RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 C9orf131Q5VYM1 1079 aa15.88■□□□□ 0.13
CPSF7-211ENST00000477890 ZBTB1Q9Y2K1 713 aa15.88■□□□□ 0.13
CPSF7-211ENST00000477890 UBR2Q8IWV8 1755 aa15.87■□□□□ 0.13
CPSF7-211ENST00000477890 AFDNP55196 1824 aaKnown RBP15.87■□□□□ 0.13
CPSF7-211ENST00000477890 NARFQ9UHQ1 456 aa15.87■□□□□ 0.13
CPSF7-211ENST00000477890 U2SURPO15042 1029 aaKnown RBP15.86■□□□□ 0.13
CPSF7-211ENST00000477890 VSIG10Q8N0Z9 540 aa15.86■□□□□ 0.13
CPSF7-211ENST00000477890 NMRK2Q9NPI5 230 aa15.86■□□□□ 0.13
CPSF7-211ENST00000477890 COL3A1P02461 1466 aaPredicted RBP15.85■□□□□ 0.13
CPSF7-211ENST00000477890 TOMM70O94826 608 aa15.85■□□□□ 0.13
CPSF7-211ENST00000477890 NFIXQ14938 502 aa15.85■□□□□ 0.13
CPSF7-211ENST00000477890 TTC5Q8N0Z6 440 aa15.85■□□□□ 0.13
CPSF7-211ENST00000477890 CANXP27824 592 aaKnown RBP15.84■□□□□ 0.13
CPSF7-211ENST00000477890 RNF181Q9P0P0 153 aa15.84■□□□□ 0.13
CPSF7-211ENST00000477890 NRXN2Q9P2S2 1712 aa15.84■□□□□ 0.13
CPSF7-211ENST00000477890 NPC1L1Q9UHC9 1359 aa15.84■□□□□ 0.13
CPSF7-211ENST00000477890 SBF1O95248 1867 aa15.84■□□□□ 0.13
CPSF7-211ENST00000477890 SERPINB2P05120 415 aa15.83■□□□□ 0.12
CPSF7-211ENST00000477890 TEFQ10587 303 aa15.83■□□□□ 0.12
CPSF7-211ENST00000477890 BCL2L12Q9HB09 334 aa15.83■□□□□ 0.12
CPSF7-211ENST00000477890 GNAT3A8MTJ3 354 aa15.82■□□□□ 0.12
CPSF7-211ENST00000477890 STARD3NLO95772 234 aa15.82■□□□□ 0.12
CPSF7-211ENST00000477890 APLP1P51693 650 aa15.82■□□□□ 0.12
CPSF7-211ENST00000477890 GAS2L2Q8NHY3 880 aa15.82■□□□□ 0.12
CPSF7-211ENST00000477890 SIPA1L3O60292 1781 aaPredicted RBP15.81■□□□□ 0.12
CPSF7-211ENST00000477890 BICDL1Q6ZP65 573 aa15.81■□□□□ 0.12
CPSF7-211ENST00000477890 C16orf71Q8IYS4 520 aaPredicted RBP15.81■□□□□ 0.12
CPSF7-211ENST00000477890 IL17REQ8NFR9 667 aa15.81■□□□□ 0.12
CPSF7-211ENST00000477890 ZNF496Q96IT1 587 aaPredicted RBP15.81■□□□□ 0.12
CPSF7-211ENST00000477890 DLEC1Q9Y238 1755 aa15.81■□□□□ 0.12
CPSF7-211ENST00000477890 HEG1Q9ULI3 1381 aa15.8■□□□□ 0.12
CPSF7-211ENST00000477890 KDM2BQ8NHM5 1336 aa15.8■□□□□ 0.12
CPSF7-211ENST00000477890 A0A087WZG4 1122 aa15.8■□□□□ 0.12
CPSF7-211ENST00000477890 ZNF790Q6PG37 636 aa15.8■□□□□ 0.12
CPSF7-211ENST00000477890 EIF5P55010 431 aaKnown RBP15.79■□□□□ 0.12
CPSF7-211ENST00000477890 RASSF7Q02833 373 aa15.79■□□□□ 0.12
CPSF7-211ENST00000477890 IFFO2Q5TF58 517 aa15.79■□□□□ 0.12
CPSF7-211ENST00000477890 TEX13AQ9BXU3 409 aaPredicted RBP15.79■□□□□ 0.12
CPSF7-211ENST00000477890 ZNF330Q9Y3S2 320 aaPredicted RBP15.79■□□□□ 0.12
CPSF7-211ENST00000477890 CARMIL3Q8ND23 1372 aa15.78■□□□□ 0.12
CPSF7-211ENST00000477890 C2CD5Q86YS7 1000 aa15.78■□□□□ 0.12
CPSF7-211ENST00000477890 TTLL6Q8N841 843 aa15.78■□□□□ 0.12
CPSF7-211ENST00000477890 RBM46Q8TBY0 533 aaKnown RBP15.78■□□□□ 0.12
CPSF7-211ENST00000477890 TNRC6CQ9HCJ0 1690 aaKnown RBP15.78■□□□□ 0.12
CPSF7-211ENST00000477890 SCN7AQ01118 1682 aa15.77■□□□□ 0.12
CPSF7-211ENST00000477890 H0YIN7 160 aa15.77■□□□□ 0.12
CPSF7-211ENST00000477890 PRKAR2BP31323 418 aa15.77■□□□□ 0.12
CPSF7-211ENST00000477890 TBC1D9BQ66K14 1250 aa15.77■□□□□ 0.12
CPSF7-211ENST00000477890 PHACTR3Q96KR7 559 aa15.77■□□□□ 0.12
CPSF7-211ENST00000477890 CFAP53Q96M91 514 aa15.77■□□□□ 0.12
CPSF7-211ENST00000477890 FMNL2Q96PY5 1086 aa15.77■□□□□ 0.12
CPSF7-211ENST00000477890 RRAGCQ9HB90 399 aa15.77■□□□□ 0.12
CPSF7-211ENST00000477890 TBC1D2BQ9UPU7 963 aa15.77■□□□□ 0.12
CPSF7-211ENST00000477890 CCDC88AQ3V6T2 1871 aa15.76■□□□□ 0.11
CPSF7-211ENST00000477890 WDR90Q96KV7 1748 aa15.76■□□□□ 0.11
CPSF7-211ENST00000477890 ANKRD31Q8N7Z5 1873 aa15.76■□□□□ 0.11
CPSF7-211ENST00000477890 CEMIPQ8WUJ3 1361 aa15.75■□□□□ 0.11
CPSF7-211ENST00000477890 BTBD11A6QL63 1104 aa15.75■□□□□ 0.11
CPSF7-211ENST00000477890 LMNB1P20700 586 aa15.75■□□□□ 0.11
CPSF7-211ENST00000477890 IL6STP40189 918 aaPredicted RBP15.75■□□□□ 0.11
CPSF7-211ENST00000477890 NPM2Q86SE8 214 aaKnown RBP15.75■□□□□ 0.11
CPSF7-211ENST00000477890 RSPH6AQ9H0K4 717 aa15.75■□□□□ 0.11
CPSF7-211ENST00000477890 KCNQ3O43525 872 aa15.74■□□□□ 0.11
CPSF7-211ENST00000477890 A1BGP04217 495 aa15.74■□□□□ 0.11
CPSF7-211ENST00000477890 FSTL1Q12841 308 aa15.74■□□□□ 0.11
CPSF7-211ENST00000477890 DNAJC5GQ8N7S2 189 aa15.74■□□□□ 0.11
CPSF7-211ENST00000477890 ZNF622Q969S3 477 aaKnown RBP eCLIP15.74■□□□□ 0.117e-7■□□□□ 9.5
CPSF7-211ENST00000477890 NUDCQ9Y266 331 aa15.74■□□□□ 0.11
CPSF7-211ENST00000477890 TIAM2Q8IVF5 1701 aa15.74■□□□□ 0.11
CPSF7-211ENST00000477890 ZC3H4Q9UPT8 1303 aaKnown RBP15.73■□□□□ 0.11
CPSF7-211ENST00000477890 PRELPP51888 382 aa15.73■□□□□ 0.11
CPSF7-211ENST00000477890 CCDC24Q8N4L8 307 aa15.73■□□□□ 0.11
CPSF7-211ENST00000477890 COL11A2P13942 1736 aaPredicted RBP15.72■□□□□ 0.11
CPSF7-211ENST00000477890 U2AF1L5P0DN76 240 aaPredicted RBP15.72■□□□□ 0.11
CPSF7-211ENST00000477890 PDE6BP35913 854 aa15.72■□□□□ 0.11
CPSF7-211ENST00000477890 U2AF1Q01081 240 aaKnown RBP eCLIP15.72■□□□□ 0.11
CPSF7-211ENST00000477890 PRR5LQ6MZQ0 368 aa15.72■□□□□ 0.11
CPSF7-211ENST00000477890 BRIP1Q9BX63 1249 aa15.72■□□□□ 0.11
CPSF7-211ENST00000477890 BCORQ6W2J9 1755 aa15.72■□□□□ 0.11
CPSF7-211ENST00000477890 GLTPD2A6NH11 291 aa15.71■□□□□ 0.11
CPSF7-211ENST00000477890 NFKBIEO00221 500 aa15.71■□□□□ 0.11
CPSF7-211ENST00000477890 NPHP1O15259 732 aa15.71■□□□□ 0.11
CPSF7-211ENST00000477890 CAMTA2O94983 1202 aa15.71■□□□□ 0.11
CPSF7-211ENST00000477890 HTRA3P83110 453 aa15.71■□□□□ 0.11
CPSF7-211ENST00000477890 RTF1Q92541 710 aaKnown RBP15.71■□□□□ 0.11
CPSF7-211ENST00000477890 SETDB2Q96T68 719 aa15.71■□□□□ 0.11
CPSF7-211ENST00000477890 ZNF219Q9P2Y4 722 aaPredicted RBP15.71■□□□□ 0.11
CPSF7-211ENST00000477890 PDZRN3Q9UPQ7 1066 aa15.71■□□□□ 0.11
CPSF7-211ENST00000477890 CACNA1SQ13698 1873 aa15.7■□□□□ 0.1
CPSF7-211ENST00000477890 C21orf2O43822 256 aa15.7■□□□□ 0.1
CPSF7-211ENST00000477890 PPP2R1AP30153 589 aa15.7■□□□□ 0.1
CPSF7-211ENST00000477890 PIP4K2AP48426 406 aaPredicted RBP15.7■□□□□ 0.1
CPSF7-211ENST00000477890 MCM10Q7L590 875 aa15.7■□□□□ 0.1
CPSF7-211ENST00000477890 DZIP3Q86Y13 1208 aaKnown RBP15.7■□□□□ 0.1
CPSF7-211ENST00000477890 CNBD1Q8NA66 436 aa15.7■□□□□ 0.1
CPSF7-211ENST00000477890 SMC1BQ8NDV3 1235 aa15.7■□□□□ 0.1
CPSF7-211ENST00000477890 USP16Q9Y5T5 823 aa15.7■□□□□ 0.1
CPSF7-211ENST00000477890 PRAMEF22A3QJZ6 481 aa15.69■□□□□ 0.1
CPSF7-211ENST00000477890 FER1L6Q2WGJ9 1857 aa15.69■□□□□ 0.1
CPSF7-211ENST00000477890 VEGFAP15692 232 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms