.15□□□□□ -0.14
SGSM3-209ENST00000478085 CCDC34Q96HJ3 373 aa14.15□□□□□ -0.14
SGSM3-209ENST00000478085 KIDINS220Q9ULH0 1771 aa14.15□□□□□ -0.14
SGSM3-209ENST00000478085 NRDCO43847 1150 aa14.15□□□□□ -0.14
SGSM3-209ENST00000478085 PHKG2P15735 406 aa14.15□□□□□ -0.14
SGSM3-209ENST00000478085 TDO2P48775 406 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms