RNA–Protein interactions for RNA: ENST00000476652.2

CEP78-208, Transcript of centrosomal protein 78, human

TSL 3

Gene CEP78, Length 634 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEP78-208	ENST00000476652	IL17RE	Q8NFR9	667 aa		28.46	■■■□□ 2.15
CEP78-208	ENST00000476652	POLRMT	O00411	1230 aa	Known RBP	28.45	■■■□□ 2.14
CEP78-208	ENST00000476652	KCNA3	P22001	575 aa		28.45	■■■□□ 2.14
CEP78-208	ENST00000476652	TM4SF1	P30408	202 aa		28.45	■■■□□ 2.14
CEP78-208	ENST00000476652	TTC5	Q8N0Z6	440 aa		28.45	■■■□□ 2.14
CEP78-208	ENST00000476652	CFAP53	Q96M91	514 aa		28.45	■■■□□ 2.14
CEP78-208	ENST00000476652	FCHSD2	O94868	740 aa		28.44	■■■□□ 2.14
CEP78-208	ENST00000476652	TEF	Q10587	303 aa		28.44	■■■□□ 2.14
CEP78-208	ENST00000476652	DLEC1	Q9Y238	1755 aa		28.43	■■■□□ 2.14
CEP78-208	ENST00000476652	NARF	Q9UHQ1	456 aa		28.43	■■■□□ 2.14
CEP78-208	ENST00000476652	PRKAR2B	P31323	418 aa		28.42	■■■□□ 2.14
CEP78-208	ENST00000476652	RSPH6A	Q9H0K4	717 aa		28.42	■■■□□ 2.14
CEP78-208	ENST00000476652	SCN7A	Q01118	1682 aa		28.42	■■■□□ 2.14
CEP78-208	ENST00000476652	ZNF496	Q96IT1	587 aa	Predicted RBP	28.41	■■■□□ 2.14
CEP78-208	ENST00000476652	PHACTR3	Q96KR7	559 aa		28.41	■■■□□ 2.14
CEP78-208	ENST00000476652	CEMIP	Q8WUJ3	1361 aa		28.4	■■■□□ 2.14
CEP78-208	ENST00000476652	HEG1	Q9ULI3	1381 aa		28.4	■■■□□ 2.14
CEP78-208	ENST00000476652	CANX	P27824	592 aa	Known RBP	28.4	■■■□□ 2.14
CEP78-208	ENST00000476652	PPP2R1A	P30153	589 aa		28.4	■■■□□ 2.14
CEP78-208	ENST00000476652	ZNF790	Q6PG37	636 aa		28.4	■■■□□ 2.14
CEP78-208	ENST00000476652	ARHGAP27	Q6ZUM4	889 aa		28.4	■■■□□ 2.14
CEP78-208	ENST00000476652	PIM2	Q9P1W9	311 aa		28.4	■■■□□ 2.14
CEP78-208	ENST00000476652	SBF1	O95248	1867 aa		28.4	■■■□□ 2.14
CEP78-208	ENST00000476652	NFIX	Q14938	502 aa		28.39	■■■□□ 2.14
CEP78-208	ENST00000476652	STARD3NL	O95772	234 aa		28.38	■■■□□ 2.13
CEP78-208	ENST00000476652	CHRNA5	P30532	468 aa		28.38	■■■□□ 2.13
CEP78-208	ENST00000476652	BCL2L12	Q9HB09	334 aa		28.38	■■■□□ 2.13
CEP78-208	ENST00000476652	NUDC	Q9Y266	331 aa		28.38	■■■□□ 2.13
CEP78-208	ENST00000476652	DLG5	Q8TDM6	1919 aa		28.35	■■■□□ 2.13
CEP78-208	ENST00000476652	EIF5	P55010	431 aa	Known RBP	28.35	■■■□□ 2.13
CEP78-208	ENST00000476652	DALRD3	Q5D0E6	543 aa	Known RBP	28.35	■■■□□ 2.13
CEP78-208	ENST00000476652	ANKRD31	Q8N7Z5	1873 aa		28.34	■■■□□ 2.13
CEP78-208	ENST00000476652	U2AF1L5	P0DN76	240 aa	Predicted RBP	28.34	■■■□□ 2.13
CEP78-208	ENST00000476652	U2AF1	Q01081	240 aa	Known RBP eCLIP	28.34	■■■□□ 2.13
CEP78-208	ENST00000476652	BCOR	Q6W2J9	1755 aa		28.34	■■■□□ 2.13
CEP78-208	ENST00000476652	CEP350	Q5VT06	3117 aa		28.33	■■■□□ 2.13
CEP78-208	ENST00000476652	TEX13A	Q9BXU3	409 aa	Predicted RBP	28.33	■■■□□ 2.13
CEP78-208	ENST00000476652	FMNL2	Q96PY5	1086 aa		28.32	■■■□□ 2.12
CEP78-208	ENST00000476652		A0A087WZG4	1122 aa		28.31	■■■□□ 2.12
CEP78-208	ENST00000476652	KIF3C	O14782	793 aa		28.31	■■■□□ 2.12
CEP78-208	ENST00000476652	KCNQ3	O43525	872 aa		28.31	■■■□□ 2.12
CEP78-208	ENST00000476652	SERPINB2	P05120	415 aa		28.31	■■■□□ 2.12
CEP78-208	ENST00000476652	CCDC88A	Q3V6T2	1871 aa		28.31	■■■□□ 2.12
CEP78-208	ENST00000476652	BTBD11	A6QL63	1104 aa		28.3	■■■□□ 2.12
CEP78-208	ENST00000476652	ZNF330	Q9Y3S2	320 aa	Predicted RBP	28.29	■■■□□ 2.12
CEP78-208	ENST00000476652	CARMIL3	Q8ND23	1372 aa		28.28	■■■□□ 2.12
CEP78-208	ENST00000476652	C9orf131	Q5VYM1	1079 aa		28.28	■■■□□ 2.12
CEP78-208	ENST00000476652	BICDL1	Q6ZP65	573 aa		28.28	■■■□□ 2.12
CEP78-208	ENST00000476652	IL6ST	P40189	918 aa	Predicted RBP	28.27	■■■□□ 2.12
CEP78-208	ENST00000476652	COL11A2	P13942	1736 aa	Predicted RBP	28.26	■■■□□ 2.12
CEP78-208	ENST00000476652	A1BG	P04217	495 aa		28.26	■■■□□ 2.11
CEP78-208	ENST00000476652	MCM10	Q7L590	875 aa		28.26	■■■□□ 2.11
CEP78-208	ENST00000476652	RTF1	Q92541	710 aa	Known RBP	28.26	■■■□□ 2.11
CEP78-208	ENST00000476652	TBC1D2B	Q9UPU7	963 aa		28.26	■■■□□ 2.11
CEP78-208	ENST00000476652	CACNA1S	Q13698	1873 aa		28.25	■■■□□ 2.11
CEP78-208	ENST00000476652	TBC1D9B	Q66K14	1250 aa		28.25	■■■□□ 2.11
CEP78-208	ENST00000476652	HSPA6	P17066	643 aa		28.23	■■■□□ 2.11
CEP78-208	ENST00000476652	DCTN1	Q14203	1278 aa		28.23	■■■□□ 2.11
CEP78-208	ENST00000476652	LAMB4	A4D0S4	1761 aa		28.23	■■■□□ 2.11
CEP78-208	ENST00000476652	RNF181	Q9P0P0	153 aa		28.22	■■■□□ 2.11
CEP78-208	ENST00000476652	C2CD5	Q86YS7	1000 aa		28.21	■■■□□ 2.11
CEP78-208	ENST00000476652	NMRK2	Q9NPI5	230 aa		28.21	■■■□□ 2.11
CEP78-208	ENST00000476652	USP16	Q9Y5T5	823 aa		28.21	■■■□□ 2.11
CEP78-208	ENST00000476652	TNRC6C	Q9HCJ0	1690 aa	Known RBP	28.21	■■■□□ 2.11
CEP78-208	ENST00000476652	KDM3B	Q7LBC6	1761 aa		28.21	■■■□□ 2.11
CEP78-208	ENST00000476652	TIAM2	Q8IVF5	1701 aa		28.21	■■■□□ 2.11
CEP78-208	ENST00000476652	PRAMEF22	A3QJZ6	481 aa		28.2	■■■□□ 2.1
CEP78-208	ENST00000476652	NPM2	Q86SE8	214 aa	Known RBP	28.2	■■■□□ 2.1
CEP78-208	ENST00000476652	HTATSF1	O43719	755 aa	Known RBP	28.19	■■■□□ 2.1
CEP78-208	ENST00000476652	CAMTA2	O94983	1202 aa		28.19	■■■□□ 2.1
CEP78-208	ENST00000476652	PIP4K2A	P48426	406 aa	Predicted RBP	28.19	■■■□□ 2.1
CEP78-208	ENST00000476652		H0YIN7	160 aa		28.18	■■■□□ 2.1
CEP78-208	ENST00000476652	RASSF7	Q02833	373 aa		28.18	■■■□□ 2.1
CEP78-208	ENST00000476652	TTLL6	Q8N841	843 aa		28.18	■■■□□ 2.1
CEP78-208	ENST00000476652	SNRPA1	P09661	255 aa	Known RBP	28.17	■■■□□ 2.1
CEP78-208	ENST00000476652	PRR5L	Q6MZQ0	368 aa		28.17	■■■□□ 2.1
CEP78-208	ENST00000476652	DZIP3	Q86Y13	1208 aa	Known RBP	28.17	■■■□□ 2.1
CEP78-208	ENST00000476652	FER1L6	Q2WGJ9	1857 aa		28.17	■■■□□ 2.1
CEP78-208	ENST00000476652	ARFGEF2	Q9Y6D5	1785 aa		28.16	■■■□□ 2.1
CEP78-208	ENST00000476652	TOMM70	O94826	608 aa		28.16	■■■□□ 2.1
CEP78-208	ENST00000476652	CCDC24	Q8N4L8	307 aa		28.16	■■■□□ 2.1
CEP78-208	ENST00000476652	DICER1	Q9UPY3	1922 aa	Known RBP	28.16	■■■□□ 2.1
CEP78-208	ENST00000476652	SETDB2	Q96T68	719 aa		28.14	■■■□□ 2.1
CEP78-208	ENST00000476652	BRIP1	Q9BX63	1249 aa		28.14	■■■□□ 2.1
CEP78-208	ENST00000476652	TAF7	Q15545	349 aa	Predicted RBP	28.13	■■■□□ 2.09
CEP78-208	ENST00000476652	KDM2B	Q8NHM5	1336 aa		28.13	■■■□□ 2.09
CEP78-208	ENST00000476652	SLX4	Q8IY92	1834 aa		28.13	■■■□□ 2.09
CEP78-208	ENST00000476652	NEFM	P07197	916 aa		28.12	■■■□□ 2.09
CEP78-208	ENST00000476652	PDE6B	P35913	854 aa		28.12	■■■□□ 2.09
CEP78-208	ENST00000476652	PRELP	P51888	382 aa		28.11	■■■□□ 2.09
CEP78-208	ENST00000476652	CNBD1	Q8NA66	436 aa		28.11	■■■□□ 2.09
CEP78-208	ENST00000476652	ZNF622	Q969S3	477 aa	Known RBP eCLIP	28.11	■■■□□ 2.09	1e-7	■■■■□ 23.3
CEP78-208	ENST00000476652	PLEKHF1	Q96S99	279 aa		28.11	■■■□□ 2.09
CEP78-208	ENST00000476652	PDZRN3	Q9UPQ7	1066 aa		28.11	■■■□□ 2.09
CEP78-208	ENST00000476652	LMNB1	P20700	586 aa		28.1	■■■□□ 2.09
CEP78-208	ENST00000476652	MIS18A	Q9NYP9	233 aa		28.1	■■■□□ 2.09
CEP78-208	ENST00000476652	NBPF26	B4DH59	902 aa		28.09	■■■□□ 2.09
CEP78-208	ENST00000476652	NBPF10	Q6P3W6	841 aa	Known RBP	28.09	■■■□□ 2.09
CEP78-208	ENST00000476652	NBPF15	Q8N660	670 aa		28.09	■■■□□ 2.09
CEP78-208	ENST00000476652	ZC3H4	Q9UPT8	1303 aa	Known RBP	28.09	■■■□□ 2.09

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms