RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 ADAMTS2O95450 1211 aa10.38□□□□□ -0.75
USP33-208ENST00000477949 KCNH2Q12809 1159 aa10.38□□□□□ -0.75
USP33-208ENST00000477949 DESI1Q6ICB0 168 aa10.38□□□□□ -0.75
USP33-208ENST00000477949 ZC3H15Q8WU90 426 aaKnown RBP10.38□□□□□ -0.75
USP33-208ENST00000477949 UNC93B1Q9H1C4 597 aa10.38□□□□□ -0.75
USP33-208ENST00000477949 USP21Q9UK80 565 aa10.38□□□□□ -0.75
USP33-208ENST00000477949 MYOM3Q5VTT5 1437 aa10.38□□□□□ -0.75
USP33-208ENST00000477949 UNC13BO14795 1591 aa10.38□□□□□ -0.75
USP33-208ENST00000477949 GLI3P10071 1580 aa10.38□□□□□ -0.75
USP33-208ENST00000477949 SPHKAPQ2M3C7 1700 aa10.38□□□□□ -0.75
USP33-208ENST00000477949 MYOM2P54296 1465 aa10.37□□□□□ -0.75
USP33-208ENST00000477949 RPRD2Q5VT52 1461 aaKnown RBP10.37□□□□□ -0.75
USP33-208ENST00000477949 ABCC5O15440 1437 aa10.37□□□□□ -0.75
USP33-208ENST00000477949 MTMR2Q13614 643 aa10.37□□□□□ -0.75
USP33-208ENST00000477949 GIGYF2Q6Y7W6 1299 aaKnown RBP10.37□□□□□ -0.75
USP33-208ENST00000477949 DEFB132Q7Z7B7 95 aa10.37□□□□□ -0.75
USP33-208ENST00000477949 NALCNQ8IZF0 1738 aa10.37□□□□□ -0.75
USP33-208ENST00000477949 BCANQ96GW7 911 aa10.37□□□□□ -0.75
USP33-208ENST00000477949 BEGAINQ9BUH8 593 aa10.37□□□□□ -0.75
USP33-208ENST00000477949 KANK1Q14678 1352 aa10.37□□□□□ -0.75
USP33-208ENST00000477949 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.36□□□□□ -0.75
USP33-208ENST00000477949 CAPN5O15484 640 aaPredicted RBP10.36□□□□□ -0.75
USP33-208ENST00000477949 YY1P25490 414 aa10.36□□□□□ -0.75
USP33-208ENST00000477949 GJA5P36382 358 aa10.36□□□□□ -0.75
USP33-208ENST00000477949 DIXDC1Q155Q3 683 aa10.36□□□□□ -0.75
USP33-208ENST00000477949 BAP1Q92560 729 aa10.36□□□□□ -0.75
USP33-208ENST00000477949 MARF1Q9Y4F3 1742 aaKnown RBP10.36□□□□□ -0.75
USP33-208ENST00000477949 BRWD3Q6RI45 1802 aa10.35□□□□□ -0.75
USP33-208ENST00000477949 ADGRL3Q9HAR2 1447 aa10.35□□□□□ -0.75
USP33-208ENST00000477949 AMOTL2Q9Y2J4 779 aa10.35□□□□□ -0.75
USP33-208ENST00000477949 SOS2Q07890 1332 aaPredicted RBP10.34□□□□□ -0.75
USP33-208ENST00000477949 SENP3-EIF4A1A0A087X0R7 540 aa10.34□□□□□ -0.75
USP33-208ENST00000477949 HRCP23327 699 aa10.34□□□□□ -0.75
USP33-208ENST00000477949 INSM1Q01101 510 aaPredicted RBP10.34□□□□□ -0.75
USP33-208ENST00000477949 PLEKHG3A1L390 1219 aa10.33□□□□□ -0.76
USP33-208ENST00000477949 PPP1R15AO75807 674 aaPredicted RBP10.33□□□□□ -0.76
USP33-208ENST00000477949 VARSP26640 1264 aaKnown RBP10.33□□□□□ -0.76
USP33-208ENST00000477949 LINC01559Q495D7 138 aa10.33□□□□□ -0.76
USP33-208ENST00000477949 TBC1D2Q9BYX2 928 aa10.33□□□□□ -0.76
USP33-208ENST00000477949 RRP7BPQ9NSQ0 103 aa10.33□□□□□ -0.76
USP33-208ENST00000477949 C1orf167Q5SNV9 1468 aa10.33□□□□□ -0.76
USP33-208ENST00000477949 MPNDQ8N594 471 aa10.32□□□□□ -0.76
USP33-208ENST00000477949 ZNF511Q8NB15 262 aa10.32□□□□□ -0.76
USP33-208ENST00000477949 STK17AQ9UEE5 414 aa10.32□□□□□ -0.76
USP33-208ENST00000477949 RALGAPBQ86X10 1494 aa10.31□□□□□ -0.76
USP33-208ENST00000477949 RSBN1LQ6PCB5 846 aaPredicted RBP10.31□□□□□ -0.76
USP33-208ENST00000477949 LYPD8Q6UX82 237 aa10.31□□□□□ -0.76
USP33-208ENST00000477949 TRIM46Q7Z4K8 759 aa10.31□□□□□ -0.76
USP33-208ENST00000477949 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.31□□□□□ -0.76
USP33-208ENST00000477949 SLC16A10Q8TF71 515 aa10.31□□□□□ -0.76
USP33-208ENST00000477949 GJD4Q96KN9 370 aaPredicted RBP10.31□□□□□ -0.76
USP33-208ENST00000477949 PTPN23Q9H3S7 1636 aa10.31□□□□□ -0.76
USP33-208ENST00000477949 DAPK1P53355 1430 aa10.31□□□□□ -0.76
USP33-208ENST00000477949 PCDHB15Q9Y5E8 787 aa10.3□□□□□ -0.76
USP33-208ENST00000477949 METP08581 1390 aa10.29□□□□□ -0.76
USP33-208ENST00000477949 SLIT2O94813 1529 aa10.29□□□□□ -0.76
USP33-208ENST00000477949 SPTLC1O15269 473 aa10.29□□□□□ -0.76
USP33-208ENST00000477949 CTHP32929 405 aa10.29□□□□□ -0.76
USP33-208ENST00000477949 LCE2CQ5TA81 110 aa10.29□□□□□ -0.76
USP33-208ENST00000477949 NXF1Q9UBU9 619 aaKnown RBP10.29□□□□□ -0.76
USP33-208ENST00000477949 TRIM66O15016 1216 aa10.28□□□□□ -0.76
USP33-208ENST00000477949 BMP1P13497 986 aa10.28□□□□□ -0.76
USP33-208ENST00000477949 PARP9Q8IXQ6 854 aa10.28□□□□□ -0.76
USP33-208ENST00000477949 IQGAP3Q86VI3 1631 aa10.27□□□□□ -0.77
USP33-208ENST00000477949 AK7Q96M32 723 aa10.27□□□□□ -0.77
USP33-208ENST00000477949 ORAI2Q96SN7 254 aa10.27□□□□□ -0.77
USP33-208ENST00000477949 TLL2Q9Y6L7 1015 aa10.27□□□□□ -0.77
USP33-208ENST00000477949 PXDNQ92626 1479 aa10.27□□□□□ -0.77
USP33-208ENST00000477949 E9PCH4 1651 aa10.27□□□□□ -0.77
USP33-208ENST00000477949 ADGRL2O95490 1459 aa10.26□□□□□ -0.77
USP33-208ENST00000477949 KANK4Q5T7N3 995 aaPredicted RBP10.26□□□□□ -0.77
USP33-208ENST00000477949 RIC3Q7Z5B4 369 aa10.26□□□□□ -0.77
USP33-208ENST00000477949 NPAS3Q8IXF0 933 aa10.26□□□□□ -0.77
USP33-208ENST00000477949 FAM174AQ8TBP5 190 aa10.26□□□□□ -0.77
USP33-208ENST00000477949 ZBTB3Q9H5J0 574 aa10.26□□□□□ -0.77
USP33-208ENST00000477949 CFAP99D6REC4 459 aa10.25□□□□□ -0.77
USP33-208ENST00000477949 NNTQ13423 1086 aa10.25□□□□□ -0.77
USP33-208ENST00000477949 PRPF38BQ5VTL8 546 aaKnown RBP10.25□□□□□ -0.77
USP33-208ENST00000477949 ANKRD30AQ9BXX3 1397 aa10.25□□□□□ -0.77
USP33-208ENST00000477949 PRAG1Q86YV5 1406 aa10.24□□□□□ -0.77
USP33-208ENST00000477949 ZFP42Q96MM3 310 aa10.24□□□□□ -0.77
USP33-208ENST00000477949 DISP2A7MBM2 1401 aa10.23□□□□□ -0.77
USP33-208ENST00000477949 USP32Q8NFA0 1604 aa10.22□□□□□ -0.77
USP33-208ENST00000477949 TNS1Q9HBL0 1735 aaKnown RBP10.22□□□□□ -0.77
USP33-208ENST00000477949 UNC5CLQ8IV45 518 aa10.22□□□□□ -0.77
USP33-208ENST00000477949 SEPT12Q8IYM1 358 aa10.22□□□□□ -0.77
USP33-208ENST00000477949 CDK15Q96Q40 435 aa10.22□□□□□ -0.77
USP33-208ENST00000477949 UTRNP46939 3433 aa10.21□□□□□ -0.77
USP33-208ENST00000477949 F12P00748 615 aaPredicted RBP10.21□□□□□ -0.77
USP33-208ENST00000477949 WDR4P57081 412 aaKnown RBP10.21□□□□□ -0.77
USP33-208ENST00000477949 SF3B2Q13435 895 aaKnown RBP10.21□□□□□ -0.77
USP33-208ENST00000477949 SCARF1Q14162 830 aa10.21□□□□□ -0.77
USP33-208ENST00000477949 IRF7Q92985 503 aa10.21□□□□□ -0.77
USP33-208ENST00000477949 RGPD1P0DJD0 1748 aa10.21□□□□□ -0.78
USP33-208ENST00000477949 ADH1CP00326 375 aa10.2□□□□□ -0.78
USP33-208ENST00000477949 TIMP2P16035 220 aa10.2□□□□□ -0.78
USP33-208ENST00000477949 R3HDM1Q15032 1099 aaKnown RBP10.2□□□□□ -0.78
USP33-208ENST00000477949 PLCH1Q4KWH8 1693 aa10.2□□□□□ -0.78
USP33-208ENST00000477949 MRPL14Q6P1L8 145 aaKnown RBP10.2□□□□□ -0.78
USP33-208ENST00000477949 VPS8Q8N3P4 1428 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms