RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 SETQ01105 290 aaPredicted RBP15.25■□□□□ 0.03
RTFDC1-207ENST00000477573 ZSCAN23Q3MJ62 389 aa15.25■□□□□ 0.03
RTFDC1-207ENST00000477573 EP400NLQ6ZTU2 488 aa15.25■□□□□ 0.03
RTFDC1-207ENST00000477573 RBM28Q9NW13 759 aaKnown RBP15.25■□□□□ 0.03
RTFDC1-207ENST00000477573 PHF8Q9UPP1 1060 aa15.25■□□□□ 0.03
RTFDC1-207ENST00000477573 RARSP54136 660 aaKnown RBP15.24■□□□□ 0.03
RTFDC1-207ENST00000477573 GOLIM4O00461 696 aa15.24■□□□□ 0.03
RTFDC1-207ENST00000477573 REC8O95072 547 aa15.24■□□□□ 0.03
RTFDC1-207ENST00000477573 CYP2C19P33261 490 aa15.24■□□□□ 0.03
RTFDC1-207ENST00000477573 MUM1L1Q5H9M0 696 aa15.24■□□□□ 0.03
RTFDC1-207ENST00000477573 C22orf23Q9BZE7 217 aa15.24■□□□□ 0.03
RTFDC1-207ENST00000477573 NWD1Q149M9 1564 aa15.23■□□□□ 0.03
RTFDC1-207ENST00000477573 NLRP6P59044 892 aa15.23■□□□□ 0.03
RTFDC1-207ENST00000477573 EIF4A2Q14240 407 aaKnown RBP15.23■□□□□ 0.03
RTFDC1-207ENST00000477573 NBPF11Q86T75 865 aa15.23■□□□□ 0.03
RTFDC1-207ENST00000477573 SBNO1A3KN83 1393 aa15.23■□□□□ 0.03
RTFDC1-207ENST00000477573 PIK3C2AO00443 1686 aa15.22■□□□□ 0.03
RTFDC1-207ENST00000477573 CASQ1P31415 396 aa15.22■□□□□ 0.03
RTFDC1-207ENST00000477573 MED4Q9NPJ6 270 aa15.22■□□□□ 0.03
RTFDC1-207ENST00000477573 SH3BP1Q9Y3L3 701 aa15.22■□□□□ 0.03
RTFDC1-207ENST00000477573 FLT4P35916 1363 aa15.22■□□□□ 0.03
RTFDC1-207ENST00000477573 HNRNPH2P55795 449 aaKnown RBP15.22■□□□□ 0.03
RTFDC1-207ENST00000477573 FAM53CQ9NYF3 392 aa15.22■□□□□ 0.03
RTFDC1-207ENST00000477573 KIF24Q5T7B8 1368 aa15.21■□□□□ 0.03
RTFDC1-207ENST00000477573 KIF18AQ8NI77 898 aa15.21■□□□□ 0.03
RTFDC1-207ENST00000477573 PHACTR3Q96KR7 559 aa15.21■□□□□ 0.03
RTFDC1-207ENST00000477573 USP54Q70EL1 1684 aa15.21■□□□□ 0.02
RTFDC1-207ENST00000477573 ERICH4A6NGS2 130 aa15.21■□□□□ 0.02
RTFDC1-207ENST00000477573 ABTB2Q8N961 1025 aa15.21■□□□□ 0.02
RTFDC1-207ENST00000477573 MAP3K19Q56UN5 1328 aa15.2■□□□□ 0.02
RTFDC1-207ENST00000477573 IRF6O14896 467 aa15.2■□□□□ 0.02
RTFDC1-207ENST00000477573 AMPHP49418 695 aa15.2■□□□□ 0.02
RTFDC1-207ENST00000477573 RIOK3O14730 519 aaKnown RBP15.19■□□□□ 0.02
RTFDC1-207ENST00000477573 NBPF9Q3BBW0 867 aa15.19■□□□□ 0.02
RTFDC1-207ENST00000477573 HSP90AB2PQ58FF8 381 aa15.19■□□□□ 0.02
RTFDC1-207ENST00000477573 ESCO1Q5FWF5 840 aa15.19■□□□□ 0.02
RTFDC1-207ENST00000477573 PROSER2Q86WR7 435 aaPredicted RBP15.19■□□□□ 0.02
RTFDC1-207ENST00000477573 GOLGA6L1Q8N7Z2 621 aa15.19■□□□□ 0.02
RTFDC1-207ENST00000477573 TSR2Q969E8 191 aaKnown RBP15.19■□□□□ 0.02
RTFDC1-207ENST00000477573 PEAK1Q9H792 1746 aa15.19■□□□□ 0.02
RTFDC1-207ENST00000477573 EXOSC9Q06265 439 aaKnown RBP15.19■□□□□ 0.02
RTFDC1-207ENST00000477573 PSME1Q06323 249 aa15.19■□□□□ 0.02
RTFDC1-207ENST00000477573 NCBP1Q09161 790 aaKnown RBP15.19■□□□□ 0.02
RTFDC1-207ENST00000477573 SULT6B1Q6IMI4 303 aa15.19■□□□□ 0.02
RTFDC1-207ENST00000477573 LRSAM1Q6UWE0 723 aa15.19■□□□□ 0.02
RTFDC1-207ENST00000477573 ZNF592Q92610 1267 aa15.19■□□□□ 0.02
RTFDC1-207ENST00000477573 TTC36A6NLP5 189 aa15.18■□□□□ 0.02
RTFDC1-207ENST00000477573 PRIM1P49642 420 aaKnown RBP15.18■□□□□ 0.02
RTFDC1-207ENST00000477573 GNAI1P63096 354 aa15.18■□□□□ 0.02
RTFDC1-207ENST00000477573 RBM33Q96EV2 1170 aaKnown RBP15.18■□□□□ 0.02
RTFDC1-207ENST00000477573 BSDC1Q9NW68 430 aaPredicted RBP15.18■□□□□ 0.02
RTFDC1-207ENST00000477573 ARHGEF10O15013 1369 aa15.18■□□□□ 0.02
RTFDC1-207ENST00000477573 FAM177BA6PVY3 158 aa15.18■□□□□ 0.02
RTFDC1-207ENST00000477573 ZNF428Q96B54 188 aa15.18■□□□□ 0.02
RTFDC1-207ENST00000477573 CALRP27797 417 aaKnown RBP15.17■□□□□ 0.02
RTFDC1-207ENST00000477573 IFT57Q9NWB7 429 aa15.17■□□□□ 0.02
RTFDC1-207ENST00000477573 TDO2P48775 406 aa15.17■□□□□ 0.02
RTFDC1-207ENST00000477573 RNF217Q8TC41 542 aa15.17■□□□□ 0.02
RTFDC1-207ENST00000477573 RGPD1P0DJD0 1748 aa15.16■□□□□ 0.02
RTFDC1-207ENST00000477573 BAG4O95429 457 aaKnown RBP15.16■□□□□ 0.02
RTFDC1-207ENST00000477573 ZNF853P0CG23 659 aa15.16■□□□□ 0.02
RTFDC1-207ENST00000477573 SSR1P43307 286 aaKnown RBP15.16■□□□□ 0.02
RTFDC1-207ENST00000477573 SEMA3FQ13275 785 aa15.16■□□□□ 0.02
RTFDC1-207ENST00000477573 CCDC91Q7Z6B0 441 aa15.16■□□□□ 0.02
RTFDC1-207ENST00000477573 IGHDP01880 384 aa15.15■□□□□ 0.02
RTFDC1-207ENST00000477573 CAVIN1Q6NZI2 390 aaKnown RBP15.15■□□□□ 0.02
RTFDC1-207ENST00000477573 NBPF10Q6P3W6 841 aaKnown RBP15.15■□□□□ 0.02
RTFDC1-207ENST00000477573 C19orf44Q9H6X5 657 aa15.15■□□□□ 0.02
RTFDC1-207ENST00000477573 DLG5Q8TDM6 1919 aa15.15■□□□□ 0.02
RTFDC1-207ENST00000477573 ZKSCAN2Q63HK3 967 aa15.15■□□□□ 0.02
RTFDC1-207ENST00000477573 GSCP56915 257 aaPredicted RBP15.14■□□□□ 0.01
RTFDC1-207ENST00000477573 JRKLQ9Y4A0 524 aa15.14■□□□□ 0.01
RTFDC1-207ENST00000477573 RTL1A6NKG5 1358 aa15.14■□□□□ 0.01
RTFDC1-207ENST00000477573 ALDH1L2Q3SY69 923 aa15.14■□□□□ 0.01
RTFDC1-207ENST00000477573 NUTM2GQ5VZR2 741 aa15.14■□□□□ 0.01
RTFDC1-207ENST00000477573 TXLNBQ8N3L3 684 aa15.14■□□□□ 0.01
RTFDC1-207ENST00000477573 KCNH5Q8NCM2 988 aa15.14■□□□□ 0.01
RTFDC1-207ENST00000477573 TRERF1Q96PN7 1200 aa15.14■□□□□ 0.01
RTFDC1-207ENST00000477573 BCL2L13Q9BXK5 485 aa15.14■□□□□ 0.01
RTFDC1-207ENST00000477573 MARF1Q9Y4F3 1742 aaKnown RBP15.13■□□□□ 0.01
RTFDC1-207ENST00000477573 PANK1Q8TE04 598 aa15.13■□□□□ 0.01
RTFDC1-207ENST00000477573 CFAP44Q96MT7 982 aa15.13■□□□□ 0.01
RTFDC1-207ENST00000477573 CXorf56Q9H5V9 222 aa15.13■□□□□ 0.01
RTFDC1-207ENST00000477573 IPO8O15397 1037 aaKnown RBP15.12■□□□□ 0.01
RTFDC1-207ENST00000477573 TRDNQ13061 729 aa15.12■□□□□ 0.01
RTFDC1-207ENST00000477573 ZKSCAN8Q15776 578 aaPredicted RBP15.12■□□□□ 0.01
RTFDC1-207ENST00000477573 GPATCH11Q8N954 259 aa15.12■□□□□ 0.01
RTFDC1-207ENST00000477573 COG6Q9Y2V7 657 aa15.12■□□□□ 0.01
RTFDC1-207ENST00000477573 KDRP35968 1356 aa15.12■□□□□ 0.01
RTFDC1-207ENST00000477573 MYO1CO00159 1063 aa15.12■□□□□ 0.01
RTFDC1-207ENST00000477573 HOXC9P31274 260 aa15.12■□□□□ 0.01
RTFDC1-207ENST00000477573 CLUAP1Q96AJ1 413 aa15.12■□□□□ 0.01
RTFDC1-207ENST00000477573 NOL10Q9BSC4 688 aaKnown RBP15.12■□□□□ 0.01
RTFDC1-207ENST00000477573 DEF6Q9H4E7 631 aa15.12■□□□□ 0.01
RTFDC1-207ENST00000477573 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.12■□□□□ 0.01
RTFDC1-207ENST00000477573 KIF1AQ12756 1690 aa15.11■□□□□ 0.01
RTFDC1-207ENST00000477573 ATP2B1P20020 1258 aa15.11■□□□□ 0.01
RTFDC1-207ENST00000477573 UVSSAQ2YD98 709 aa15.11■□□□□ 0.01
RTFDC1-207ENST00000477573 SWT1Q5T5J6 900 aaKnown RBP15.11■□□□□ 0.01
RTFDC1-207ENST00000477573 RPAINQ86UA6 219 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms