RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 ZNF530Q6P9A1 599 aaPredicted RBP13.55□□□□□ -0.24
COL4A5-204ENST00000477429 PIM2Q9P1W9 311 aa13.55□□□□□ -0.24
COL4A5-204ENST00000477429 TM4SF1P30408 202 aa13.54□□□□□ -0.24
COL4A5-204ENST00000477429 CABP4P57796 275 aa13.54□□□□□ -0.24
COL4A5-204ENST00000477429 DALRD3Q5D0E6 543 aaKnown RBP13.54□□□□□ -0.24
COL4A5-204ENST00000477429 NFATC2IPQ8NCF5 419 aa13.54□□□□□ -0.24
COL4A5-204ENST00000477429 TNRC6CQ9HCJ0 1690 aaKnown RBP13.53□□□□□ -0.24
COL4A5-204ENST00000477429 CUL9Q8IWT3 2517 aa13.53□□□□□ -0.24
COL4A5-204ENST00000477429 HSPA8P11142 646 aaKnown RBP13.53□□□□□ -0.24
COL4A5-204ENST00000477429 SBF1O95248 1867 aa13.53□□□□□ -0.24
COL4A5-204ENST00000477429 CDCA8Q53HL2 280 aa13.52□□□□□ -0.25
COL4A5-204ENST00000477429 PRPF38BQ5VTL8 546 aaKnown RBP13.52□□□□□ -0.25
COL4A5-204ENST00000477429 USPL1Q5W0Q7 1092 aa13.52□□□□□ -0.25
COL4A5-204ENST00000477429 CFAP44Q96MT7 982 aa13.52□□□□□ -0.25
COL4A5-204ENST00000477429 PLEKHG2Q9H7P9 1386 aa13.52□□□□□ -0.25
COL4A5-204ENST00000477429 CARMIL3Q8ND23 1372 aa13.51□□□□□ -0.25
COL4A5-204ENST00000477429 POTECB2RU33 542 aa13.51□□□□□ -0.25
COL4A5-204ENST00000477429 MTHFSP49914 203 aa13.51□□□□□ -0.25
COL4A5-204ENST00000477429 PLEKHO1Q53GL0 409 aaPredicted RBP13.51□□□□□ -0.25
COL4A5-204ENST00000477429 DNAJC10Q8IXB1 793 aa13.51□□□□□ -0.25
COL4A5-204ENST00000477429 BCL2L12Q9HB09 334 aa13.51□□□□□ -0.25
COL4A5-204ENST00000477429 AIDAQ96BJ3 306 aa13.5□□□□□ -0.25
COL4A5-204ENST00000477429 POLR3GLQ9BT43 218 aa13.5□□□□□ -0.25
COL4A5-204ENST00000477429 LGR6Q9HBX8 967 aa13.5□□□□□ -0.25
COL4A5-204ENST00000477429 SOS1Q07889 1333 aaPredicted RBP13.49□□□□□ -0.25
COL4A5-204ENST00000477429 KDM2BQ8NHM5 1336 aa13.49□□□□□ -0.25
COL4A5-204ENST00000477429 DLL1O00548 723 aa13.49□□□□□ -0.25
COL4A5-204ENST00000477429 SLC39A6Q13433 755 aa13.49□□□□□ -0.25
COL4A5-204ENST00000477429 NFIXQ14938 502 aa13.49□□□□□ -0.25
COL4A5-204ENST00000477429 WBP1LQ9NX94 342 aa13.49□□□□□ -0.25
COL4A5-204ENST00000477429 VIRMAQ69YN4 1812 aaKnown RBP13.48□□□□□ -0.25
COL4A5-204ENST00000477429 NFKBIEO00221 500 aa13.48□□□□□ -0.25
COL4A5-204ENST00000477429 HSP90AB1P08238 724 aaKnown RBP13.48□□□□□ -0.25
COL4A5-204ENST00000477429 CYP19A1P11511 503 aaPredicted RBP13.48□□□□□ -0.25
COL4A5-204ENST00000477429 AFDNP55196 1824 aaKnown RBP13.48□□□□□ -0.25
COL4A5-204ENST00000477429 SULT6B1Q6IMI4 303 aa13.47□□□□□ -0.25
COL4A5-204ENST00000477429 PANK3Q9H999 370 aa13.47□□□□□ -0.25
COL4A5-204ENST00000477429 IL13P35225 146 aa13.46□□□□□ -0.25
COL4A5-204ENST00000477429 AMOTQ4VCS5 1084 aa13.46□□□□□ -0.25
COL4A5-204ENST00000477429 ZBTB1Q9Y2K1 713 aa13.46□□□□□ -0.25
COL4A5-204ENST00000477429 NRXN2Q9P2S2 1712 aa13.46□□□□□ -0.25
COL4A5-204ENST00000477429 A0A0C4DFX4 3053 aa13.46□□□□□ -0.25
COL4A5-204ENST00000477429 CNTNAP1P78357 1384 aa13.45□□□□□ -0.26
COL4A5-204ENST00000477429 GLTPD2A6NH11 291 aa13.45□□□□□ -0.26
COL4A5-204ENST00000477429 POTEIP0CG38 1075 aa13.45□□□□□ -0.26
COL4A5-204ENST00000477429 POTEJP0CG39 1038 aa13.45□□□□□ -0.26
COL4A5-204ENST00000477429 CCDC24Q8N4L8 307 aa13.45□□□□□ -0.26
COL4A5-204ENST00000477429 SCN11AQ9UI33 1791 aa13.45□□□□□ -0.26
COL4A5-204ENST00000477429 SERPINB2P05120 415 aa13.44□□□□□ -0.26
COL4A5-204ENST00000477429 LMNB1P20700 586 aa13.44□□□□□ -0.26
COL4A5-204ENST00000477429 C1orf141Q5JVX7 400 aa13.44□□□□□ -0.26
COL4A5-204ENST00000477429 SLC52A2Q9HAB3 445 aa13.44□□□□□ -0.26
COL4A5-204ENST00000477429 COL15A1P39059 1388 aa13.44□□□□□ -0.26
COL4A5-204ENST00000477429 DLEC1Q9Y238 1755 aa13.43□□□□□ -0.26
COL4A5-204ENST00000477429 TIAM2Q8IVF5 1701 aa13.43□□□□□ -0.26
COL4A5-204ENST00000477429 CREBZFQ9NS37 354 aa13.43□□□□□ -0.26
COL4A5-204ENST00000477429 NARFQ9UHQ1 456 aa13.43□□□□□ -0.26
COL4A5-204ENST00000477429 MRC1P22897 1456 aa13.42□□□□□ -0.26
COL4A5-204ENST00000477429 RNMTO43148 476 aaKnown RBP13.42□□□□□ -0.26
COL4A5-204ENST00000477429 ZPR1O75312 459 aa13.42□□□□□ -0.26
COL4A5-204ENST00000477429 VEGFAP15692 232 aaPredicted RBP13.42□□□□□ -0.26
COL4A5-204ENST00000477429 VEGFBP49765 207 aa13.42□□□□□ -0.26
COL4A5-204ENST00000477429 BICDL1Q6ZP65 573 aa13.42□□□□□ -0.26
COL4A5-204ENST00000477429 C2CD5Q86YS7 1000 aa13.42□□□□□ -0.26
COL4A5-204ENST00000477429 TTLL6Q8N841 843 aa13.42□□□□□ -0.26
COL4A5-204ENST00000477429 RTN4Q9NQC3 1192 aaKnown RBP13.42□□□□□ -0.26
COL4A5-204ENST00000477429 ZNF219Q9P2Y4 722 aaPredicted RBP13.42□□□□□ -0.26
COL4A5-204ENST00000477429 ANKRD31Q8N7Z5 1873 aa13.41□□□□□ -0.26
COL4A5-204ENST00000477429 CCDC88AQ3V6T2 1871 aa13.4□□□□□ -0.26
COL4A5-204ENST00000477429 COL11A2P13942 1736 aaPredicted RBP13.4□□□□□ -0.26
COL4A5-204ENST00000477429 HMOX1P09601 288 aa13.4□□□□□ -0.26
COL4A5-204ENST00000477429 HSPA5P11021 654 aaKnown RBP13.4□□□□□ -0.26
COL4A5-204ENST00000477429 CANXP27824 592 aaKnown RBP13.4□□□□□ -0.26
COL4A5-204ENST00000477429 AKAP4Q5JQC9 854 aa13.4□□□□□ -0.26
COL4A5-204ENST00000477429 TBC1D9BQ66K14 1250 aa13.4□□□□□ -0.26
COL4A5-204ENST00000477429 MORC1Q86VD1 984 aa13.4□□□□□ -0.26
COL4A5-204ENST00000477429 C21orf2O43822 256 aa13.39□□□□□ -0.27
COL4A5-204ENST00000477429 MTHFSDQ2M296 383 aaKnown RBP13.39□□□□□ -0.27
COL4A5-204ENST00000477429 ZC3H4Q9UPT8 1303 aaKnown RBP13.39□□□□□ -0.27
COL4A5-204ENST00000477429 MCOLN1Q9GZU1 580 aa13.38□□□□□ -0.27
COL4A5-204ENST00000477429 DDNO94850 711 aaPredicted RBP13.37□□□□□ -0.27
COL4A5-204ENST00000477429 EIF5P55010 431 aaKnown RBP13.37□□□□□ -0.27
COL4A5-204ENST00000477429 PRR5LQ6MZQ0 368 aa13.37□□□□□ -0.27
COL4A5-204ENST00000477429 UBR2Q8IWV8 1755 aa13.36□□□□□ -0.27
COL4A5-204ENST00000477429 H0YIN7 160 aa13.36□□□□□ -0.27
COL4A5-204ENST00000477429 AMER1Q5JTC6 1135 aaPredicted RBP13.36□□□□□ -0.27
COL4A5-204ENST00000477429 HABP4Q5JVS0 413 aaKnown RBP13.36□□□□□ -0.27
COL4A5-204ENST00000477429 ZNF622Q969S3 477 aaKnown RBP eCLIP13.36□□□□□ -0.27
COL4A5-204ENST00000477429 TBC1D2BQ9UPU7 963 aa13.36□□□□□ -0.27
COL4A5-204ENST00000477429 SLC4A2P04920 1241 aa13.35□□□□□ -0.27
COL4A5-204ENST00000477429 ERFEQ4G0M1 354 aa13.35□□□□□ -0.27
COL4A5-204ENST00000477429 ZNF496Q96IT1 587 aaPredicted RBP13.35□□□□□ -0.27
COL4A5-204ENST00000477429 FER1L6Q2WGJ9 1857 aa13.35□□□□□ -0.27
COL4A5-204ENST00000477429 SLX4Q8IY92 1834 aa13.34□□□□□ -0.27
COL4A5-204ENST00000477429 KCNQ3O43525 872 aa13.34□□□□□ -0.27
COL4A5-204ENST00000477429 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
COL4A5-204ENST00000477429 SOX10P56693 466 aa13.34□□□□□ -0.27
COL4A5-204ENST00000477429 A1BGP04217 495 aa13.33□□□□□ -0.28
COL4A5-204ENST00000477429 PIP4K2AP48426 406 aaPredicted RBP13.33□□□□□ -0.28
COL4A5-204ENST00000477429 CHADLQ6NUI6 762 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms