RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 FSTL1Q12841 308 aa9.11□□□□□ -0.95
RTFDC1-206ENST00000477485 TRIM26Q12899 539 aaPredicted RBP9.11□□□□□ -0.95
RTFDC1-206ENST00000477485 DNAJC10Q8IXB1 793 aa9.11□□□□□ -0.95
RTFDC1-206ENST00000477485 NRXN2Q9P2S2 1712 aa9.11□□□□□ -0.95
RTFDC1-206ENST00000477485 ANKRD31Q8N7Z5 1873 aa9.11□□□□□ -0.95
RTFDC1-206ENST00000477485 UBR2Q8IWV8 1755 aa9.1□□□□□ -0.95
RTFDC1-206ENST00000477485 POLRMTO00411 1230 aaKnown RBP9.1□□□□□ -0.95
RTFDC1-206ENST00000477485 EIF4G2P78344 907 aaKnown RBP eCLIP9.1□□□□□ -0.95
RTFDC1-206ENST00000477485 BICDL1Q6ZP65 573 aa9.1□□□□□ -0.95
RTFDC1-206ENST00000477485 SMC1BQ8NDV3 1235 aa9.1□□□□□ -0.95
RTFDC1-206ENST00000477485 COL11A2P13942 1736 aaPredicted RBP9.1□□□□□ -0.95
RTFDC1-206ENST00000477485 COL15A1P39059 1388 aa9.1□□□□□ -0.95
RTFDC1-206ENST00000477485 HMOX1P09601 288 aa9.09□□□□□ -0.95
RTFDC1-206ENST00000477485 HSPA5P11021 654 aaKnown RBP9.09□□□□□ -0.95
RTFDC1-206ENST00000477485 SLC39A6Q13433 755 aa9.09□□□□□ -0.95
RTFDC1-206ENST00000477485 AKAP4Q5JQC9 854 aa9.09□□□□□ -0.95
RTFDC1-206ENST00000477485 COL13A1Q5TAT6 717 aaPredicted RBP9.09□□□□□ -0.95
RTFDC1-206ENST00000477485 INTS5Q6P9B9 1019 aaKnown RBP9.09□□□□□ -0.95
RTFDC1-206ENST00000477485 TNS4Q8IZW8 715 aa9.09□□□□□ -0.95
RTFDC1-206ENST00000477485 ZNF219Q9P2Y4 722 aaPredicted RBP9.09□□□□□ -0.95
RTFDC1-206ENST00000477485 ZNF330Q9Y3S2 320 aaPredicted RBP9.09□□□□□ -0.95
RTFDC1-206ENST00000477485 KNSTRNQ9Y448 316 aa9.09□□□□□ -0.95
RTFDC1-206ENST00000477485 SCN7AQ01118 1682 aa9.09□□□□□ -0.95
RTFDC1-206ENST00000477485 SOS1Q07889 1333 aaPredicted RBP9.08□□□□□ -0.96
RTFDC1-206ENST00000477485 NPHP1O15259 732 aa9.08□□□□□ -0.96
RTFDC1-206ENST00000477485 LMNB1P20700 586 aa9.08□□□□□ -0.96
RTFDC1-206ENST00000477485 CANXP27824 592 aaKnown RBP9.08□□□□□ -0.96
RTFDC1-206ENST00000477485 CNGB1Q14028 1251 aaPredicted RBP9.08□□□□□ -0.96
RTFDC1-206ENST00000477485 C2CD5Q86YS7 1000 aa9.08□□□□□ -0.96
RTFDC1-206ENST00000477485 TTLL6Q8N841 843 aa9.08□□□□□ -0.96
RTFDC1-206ENST00000477485 SLC52A2Q9HAB3 445 aa9.08□□□□□ -0.96
RTFDC1-206ENST00000477485 LGR6Q9HBX8 967 aa9.08□□□□□ -0.96
RTFDC1-206ENST00000477485 FER1L6Q2WGJ9 1857 aa9.08□□□□□ -0.96
RTFDC1-206ENST00000477485 H0YIN7 160 aa9.07□□□□□ -0.96
RTFDC1-206ENST00000477485 SERPINB2P05120 415 aa9.07□□□□□ -0.96
RTFDC1-206ENST00000477485 CYP19A1P11511 503 aaPredicted RBP9.07□□□□□ -0.96
RTFDC1-206ENST00000477485 TM4SF1P30408 202 aa9.07□□□□□ -0.96
RTFDC1-206ENST00000477485 MAPK8IP2Q13387 824 aaPredicted RBP9.07□□□□□ -0.96
RTFDC1-206ENST00000477485 NFIXQ14938 502 aa9.07□□□□□ -0.96
RTFDC1-206ENST00000477485 TTC5Q8N0Z6 440 aa9.07□□□□□ -0.96
RTFDC1-206ENST00000477485 CNKSR2Q8WXI2 1034 aa9.07□□□□□ -0.96
RTFDC1-206ENST00000477485 ZNF622Q969S3 477 aaKnown RBP eCLIP9.07□□□□□ -0.965e-15■□□□□ 8.1
RTFDC1-206ENST00000477485 NARFQ9UHQ1 456 aa9.07□□□□□ -0.96
RTFDC1-206ENST00000477485 ZBTB1Q9Y2K1 713 aa9.07□□□□□ -0.96
RTFDC1-206ENST00000477485 CARMIL3Q8ND23 1372 aa9.07□□□□□ -0.96
RTFDC1-206ENST00000477485 MRC1P22897 1456 aa9.07□□□□□ -0.96
RTFDC1-206ENST00000477485 RNMTO43148 476 aaKnown RBP9.06□□□□□ -0.96
RTFDC1-206ENST00000477485 VEGFAP15692 232 aaPredicted RBP9.06□□□□□ -0.96
RTFDC1-206ENST00000477485 IL13P35225 146 aa9.06□□□□□ -0.96
RTFDC1-206ENST00000477485 NPM2Q86SE8 214 aaKnown RBP9.06□□□□□ -0.96
RTFDC1-206ENST00000477485 TIMELESSQ9UNS1 1208 aa9.06□□□□□ -0.96
RTFDC1-206ENST00000477485 SIPA1L3O60292 1781 aaPredicted RBP9.06□□□□□ -0.96
RTFDC1-206ENST00000477485 ARFGEF2Q9Y6D5 1785 aa9.06□□□□□ -0.96
RTFDC1-206ENST00000477485 ZC3H4Q9UPT8 1303 aaKnown RBP9.05□□□□□ -0.96
RTFDC1-206ENST00000477485 BCORQ6W2J9 1755 aa9.05□□□□□ -0.96
RTFDC1-206ENST00000477485 GLTPD2A6NH11 291 aa9.05□□□□□ -0.96
RTFDC1-206ENST00000477485 DPY19L2Q6NUT2 758 aa9.05□□□□□ -0.96
RTFDC1-206ENST00000477485 CCDC24Q8N4L8 307 aa9.05□□□□□ -0.96
RTFDC1-206ENST00000477485 JMYQ8N9B5 988 aa9.05□□□□□ -0.96
RTFDC1-206ENST00000477485 SLX4Q8IY92 1834 aa9.04□□□□□ -0.96
RTFDC1-206ENST00000477485 C21orf2O43822 256 aa9.04□□□□□ -0.96
RTFDC1-206ENST00000477485 STARD3NLO95772 234 aa9.04□□□□□ -0.96
RTFDC1-206ENST00000477485 HSPA1AP0DMV8 641 aaKnown RBP9.04□□□□□ -0.96
RTFDC1-206ENST00000477485 HSPA1BP0DMV9 641 aaKnown RBP9.04□□□□□ -0.96
RTFDC1-206ENST00000477485 ERFEQ4G0M1 354 aa9.04□□□□□ -0.96
RTFDC1-206ENST00000477485 A0A087WZG4 1122 aa9.03□□□□□ -0.96
RTFDC1-206ENST00000477485 NFKBIEO00221 500 aa9.03□□□□□ -0.96
RTFDC1-206ENST00000477485 U2SURPO15042 1029 aaKnown RBP9.03□□□□□ -0.96
RTFDC1-206ENST00000477485 PDE6BP35913 854 aa9.03□□□□□ -0.96
RTFDC1-206ENST00000477485 PRELPP51888 382 aa9.03□□□□□ -0.96
RTFDC1-206ENST00000477485 TEFQ10587 303 aa9.03□□□□□ -0.96
RTFDC1-206ENST00000477485 MTHFSDQ2M296 383 aaKnown RBP9.03□□□□□ -0.96
RTFDC1-206ENST00000477485 CC2D1BQ5T0F9 858 aaKnown RBP9.03□□□□□ -0.96
RTFDC1-206ENST00000477485 TBC1D9BQ66K14 1250 aa9.03□□□□□ -0.96
RTFDC1-206ENST00000477485 BCL2L12Q9HB09 334 aa9.03□□□□□ -0.96
RTFDC1-206ENST00000477485 TBC1D2BQ9UPU7 963 aa9.03□□□□□ -0.96
RTFDC1-206ENST00000477485 DIAPH1O60610 1272 aaKnown RBP9.02□□□□□ -0.97
RTFDC1-206ENST00000477485 MKRN1Q9UHC7 482 aaKnown RBP9.02□□□□□ -0.97
RTFDC1-206ENST00000477485 SCN4AP35499 1836 aa9.02□□□□□ -0.97
RTFDC1-206ENST00000477485 ST5P78524 1137 aa9.01□□□□□ -0.97
RTFDC1-206ENST00000477485 VSIG10Q8N0Z9 540 aa9.01□□□□□ -0.97
RTFDC1-206ENST00000477485 CNBD1Q8NA66 436 aa9.01□□□□□ -0.97
RTFDC1-206ENST00000477485 CCER1Q8TC90 406 aaPredicted RBP9.01□□□□□ -0.97
RTFDC1-206ENST00000477485 TAOK3Q9H2K8 898 aa9.01□□□□□ -0.97
RTFDC1-206ENST00000477485 CLSPNQ9HAW4 1339 aa9.01□□□□□ -0.97
RTFDC1-206ENST00000477485 PRR5LQ6MZQ0 368 aa9□□□□□ -0.97
RTFDC1-206ENST00000477485 ZNF496Q96IT1 587 aaPredicted RBP9□□□□□ -0.97
RTFDC1-206ENST00000477485 SETDB2Q96T68 719 aa9□□□□□ -0.97
RTFDC1-206ENST00000477485 HEG1Q9ULI3 1381 aa8.99□□□□□ -0.97
RTFDC1-206ENST00000477485 GNAT3A8MTJ3 354 aa8.99□□□□□ -0.97
RTFDC1-206ENST00000477485 DDNO94850 711 aaPredicted RBP8.99□□□□□ -0.97
RTFDC1-206ENST00000477485 PIP4K2AP48426 406 aaPredicted RBP8.99□□□□□ -0.97
RTFDC1-206ENST00000477485 EIF5P55010 431 aaKnown RBP8.99□□□□□ -0.97
RTFDC1-206ENST00000477485 EAPPQ56P03 285 aaPredicted RBP8.99□□□□□ -0.97
RTFDC1-206ENST00000477485 AMER1Q5JTC6 1135 aaPredicted RBP8.99□□□□□ -0.97
RTFDC1-206ENST00000477485 CHADLQ6NUI6 762 aa8.99□□□□□ -0.97
RTFDC1-206ENST00000477485 ZNF790Q6PG37 636 aa8.99□□□□□ -0.97
RTFDC1-206ENST00000477485 FMNL2Q96PY5 1086 aa8.99□□□□□ -0.97
RTFDC1-206ENST00000477485 BRIP1Q9BX63 1249 aa8.99□□□□□ -0.97
RTFDC1-206ENST00000477485 TEX13AQ9BXU3 409 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms