RNA–Protein interactions for RNA: ENST00000477393.1

RNF7-204, Transcript of ring finger protein 7, humanhuman

TSL 2

Gene RNF7, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7-204ENST00000477393 RNMTO43148 476 aaKnown RBP20.58■□□□□ 0.89
RNF7-204ENST00000477393 WDR90Q96KV7 1748 aa20.58■□□□□ 0.88
RNF7-204ENST00000477393 KCPQ6ZWJ8 1503 aa20.58■□□□□ 0.88
RNF7-204ENST00000477393 NRXN2Q9P2S2 1712 aa20.56■□□□□ 0.88
RNF7-204ENST00000477393 AFDNP55196 1824 aaKnown RBP20.56■□□□□ 0.88
RNF7-204ENST00000477393 SLC39A6Q13433 755 aa20.56■□□□□ 0.88
RNF7-204ENST00000477393 NFIXQ14938 502 aa20.56■□□□□ 0.88
RNF7-204ENST00000477393 VSIG10Q8N0Z9 540 aa20.56■□□□□ 0.88
RNF7-204ENST00000477393 ZC3H4Q9UPT8 1303 aaKnown RBP20.55■□□□□ 0.88
RNF7-204ENST00000477393 VIRMAQ69YN4 1812 aaKnown RBP20.55■□□□□ 0.88
RNF7-204ENST00000477393 RRAGCQ9HB90 399 aa20.55■□□□□ 0.88
RNF7-204ENST00000477393 COL15A1P39059 1388 aa20.55■□□□□ 0.88
RNF7-204ENST00000477393 TNRC6CQ9HCJ0 1690 aaKnown RBP20.54■□□□□ 0.88
RNF7-204ENST00000477393 KLRG1Q96E93 195 aa20.54■□□□□ 0.88
RNF7-204ENST00000477393 ZBTB1Q9Y2K1 713 aa20.54■□□□□ 0.88
RNF7-204ENST00000477393 HMOX1P09601 288 aa20.53■□□□□ 0.88
RNF7-204ENST00000477393 MTHFSDQ2M296 383 aaKnown RBP20.53■□□□□ 0.88
RNF7-204ENST00000477393 JMYQ8N9B5 988 aa20.53■□□□□ 0.88
RNF7-204ENST00000477393 BCL2L12Q9HB09 334 aa20.53■□□□□ 0.88
RNF7-204ENST00000477393 SERPINB2P05120 415 aa20.52■□□□□ 0.88
RNF7-204ENST00000477393 DLEC1Q9Y238 1755 aa20.51■□□□□ 0.87
RNF7-204ENST00000477393 LMNB1P20700 586 aa20.51■□□□□ 0.87
RNF7-204ENST00000477393 TTLL6Q8N841 843 aa20.51■□□□□ 0.87
RNF7-204ENST00000477393 UBR2Q8IWV8 1755 aa20.5■□□□□ 0.87
RNF7-204ENST00000477393 PER1O15534 1290 aaPredicted RBP20.5■□□□□ 0.87
RNF7-204ENST00000477393 HTRA3P83110 453 aa20.5■□□□□ 0.87
RNF7-204ENST00000477393 GLTPD2A6NH11 291 aa20.49■□□□□ 0.87
RNF7-204ENST00000477393 DIAPH1O60610 1272 aaKnown RBP20.49■□□□□ 0.87
RNF7-204ENST00000477393 PRELPP51888 382 aa20.49■□□□□ 0.87
RNF7-204ENST00000477393 EIF5P55010 431 aaKnown RBP20.49■□□□□ 0.87
RNF7-204ENST00000477393 RASSF7Q02833 373 aa20.49■□□□□ 0.87
RNF7-204ENST00000477393 SMC1BQ8NDV3 1235 aa20.49■□□□□ 0.87
RNF7-204ENST00000477393 STARD3NLO95772 234 aa20.48■□□□□ 0.87
RNF7-204ENST00000477393 H0YIN7 160 aa20.47■□□□□ 0.87
RNF7-204ENST00000477393 C2CD5Q86YS7 1000 aa20.47■□□□□ 0.87
RNF7-204ENST00000477393 KIF7Q2M1P5 1343 aa20.47■□□□□ 0.87
RNF7-204ENST00000477393 A0A087WZG4 1122 aa20.46■□□□□ 0.87
RNF7-204ENST00000477393 VEGFAP15692 232 aaPredicted RBP20.46■□□□□ 0.87
RNF7-204ENST00000477393 CANXP27824 592 aaKnown RBP20.46■□□□□ 0.87
RNF7-204ENST00000477393 PDZRN3Q9UPQ7 1066 aa20.46■□□□□ 0.87
RNF7-204ENST00000477393 TTC5Q8N0Z6 440 aa20.45■□□□□ 0.86
RNF7-204ENST00000477393 TEX13AQ9BXU3 409 aaPredicted RBP20.45■□□□□ 0.86
RNF7-204ENST00000477393 CCDC88AQ3V6T2 1871 aa20.45■□□□□ 0.86
RNF7-204ENST00000477393 CARMIL3Q8ND23 1372 aa20.45■□□□□ 0.86
RNF7-204ENST00000477393 NFKBIEO00221 500 aa20.44■□□□□ 0.86
RNF7-204ENST00000477393 ZNF790Q6PG37 636 aa20.43■□□□□ 0.86
RNF7-204ENST00000477393 IL17REQ8NFR9 667 aa20.43■□□□□ 0.86
RNF7-204ENST00000477393 ZNF496Q96IT1 587 aaPredicted RBP20.43■□□□□ 0.86
RNF7-204ENST00000477393 BRIP1Q9BX63 1249 aa20.43■□□□□ 0.86
RNF7-204ENST00000477393 TBC1D9BQ66K14 1250 aa20.42■□□□□ 0.86
RNF7-204ENST00000477393 BICDL1Q6ZP65 573 aa20.42■□□□□ 0.86
RNF7-204ENST00000477393 HEG1Q9ULI3 1381 aa20.42■□□□□ 0.86
RNF7-204ENST00000477393 GNAT3A8MTJ3 354 aa20.41■□□□□ 0.86
RNF7-204ENST00000477393 PDE6BP35913 854 aa20.41■□□□□ 0.86
RNF7-204ENST00000477393 IL6STP40189 918 aaPredicted RBP20.41■□□□□ 0.86
RNF7-204ENST00000477393 COL13A1Q5TAT6 717 aaPredicted RBP20.41■□□□□ 0.86
RNF7-204ENST00000477393 ANKRD31Q8N7Z5 1873 aa20.41■□□□□ 0.86
RNF7-204ENST00000477393 POTECB2RU33 542 aa20.4■□□□□ 0.86
RNF7-204ENST00000477393 COL3A1P02461 1466 aaPredicted RBP20.4■□□□□ 0.86
RNF7-204ENST00000477393 TEFQ10587 303 aa20.4■□□□□ 0.86
RNF7-204ENST00000477393 CC2D1BQ5T0F9 858 aaKnown RBP20.4■□□□□ 0.86
RNF7-204ENST00000477393 TIAM2Q8IVF5 1701 aa20.4■□□□□ 0.86
RNF7-204ENST00000477393 GAS2L2Q8NHY3 880 aa20.4■□□□□ 0.86
RNF7-204ENST00000477393 CCER1Q8TC90 406 aaPredicted RBP20.4■□□□□ 0.86
RNF7-204ENST00000477393 NPC1L1Q9UHC9 1359 aa20.4■□□□□ 0.86
RNF7-204ENST00000477393 SIPA1L3O60292 1781 aaPredicted RBP20.39■□□□□ 0.86
RNF7-204ENST00000477393 PRR5LQ6MZQ0 368 aa20.39■□□□□ 0.85
RNF7-204ENST00000477393 DPY19L2Q6NUT2 758 aa20.39■□□□□ 0.85
RNF7-204ENST00000477393 SCN7AQ01118 1682 aa20.38■□□□□ 0.85
RNF7-204ENST00000477393 PCNTO95613 3336 aa20.38■□□□□ 0.85
RNF7-204ENST00000477393 DICER1Q9UPY3 1922 aaKnown RBP20.38■□□□□ 0.85
RNF7-204ENST00000477393 ZNF622Q969S3 477 aaKnown RBP eCLIP20.38■□□□□ 0.85
RNF7-204ENST00000477393 TBC1D2BQ9UPU7 963 aa20.38■□□□□ 0.85
RNF7-204ENST00000477393 FER1L6Q2WGJ9 1857 aa20.38■□□□□ 0.85
RNF7-204ENST00000477393 C21orf2O43822 256 aa20.37■□□□□ 0.85
RNF7-204ENST00000477393 FMNL2Q96PY5 1086 aa20.37■□□□□ 0.85
RNF7-204ENST00000477393 CEMIPQ8WUJ3 1361 aa20.36■□□□□ 0.85
RNF7-204ENST00000477393 LTBP3Q9NS15 1303 aa20.36■□□□□ 0.85
RNF7-204ENST00000477393 U2SURPO15042 1029 aaKnown RBP20.35■□□□□ 0.85
RNF7-204ENST00000477393 CAMTA2O94983 1202 aa20.35■□□□□ 0.85
RNF7-204ENST00000477393 ERFEQ4G0M1 354 aa20.35■□□□□ 0.85
RNF7-204ENST00000477393 COL11A2P13942 1736 aaPredicted RBP20.35■□□□□ 0.85
RNF7-204ENST00000477393 A1BGP04217 495 aa20.34■□□□□ 0.85
RNF7-204ENST00000477393 CNKSR1Q969H4 720 aa20.34■□□□□ 0.85
RNF7-204ENST00000477393 SETDB2Q96T68 719 aa20.34■□□□□ 0.85
RNF7-204ENST00000477393 STYK1Q6J9G0 422 aa20.33■□□□□ 0.85
RNF7-204ENST00000477393 NPM2Q86SE8 214 aaKnown RBP20.33■□□□□ 0.85
RNF7-204ENST00000477393 CCDC24Q8N4L8 307 aa20.33■□□□□ 0.85
RNF7-204ENST00000477393 ZNF330Q9Y3S2 320 aaPredicted RBP20.33■□□□□ 0.85
RNF7-204ENST00000477393 SRGNP10124 158 aa20.32■□□□□ 0.84
RNF7-204ENST00000477393 CNBD1Q8NA66 436 aa20.32■□□□□ 0.84
RNF7-204ENST00000477393 BTBD11A6QL63 1104 aa20.31■□□□□ 0.84
RNF7-204ENST00000477393 SOGA3Q5TF21 947 aa20.31■□□□□ 0.84
RNF7-204ENST00000477393 CLEC4GQ6UXB4 293 aa20.31■□□□□ 0.84
RNF7-204ENST00000477393 PHACTR3Q96KR7 559 aa20.31■□□□□ 0.84
RNF7-204ENST00000477393 TAOK3Q9H2K8 898 aa20.31■□□□□ 0.84
RNF7-204ENST00000477393 ZNF219Q9P2Y4 722 aaPredicted RBP20.31■□□□□ 0.84
RNF7-204ENST00000477393 SLX4Q8IY92 1834 aa20.31■□□□□ 0.84
RNF7-204ENST00000477393 KCNQ3O43525 872 aa20.3■□□□□ 0.84
RNF7-204ENST00000477393 ST5P78524 1137 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms