RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 NMRK2Q9NPI5 230 aa16.71■□□□□ 0.27
TTC38-206ENST00000475467 COL15A1P39059 1388 aa16.7■□□□□ 0.26
TTC38-206ENST00000475467 USPL1Q5W0Q7 1092 aa16.7■□□□□ 0.26
TTC38-206ENST00000475467 TTC5Q8N0Z6 440 aa16.7■□□□□ 0.26
TTC38-206ENST00000475467 DNAJC5GQ8N7S2 189 aa16.7■□□□□ 0.26
TTC38-206ENST00000475467 CCER1Q8TC90 406 aaPredicted RBP16.7■□□□□ 0.26
TTC38-206ENST00000475467 LGR6Q9HBX8 967 aa16.7■□□□□ 0.26
TTC38-206ENST00000475467 RNF181Q9P0P0 153 aa16.7■□□□□ 0.26
TTC38-206ENST00000475467 NPC1L1Q9UHC9 1359 aa16.69■□□□□ 0.26
TTC38-206ENST00000475467 SERPINB2P05120 415 aa16.68■□□□□ 0.26
TTC38-206ENST00000475467 LMNB1P20700 586 aa16.68■□□□□ 0.26
TTC38-206ENST00000475467 NFIXQ14938 502 aa16.68■□□□□ 0.26
TTC38-206ENST00000475467 MTHFSDQ2M296 383 aaKnown RBP16.68■□□□□ 0.26
TTC38-206ENST00000475467 TTLL6Q8N841 843 aa16.68■□□□□ 0.26
TTC38-206ENST00000475467 GAS2L2Q8NHY3 880 aa16.68■□□□□ 0.26
TTC38-206ENST00000475467 ADAMTS7Q9UKP4 1686 aa16.68■□□□□ 0.26
TTC38-206ENST00000475467 H0YIN7 160 aa16.67■□□□□ 0.26
TTC38-206ENST00000475467 PER1O15534 1290 aaPredicted RBP16.67■□□□□ 0.26
TTC38-206ENST00000475467 CHRNA5P30532 468 aa16.67■□□□□ 0.26
TTC38-206ENST00000475467 NPM2Q86SE8 214 aaKnown RBP16.67■□□□□ 0.26
TTC38-206ENST00000475467 SMC1BQ8NDV3 1235 aa16.67■□□□□ 0.26
TTC38-206ENST00000475467 SBF1O95248 1867 aa16.66■□□□□ 0.26
TTC38-206ENST00000475467 HMOX1P09601 288 aa16.66■□□□□ 0.26
TTC38-206ENST00000475467 ZBTB1Q9Y2K1 713 aa16.66■□□□□ 0.26
TTC38-206ENST00000475467 KIF7Q2M1P5 1343 aa16.66■□□□□ 0.26
TTC38-206ENST00000475467 TNRC6CQ9HCJ0 1690 aaKnown RBP16.65■□□□□ 0.26
TTC38-206ENST00000475467 KCPQ6ZWJ8 1503 aa16.65■□□□□ 0.26
TTC38-206ENST00000475467 NRXN2Q9P2S2 1712 aa16.65■□□□□ 0.26
TTC38-206ENST00000475467 VEGFAP15692 232 aaPredicted RBP16.65■□□□□ 0.26
TTC38-206ENST00000475467 EIF5P55010 431 aaKnown RBP16.65■□□□□ 0.26
TTC38-206ENST00000475467 TEFQ10587 303 aa16.65■□□□□ 0.26
TTC38-206ENST00000475467 SLC39A6Q13433 755 aa16.65■□□□□ 0.26
TTC38-206ENST00000475467 KLRG1Q96E93 195 aa16.65■□□□□ 0.26
TTC38-206ENST00000475467 GLTPD2A6NH11 291 aa16.64■□□□□ 0.25
TTC38-206ENST00000475467 GNAT3A8MTJ3 354 aa16.64■□□□□ 0.25
TTC38-206ENST00000475467 PDE6BP35913 854 aa16.64■□□□□ 0.25
TTC38-206ENST00000475467 IL6STP40189 918 aaPredicted RBP16.64■□□□□ 0.25
TTC38-206ENST00000475467 DPY19L2Q6NUT2 758 aa16.64■□□□□ 0.25
TTC38-206ENST00000475467 JMYQ8N9B5 988 aa16.64■□□□□ 0.25
TTC38-206ENST00000475467 RRAGCQ9HB90 399 aa16.64■□□□□ 0.25
TTC38-206ENST00000475467 ZNF790Q6PG37 636 aa16.63■□□□□ 0.25
TTC38-206ENST00000475467 BRIP1Q9BX63 1249 aa16.63■□□□□ 0.25
TTC38-206ENST00000475467 VIRMAQ69YN4 1812 aaKnown RBP16.63■□□□□ 0.25
TTC38-206ENST00000475467 WDR90Q96KV7 1748 aa16.62■□□□□ 0.25
TTC38-206ENST00000475467 UBR2Q8IWV8 1755 aa16.62■□□□□ 0.25
TTC38-206ENST00000475467 AFDNP55196 1824 aaKnown RBP16.62■□□□□ 0.25
TTC38-206ENST00000475467 CANXP27824 592 aaKnown RBP16.62■□□□□ 0.25
TTC38-206ENST00000475467 C2CD5Q86YS7 1000 aa16.62■□□□□ 0.25
TTC38-206ENST00000475467 BCL2L12Q9HB09 334 aa16.62■□□□□ 0.25
TTC38-206ENST00000475467 HEG1Q9ULI3 1381 aa16.62■□□□□ 0.25
TTC38-206ENST00000475467 SOGA3Q5TF21 947 aa16.61■□□□□ 0.25
TTC38-206ENST00000475467 FMNL2Q96PY5 1086 aa16.61■□□□□ 0.25
TTC38-206ENST00000475467 DLEC1Q9Y238 1755 aa16.61■□□□□ 0.25
TTC38-206ENST00000475467 RGL2O15211 777 aa16.6■□□□□ 0.25
TTC38-206ENST00000475467 CC2D1BQ5T0F9 858 aaKnown RBP16.6■□□□□ 0.25
TTC38-206ENST00000475467 CFAP53Q96M91 514 aa16.6■□□□□ 0.25
TTC38-206ENST00000475467 CARMIL3Q8ND23 1372 aa16.6■□□□□ 0.25
TTC38-206ENST00000475467 CNKSR1Q969H4 720 aa16.59■□□□□ 0.25
TTC38-206ENST00000475467 ZNF496Q96IT1 587 aaPredicted RBP16.59■□□□□ 0.25
TTC38-206ENST00000475467 NUDCQ9Y266 331 aa16.59■□□□□ 0.25
TTC38-206ENST00000475467 U2SURPO15042 1029 aaKnown RBP16.58■□□□□ 0.24
TTC38-206ENST00000475467 CLEC4GQ6UXB4 293 aa16.58■□□□□ 0.24
TTC38-206ENST00000475467 IL17REQ8NFR9 667 aa16.58■□□□□ 0.24
TTC38-206ENST00000475467 SETDB2Q96T68 719 aa16.58■□□□□ 0.24
TTC38-206ENST00000475467 LTBP3Q9NS15 1303 aa16.58■□□□□ 0.24
TTC38-206ENST00000475467 CEMIPQ8WUJ3 1361 aa16.57■□□□□ 0.24
TTC38-206ENST00000475467 ST5P78524 1137 aa16.56■□□□□ 0.24
TTC38-206ENST00000475467 RASSF7Q02833 373 aa16.56■□□□□ 0.24
TTC38-206ENST00000475467 ZNF652Q9Y2D9 606 aa16.56■□□□□ 0.24
TTC38-206ENST00000475467 BTBD11A6QL63 1104 aa16.55■□□□□ 0.24
TTC38-206ENST00000475467 NFKBIEO00221 500 aa16.55■□□□□ 0.24
TTC38-206ENST00000475467 NPHP1O15259 732 aa16.55■□□□□ 0.24
TTC38-206ENST00000475467 TBC1D9BQ66K14 1250 aa16.55■□□□□ 0.24
TTC38-206ENST00000475467 STYK1Q6J9G0 422 aa16.55■□□□□ 0.24
TTC38-206ENST00000475467 PRR5LQ6MZQ0 368 aa16.55■□□□□ 0.24
TTC38-206ENST00000475467 BICDL1Q6ZP65 573 aa16.55■□□□□ 0.24
TTC38-206ENST00000475467 CNBD1Q8NA66 436 aa16.55■□□□□ 0.24
TTC38-206ENST00000475467 ZNF622Q969S3 477 aaKnown RBP eCLIP16.55■□□□□ 0.24
TTC38-206ENST00000475467 COL3A1P02461 1466 aaPredicted RBP16.54■□□□□ 0.24
TTC38-206ENST00000475467 HTATSF1O43719 755 aaKnown RBP16.54■□□□□ 0.24
TTC38-206ENST00000475467 ERFEQ4G0M1 354 aa16.54■□□□□ 0.24
TTC38-206ENST00000475467 TAOK3Q9H2K8 898 aa16.54■□□□□ 0.24
TTC38-206ENST00000475467 TBC1D2BQ9UPU7 963 aa16.54■□□□□ 0.24
TTC38-206ENST00000475467 RTF1Q92541 710 aaKnown RBP16.53■□□□□ 0.24
TTC38-206ENST00000475467 MASTLQ96GX5 879 aa16.53■□□□□ 0.24
TTC38-206ENST00000475467 SIPA1L3O60292 1781 aaPredicted RBP16.52■□□□□ 0.24
TTC38-206ENST00000475467 CAMTA2O94983 1202 aa16.52■□□□□ 0.24
TTC38-206ENST00000475467 SNRPA1P09661 255 aaKnown RBP16.52■□□□□ 0.24
TTC38-206ENST00000475467 ZNF330Q9Y3S2 320 aaPredicted RBP16.52■□□□□ 0.24
TTC38-206ENST00000475467 DICER1Q9UPY3 1922 aaKnown RBP16.52■□□□□ 0.23
TTC38-206ENST00000475467 SCN7AQ01118 1682 aa16.52■□□□□ 0.23
TTC38-206ENST00000475467 CCDC88AQ3V6T2 1871 aa16.52■□□□□ 0.23
TTC38-206ENST00000475467 IQCA1LA6NCM1 817 aa16.51■□□□□ 0.23
TTC38-206ENST00000475467 C21orf2O43822 256 aa16.51■□□□□ 0.23
TTC38-206ENST00000475467 SRGNP10124 158 aa16.51■□□□□ 0.23
TTC38-206ENST00000475467 DZIP3Q86Y13 1208 aaKnown RBP16.51■□□□□ 0.23
TTC38-206ENST00000475467 FER1L6Q2WGJ9 1857 aa16.5■□□□□ 0.23
TTC38-206ENST00000475467 A1BGP04217 495 aa16.5■□□□□ 0.23
TTC38-206ENST00000475467 PRKAR2BP31323 418 aa16.5■□□□□ 0.23
TTC38-206ENST00000475467 PRELPP51888 382 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms