RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 KRTAP4-8A0A0G2JLE6 195 aa7.45□□□□□ -1.22
XRN1-211ENST00000477237 MYCP01106 439 aaPredicted RBP7.45□□□□□ -1.22
XRN1-211ENST00000477237 MAPTP10636 758 aaKnown RBP7.45□□□□□ -1.22
XRN1-211ENST00000477237 ATP4AP20648 1035 aa7.45□□□□□ -1.22
XRN1-211ENST00000477237 PLA2G4AP47712 749 aa7.45□□□□□ -1.22
XRN1-211ENST00000477237 PCBP4P57723 403 aaKnown RBP7.45□□□□□ -1.22
XRN1-211ENST00000477237 TNP2Q05952 138 aa7.45□□□□□ -1.22
XRN1-211ENST00000477237 FAM182BQ5T319 152 aa7.45□□□□□ -1.22
XRN1-211ENST00000477237 TBC1D9Q6ZT07 1266 aa7.45□□□□□ -1.22
XRN1-211ENST00000477237 NLRP8Q86W28 1048 aa7.45□□□□□ -1.22
XRN1-211ENST00000477237 CCDC85AQ96PX6 553 aaPredicted RBP7.45□□□□□ -1.22
XRN1-211ENST00000477237 KDM4CQ9H3R0 1056 aa7.45□□□□□ -1.22
XRN1-211ENST00000477237 AVENQ9NQS1 362 aaPredicted RBP7.45□□□□□ -1.22
XRN1-211ENST00000477237 DCDC2BA2VCK2 349 aa7.44□□□□□ -1.22
XRN1-211ENST00000477237 ETNK1Q9HBU6 452 aa7.44□□□□□ -1.22
XRN1-211ENST00000477237 ESCO1Q5FWF5 840 aa7.43□□□□□ -1.22
XRN1-211ENST00000477237 APBA3O96018 575 aa7.42□□□□□ -1.22
XRN1-211ENST00000477237 TLR1Q15399 786 aa7.42□□□□□ -1.22
XRN1-211ENST00000477237 ZNF468Q5VIY5 522 aaPredicted RBP7.42□□□□□ -1.22
XRN1-211ENST00000477237 ZNF592Q92610 1267 aa7.42□□□□□ -1.22
XRN1-211ENST00000477237 FAM229AH3BQW9 127 aa7.41□□□□□ -1.22
XRN1-211ENST00000477237 KHNYNO15037 678 aaKnown RBP7.41□□□□□ -1.22
XRN1-211ENST00000477237 TMEM259Q4ZIN3 620 aa7.41□□□□□ -1.22
XRN1-211ENST00000477237 PRRT3Q5FWE3 981 aa7.41□□□□□ -1.22
XRN1-211ENST00000477237 ZNF330Q9Y3S2 320 aaPredicted RBP7.41□□□□□ -1.22
XRN1-211ENST00000477237 A0A1W2PNR3 127 aa7.4□□□□□ -1.22
XRN1-211ENST00000477237 GPR37L1O60883 481 aa7.4□□□□□ -1.22
XRN1-211ENST00000477237 C1orf216Q8TAB5 229 aa7.4□□□□□ -1.22
XRN1-211ENST00000477237 AIDAQ96BJ3 306 aa7.4□□□□□ -1.22
XRN1-211ENST00000477237 GOLGA2P5Q9HBQ8 144 aa7.4□□□□□ -1.22
XRN1-211ENST00000477237 CEP126Q9P2H0 1117 aa7.4□□□□□ -1.22
XRN1-211ENST00000477237 PRR12Q9ULL5 1215 aa7.4□□□□□ -1.22
XRN1-211ENST00000477237 ELOA3CA0A087WX78 387 aaPredicted RBP7.39□□□□□ -1.23
XRN1-211ENST00000477237 SPDYE3A6NKU9 549 aa7.39□□□□□ -1.23
XRN1-211ENST00000477237 ELOA3DA6NLF2 546 aaPredicted RBP7.39□□□□□ -1.23
XRN1-211ENST00000477237 COL9A3Q14050 684 aaPredicted RBP7.39□□□□□ -1.23
XRN1-211ENST00000477237 LRP8Q14114 963 aa7.39□□□□□ -1.23
XRN1-211ENST00000477237 TSGA10IPQ3SY00 556 aa7.39□□□□□ -1.23
XRN1-211ENST00000477237 ELOA3BQ3SY89 546 aa7.39□□□□□ -1.23
XRN1-211ENST00000477237 ELOA3Q8NG57 546 aa7.39□□□□□ -1.23
XRN1-211ENST00000477237 STRN4Q9NRL3 753 aa7.39□□□□□ -1.23
XRN1-211ENST00000477237 MDFIQ99750 246 aa7.38□□□□□ -1.23
XRN1-211ENST00000477237 HYAL3O43820 417 aaPredicted RBP7.37□□□□□ -1.23
XRN1-211ENST00000477237 ARSJQ5FYB0 599 aaPredicted RBP7.37□□□□□ -1.23
XRN1-211ENST00000477237 FAM157BP0CG42 384 aa7.36□□□□□ -1.23
XRN1-211ENST00000477237 GRIK4Q16099 956 aa7.36□□□□□ -1.23
XRN1-211ENST00000477237 NIFKQ9BYG3 293 aaKnown RBP7.36□□□□□ -1.23
XRN1-211ENST00000477237 ALAS2P22557 587 aa7.35□□□□□ -1.23
XRN1-211ENST00000477237 SCNN1DP51172 638 aa7.35□□□□□ -1.23
XRN1-211ENST00000477237 SYT9Q86SS6 491 aa7.35□□□□□ -1.23
XRN1-211ENST00000477237 NACC1Q96RE7 527 aa7.35□□□□□ -1.23
XRN1-211ENST00000477237 ZIC5Q96T25 663 aa7.35□□□□□ -1.23
XRN1-211ENST00000477237 MARK1Q9P0L2 795 aa7.35□□□□□ -1.23
XRN1-211ENST00000477237 M0R082 166 aa7.34□□□□□ -1.23
XRN1-211ENST00000477237 EFSO43281 561 aa7.34□□□□□ -1.23
XRN1-211ENST00000477237 H2AFB1P0C5Y9 115 aa7.34□□□□□ -1.23
XRN1-211ENST00000477237 H2AFB2P0C5Z0 115 aa7.34□□□□□ -1.23
XRN1-211ENST00000477237 USP4Q13107 963 aa7.34□□□□□ -1.23
XRN1-211ENST00000477237 TRIM28Q13263 835 aaKnown RBP7.34□□□□□ -1.23
XRN1-211ENST00000477237 C8orf86Q6ZUL3 223 aa7.34□□□□□ -1.23
XRN1-211ENST00000477237 ZNF295-AS1Q8N0V1 137 aa7.34□□□□□ -1.23
XRN1-211ENST00000477237 ZNF417Q8TAU3 575 aa7.34□□□□□ -1.23
XRN1-211ENST00000477237 ZNF587Q96SQ5 575 aaPredicted RBP7.34□□□□□ -1.23
XRN1-211ENST00000477237 STARD13Q9Y3M8 1113 aa7.34□□□□□ -1.23
XRN1-211ENST00000477237 INHAP05111 366 aa7.33□□□□□ -1.24
XRN1-211ENST00000477237 DOLKQ9UPQ8 538 aa7.33□□□□□ -1.24
XRN1-211ENST00000477237 GDF10P55107 478 aa7.32□□□□□ -1.24
XRN1-211ENST00000477237 SAMD5Q5TGI4 173 aa7.32□□□□□ -1.24
XRN1-211ENST00000477237 PHTF2Q8N3S3 785 aa7.32□□□□□ -1.24
XRN1-211ENST00000477237 PCMTD1Q96MG8 357 aaPredicted RBP7.32□□□□□ -1.24
XRN1-211ENST00000477237 PRDM6Q9NQX0 595 aa7.32□□□□□ -1.24
XRN1-211ENST00000477237 ADARB2-AS1A8MUL3 147 aa7.31□□□□□ -1.24
XRN1-211ENST00000477237 ALBP02768 609 aa7.31□□□□□ -1.24
XRN1-211ENST00000477237 SMTNP53814 917 aa7.31□□□□□ -1.24
XRN1-211ENST00000477237 LAMC2Q13753 1193 aa7.31□□□□□ -1.24
XRN1-211ENST00000477237 NBPF1Q3BBV0 1214 aa7.31□□□□□ -1.24
XRN1-211ENST00000477237 MICALL1Q8N3F8 863 aa7.31□□□□□ -1.24
XRN1-211ENST00000477237 GJA3Q9Y6H8 435 aa7.31□□□□□ -1.24
XRN1-211ENST00000477237 SIN3BO75182 1162 aa7.3□□□□□ -1.24
XRN1-211ENST00000477237 NID1P14543 1247 aa7.3□□□□□ -1.24
XRN1-211ENST00000477237 TATP17735 454 aaPredicted RBP7.3□□□□□ -1.24
XRN1-211ENST00000477237 ADGRE1Q14246 886 aa7.3□□□□□ -1.24
XRN1-211ENST00000477237 MBTPS1Q14703 1052 aa7.3□□□□□ -1.24
XRN1-211ENST00000477237 OXLD1Q5BKU9 147 aa7.3□□□□□ -1.24
XRN1-211ENST00000477237 ZDHHC3Q9NYG2 299 aa7.3□□□□□ -1.24
XRN1-211ENST00000477237 USP3Q9Y6I4 520 aa7.3□□□□□ -1.24
XRN1-211ENST00000477237 NDUFB9Q9Y6M9 179 aa7.3□□□□□ -1.24
XRN1-211ENST00000477237 SELPP16109 830 aa7.29□□□□□ -1.24
XRN1-211ENST00000477237 GOPCQ9HD26 462 aa7.29□□□□□ -1.24
XRN1-211ENST00000477237 IQSEC3Q9UPP2 1182 aaPredicted RBP7.29□□□□□ -1.24
XRN1-211ENST00000477237 C9orf172C9J069 976 aa7.28□□□□□ -1.24
XRN1-211ENST00000477237 SERTAD1Q9UHV2 236 aa7.28□□□□□ -1.24
XRN1-211ENST00000477237 MCTP1Q6DN14 999 aa7.27□□□□□ -1.25
XRN1-211ENST00000477237 MTMR14Q8NCE2 650 aa7.27□□□□□ -1.25
XRN1-211ENST00000477237 TNFRSF25Q93038 417 aa7.27□□□□□ -1.25
XRN1-211ENST00000477237 CDK2AP1O14519 115 aa7.26□□□□□ -1.25
XRN1-211ENST00000477237 BICDL1Q6ZP65 573 aa7.26□□□□□ -1.25
XRN1-211ENST00000477237 TXNRD3Q86VQ6 643 aa7.26□□□□□ -1.25
XRN1-211ENST00000477237 SIRT1Q96EB6 747 aa7.26□□□□□ -1.25
XRN1-211ENST00000477237 SLC30A3Q99726 388 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms