RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 IL13P35225 146 aa16.43■□□□□ 0.22
HDAC6-219ENST00000476625 AMOTQ4VCS5 1084 aa16.43■□□□□ 0.22
HDAC6-219ENST00000476625 DALRD3Q5D0E6 543 aaKnown RBP16.43■□□□□ 0.22
HDAC6-219ENST00000476625 HMOX1P09601 288 aa16.42■□□□□ 0.22
HDAC6-219ENST00000476625 TM4SF1P30408 202 aa16.42■□□□□ 0.22
HDAC6-219ENST00000476625 SOS1Q07889 1333 aaPredicted RBP16.42■□□□□ 0.22
HDAC6-219ENST00000476625 BCL2L12Q9HB09 334 aa16.41■□□□□ 0.22
HDAC6-219ENST00000476625 ZBTB1Q9Y2K1 713 aa16.41■□□□□ 0.22
HDAC6-219ENST00000476625 NFIXQ14938 502 aa16.4■□□□□ 0.22
HDAC6-219ENST00000476625 RBM46Q8TBY0 533 aaKnown RBP16.4■□□□□ 0.22
HDAC6-219ENST00000476625 COL15A1P39059 1388 aa16.39■□□□□ 0.21
HDAC6-219ENST00000476625 SIPA1L3O60292 1781 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-219ENST00000476625 CYP19A1P11511 503 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-219ENST00000476625 COL13A1Q5TAT6 717 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-219ENST00000476625 C16orf71Q8IYS4 520 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-219ENST00000476625 SLC52A2Q9HAB3 445 aa16.39■□□□□ 0.21
HDAC6-219ENST00000476625 SCN7AQ01118 1682 aa16.39■□□□□ 0.21
HDAC6-219ENST00000476625 EIF4G2P78344 907 aaKnown RBP eCLIP16.38■□□□□ 0.21
HDAC6-219ENST00000476625 CCDC24Q8N4L8 307 aa16.38■□□□□ 0.21
HDAC6-219ENST00000476625 RNMTO43148 476 aaKnown RBP16.37■□□□□ 0.21
HDAC6-219ENST00000476625 AKAP4Q5JQC9 854 aa16.37■□□□□ 0.21
HDAC6-219ENST00000476625 KLRG1Q96E93 195 aa16.37■□□□□ 0.21
HDAC6-219ENST00000476625 ZPR1O75312 459 aa16.36■□□□□ 0.21
HDAC6-219ENST00000476625 CAPN15O75808 1086 aa16.36■□□□□ 0.21
HDAC6-219ENST00000476625 MTHFSDQ2M296 383 aaKnown RBP16.36■□□□□ 0.21
HDAC6-219ENST00000476625 BICDL1Q6ZP65 573 aa16.36■□□□□ 0.21
HDAC6-219ENST00000476625 ZNF219Q9P2Y4 722 aaPredicted RBP16.36■□□□□ 0.21
HDAC6-219ENST00000476625 KDM2BQ8NHM5 1336 aa16.36■□□□□ 0.21
HDAC6-219ENST00000476625 CANXP27824 592 aaKnown RBP16.35■□□□□ 0.21
HDAC6-219ENST00000476625 CNGB1Q14028 1251 aaPredicted RBP16.35■□□□□ 0.21
HDAC6-219ENST00000476625 FER1L6Q2WGJ9 1857 aa16.34■□□□□ 0.21
HDAC6-219ENST00000476625 SERPINB2P05120 415 aa16.34■□□□□ 0.21
HDAC6-219ENST00000476625 AMER1Q5JTC6 1135 aaPredicted RBP16.34■□□□□ 0.21
HDAC6-219ENST00000476625 NARFQ9UHQ1 456 aa16.34■□□□□ 0.21
HDAC6-219ENST00000476625 TIMELESSQ9UNS1 1208 aa16.34■□□□□ 0.21
HDAC6-219ENST00000476625 DICER1Q9UPY3 1922 aaKnown RBP16.34■□□□□ 0.21
HDAC6-219ENST00000476625 BCORQ6W2J9 1755 aa16.33■□□□□ 0.21
HDAC6-219ENST00000476625 NFKBIEO00221 500 aa16.33■□□□□ 0.2
HDAC6-219ENST00000476625 C2CD5Q86YS7 1000 aa16.33■□□□□ 0.2
HDAC6-219ENST00000476625 COL3A1P02461 1466 aaPredicted RBP16.32■□□□□ 0.2
HDAC6-219ENST00000476625 FSTL1Q12841 308 aa16.32■□□□□ 0.2
HDAC6-219ENST00000476625 SLX4Q8IY92 1834 aa16.32■□□□□ 0.2
HDAC6-219ENST00000476625 JMYQ8N9B5 988 aa16.32■□□□□ 0.2
HDAC6-219ENST00000476625 KNSTRNQ9Y448 316 aa16.32■□□□□ 0.2
HDAC6-219ENST00000476625 POTECB2RU33 542 aa16.31■□□□□ 0.2
HDAC6-219ENST00000476625 TBC1D9BQ66K14 1250 aa16.31■□□□□ 0.2
HDAC6-219ENST00000476625 KIF7Q2M1P5 1343 aa16.3■□□□□ 0.2
HDAC6-219ENST00000476625 CC2D1BQ5T0F9 858 aaKnown RBP16.3■□□□□ 0.2
HDAC6-219ENST00000476625 ZNF330Q9Y3S2 320 aaPredicted RBP16.3■□□□□ 0.2
HDAC6-219ENST00000476625 ARFGEF2Q9Y6D5 1785 aa16.3■□□□□ 0.2
HDAC6-219ENST00000476625 SMC1BQ8NDV3 1235 aa16.29■□□□□ 0.2
HDAC6-219ENST00000476625 GLTPD2A6NH11 291 aa16.28■□□□□ 0.2
HDAC6-219ENST00000476625 LMNB1P20700 586 aa16.28■□□□□ 0.2
HDAC6-219ENST00000476625 PIP4K2AP48426 406 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-219ENST00000476625 TTLL6Q8N841 843 aa16.28■□□□□ 0.2
HDAC6-219ENST00000476625 ZNF496Q96IT1 587 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-219ENST00000476625 TBC1D2BQ9UPU7 963 aa16.28■□□□□ 0.2
HDAC6-219ENST00000476625 KCNQ3O43525 872 aa16.27■□□□□ 0.2
HDAC6-219ENST00000476625 C21orf2O43822 256 aa16.27■□□□□ 0.2
HDAC6-219ENST00000476625 POTEIP0CG38 1075 aa16.27■□□□□ 0.2
HDAC6-219ENST00000476625 POTEJP0CG39 1038 aa16.27■□□□□ 0.2
HDAC6-219ENST00000476625 ZNF622Q969S3 477 aaKnown RBP eCLIP16.27■□□□□ 0.21e-7■□□□□ 10.9
HDAC6-219ENST00000476625 EIF5P55010 431 aaKnown RBP16.26■□□□□ 0.19
HDAC6-219ENST00000476625 IL17REQ8NFR9 667 aa16.26■□□□□ 0.19
HDAC6-219ENST00000476625 CLSPNQ9HAW4 1339 aa16.25■□□□□ 0.19
HDAC6-219ENST00000476625 H0YIN7 160 aa16.25■□□□□ 0.19
HDAC6-219ENST00000476625 DIAPH1O60610 1272 aaKnown RBP16.25■□□□□ 0.19
HDAC6-219ENST00000476625 HSPA1AP0DMV8 641 aaKnown RBP16.25■□□□□ 0.19
HDAC6-219ENST00000476625 HSPA1BP0DMV9 641 aaKnown RBP16.25■□□□□ 0.19
HDAC6-219ENST00000476625 PRR5LQ6MZQ0 368 aa16.25■□□□□ 0.19
HDAC6-219ENST00000476625 HEG1Q9ULI3 1381 aa16.25■□□□□ 0.19
HDAC6-219ENST00000476625 PRAMEF22A3QJZ6 481 aa16.24■□□□□ 0.19
HDAC6-219ENST00000476625 A1BGP04217 495 aa16.24■□□□□ 0.19
HDAC6-219ENST00000476625 VEGFAP15692 232 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-219ENST00000476625 VSIG10Q8N0Z9 540 aa16.24■□□□□ 0.19
HDAC6-219ENST00000476625 U2SURPO15042 1029 aaKnown RBP16.23■□□□□ 0.19
HDAC6-219ENST00000476625 PER1O15534 1290 aaPredicted RBP16.23■□□□□ 0.19
HDAC6-219ENST00000476625 TNS4Q8IZW8 715 aa16.23■□□□□ 0.19
HDAC6-219ENST00000476625 TTC5Q8N0Z6 440 aa16.23■□□□□ 0.19
HDAC6-219ENST00000476625 ZC3H4Q9UPT8 1303 aaKnown RBP16.22■□□□□ 0.19
HDAC6-219ENST00000476625 ZNF790Q6PG37 636 aa16.21■□□□□ 0.19
HDAC6-219ENST00000476625 DDNO94850 711 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-219ENST00000476625 CAMTA2O94983 1202 aa16.2■□□□□ 0.18
HDAC6-219ENST00000476625 ERFEQ4G0M1 354 aa16.2■□□□□ 0.18
HDAC6-219ENST00000476625 OLFM4Q6UX06 510 aa16.2■□□□□ 0.18
HDAC6-219ENST00000476625 PHACTR3Q96KR7 559 aa16.2■□□□□ 0.18
HDAC6-219ENST00000476625 PCNTO95613 3336 aa16.2■□□□□ 0.18
HDAC6-219ENST00000476625 STARD3NLO95772 234 aa16.19■□□□□ 0.18
HDAC6-219ENST00000476625 TEFQ10587 303 aa16.19■□□□□ 0.18
HDAC6-219ENST00000476625 CCER1Q8TC90 406 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-219ENST00000476625 BRIP1Q9BX63 1249 aa16.19■□□□□ 0.18
HDAC6-219ENST00000476625 MKRN1Q9UHC7 482 aaKnown RBP16.19■□□□□ 0.18
HDAC6-219ENST00000476625 GNAT3A8MTJ3 354 aa16.18■□□□□ 0.18
HDAC6-219ENST00000476625 PRPF40BQ6NWY9 871 aaKnown RBP16.18■□□□□ 0.18
HDAC6-219ENST00000476625 USP16Q9Y5T5 823 aa16.18■□□□□ 0.18
HDAC6-219ENST00000476625 A0A087WZG4 1122 aa16.17■□□□□ 0.18
HDAC6-219ENST00000476625 PDE6BP35913 854 aa16.17■□□□□ 0.18
HDAC6-219ENST00000476625 SLC51AQ86UW1 340 aa16.17■□□□□ 0.18
HDAC6-219ENST00000476625 CNBD1Q8NA66 436 aa16.17■□□□□ 0.18
HDAC6-219ENST00000476625 LAMB4A4D0S4 1761 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms