RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 EMILIN1Q9Y6C2 1016 aa9.38□□□□□ -0.91
LSAMP-204ENST00000475403 SLC24A1O60721 1099 aa9.37□□□□□ -0.91
LSAMP-204ENST00000475403 PTCD1O75127 700 aaKnown RBP9.37□□□□□ -0.91
LSAMP-204ENST00000475403 CRKLP46109 303 aaKnown RBP9.37□□□□□ -0.91
LSAMP-204ENST00000475403 CABP4P57796 275 aa9.37□□□□□ -0.91
LSAMP-204ENST00000475403 SLC4A9Q96Q91 983 aa9.37□□□□□ -0.91
LSAMP-204ENST00000475403 MYH14Q7Z406 1995 aaKnown RBP9.37□□□□□ -0.91
LSAMP-204ENST00000475403 IQCA1LA6NCM1 817 aa9.36□□□□□ -0.91
LSAMP-204ENST00000475403 TMEM88BA6NKF7 163 aa9.36□□□□□ -0.91
LSAMP-204ENST00000475403 ERVV-2B6SEH9 535 aa9.36□□□□□ -0.91
LSAMP-204ENST00000475403 VEGFBP49765 207 aa9.36□□□□□ -0.91
LSAMP-204ENST00000475403 C2CD5Q86YS7 1000 aa9.36□□□□□ -0.91
LSAMP-204ENST00000475403 BEGAINQ9BUH8 593 aa9.36□□□□□ -0.91
LSAMP-204ENST00000475403 DLEC1Q9Y238 1755 aa9.36□□□□□ -0.91
LSAMP-204ENST00000475403 NCAPD2Q15021 1401 aa9.36□□□□□ -0.91
LSAMP-204ENST00000475403 ANKRD26Q9UPS8 1709 aa9.36□□□□□ -0.91
LSAMP-204ENST00000475403 TONSLQ96HA7 1378 aa9.36□□□□□ -0.91
LSAMP-204ENST00000475403 H0YIN7 160 aa9.35□□□□□ -0.91
LSAMP-204ENST00000475403 MAP2K1Q02750 393 aaPredicted RBP9.35□□□□□ -0.91
LSAMP-204ENST00000475403 USPL1Q5W0Q7 1092 aa9.35□□□□□ -0.91
LSAMP-204ENST00000475403 LDHDQ86WU2 507 aa9.35□□□□□ -0.91
LSAMP-204ENST00000475403 CCER1Q8TC90 406 aaPredicted RBP9.35□□□□□ -0.91
LSAMP-204ENST00000475403 EYA1Q99502 592 aa9.35□□□□□ -0.91
LSAMP-204ENST00000475403 WBP1LQ9NX94 342 aa9.35□□□□□ -0.91
LSAMP-204ENST00000475403 ZNF219Q9P2Y4 722 aaPredicted RBP9.35□□□□□ -0.91
LSAMP-204ENST00000475403 AFDNP55196 1824 aaKnown RBP9.34□□□□□ -0.91
LSAMP-204ENST00000475403 POTECB2RU33 542 aa9.34□□□□□ -0.91
LSAMP-204ENST00000475403 NFKBIEO00221 500 aa9.34□□□□□ -0.91
LSAMP-204ENST00000475403 POTEIP0CG38 1075 aa9.34□□□□□ -0.91
LSAMP-204ENST00000475403 POTEJP0CG39 1038 aa9.34□□□□□ -0.91
LSAMP-204ENST00000475403 HSPA8P11142 646 aaKnown RBP9.34□□□□□ -0.91
LSAMP-204ENST00000475403 EAPPQ56P03 285 aaPredicted RBP9.34□□□□□ -0.91
LSAMP-204ENST00000475403 PAXIP1Q6ZW49 1069 aaPredicted RBP9.34□□□□□ -0.91
LSAMP-204ENST00000475403 ZNF622Q969S3 477 aaKnown RBP eCLIP9.34□□□□□ -0.91
LSAMP-204ENST00000475403 TAOK3Q9H2K8 898 aa9.34□□□□□ -0.91
LSAMP-204ENST00000475403 ABT1Q9ULW3 272 aaKnown RBP9.34□□□□□ -0.91
LSAMP-204ENST00000475403 DICER1Q9UPY3 1922 aaKnown RBP9.33□□□□□ -0.92
LSAMP-204ENST00000475403 ST20-MTHFSA0A0A6YYL1 179 aa9.33□□□□□ -0.92
LSAMP-204ENST00000475403 DDNO94850 711 aaPredicted RBP9.33□□□□□ -0.92
LSAMP-204ENST00000475403 TM4SF1P30408 202 aa9.33□□□□□ -0.92
LSAMP-204ENST00000475403 C1orf141Q5JVX7 400 aa9.33□□□□□ -0.92
LSAMP-204ENST00000475403 ZNF530Q6P9A1 599 aaPredicted RBP9.33□□□□□ -0.92
LSAMP-204ENST00000475403 CLEC11AQ9Y240 323 aa9.33□□□□□ -0.92
LSAMP-204ENST00000475403 VIRMAQ69YN4 1812 aaKnown RBP9.33□□□□□ -0.92
LSAMP-204ENST00000475403 WASHC2AQ641Q2 1341 aa9.32□□□□□ -0.92
LSAMP-204ENST00000475403 PASKQ96RG2 1323 aa9.32□□□□□ -0.92
LSAMP-204ENST00000475403 TJP1Q07157 1748 aa9.32□□□□□ -0.92
LSAMP-204ENST00000475403 NPHP1O15259 732 aa9.32□□□□□ -0.92
LSAMP-204ENST00000475403 C21orf2O43822 256 aa9.32□□□□□ -0.92
LSAMP-204ENST00000475403 SERPINB2P05120 415 aa9.32□□□□□ -0.92
LSAMP-204ENST00000475403 NFIXQ14938 502 aa9.32□□□□□ -0.92
LSAMP-204ENST00000475403 DEFB115Q30KQ5 88 aa9.32□□□□□ -0.92
LSAMP-204ENST00000475403 PLEKHO1Q53GL0 409 aaPredicted RBP9.32□□□□□ -0.92
LSAMP-204ENST00000475403 TESK2Q96S53 571 aa9.32□□□□□ -0.92
LSAMP-204ENST00000475403 WDR33Q9C0J8 1336 aaKnown RBP9.31□□□□□ -0.92
LSAMP-204ENST00000475403 MTHFSP49914 203 aa9.31□□□□□ -0.92
LSAMP-204ENST00000475403 GRM1Q13255 1194 aa9.31□□□□□ -0.92
LSAMP-204ENST00000475403 BICDL1Q6ZP65 573 aa9.31□□□□□ -0.92
LSAMP-204ENST00000475403 TSHZ2Q9NRE2 1034 aa9.31□□□□□ -0.92
LSAMP-204ENST00000475403 COL15A1P39059 1388 aa9.31□□□□□ -0.92
LSAMP-204ENST00000475403 SCN4AP35499 1836 aa9.31□□□□□ -0.92
LSAMP-204ENST00000475403 NRXN2Q9P2S2 1712 aa9.31□□□□□ -0.92
LSAMP-204ENST00000475403 CARMIL3Q8ND23 1372 aa9.3□□□□□ -0.92
LSAMP-204ENST00000475403 RASSF10A6NK89 507 aa9.3□□□□□ -0.92
LSAMP-204ENST00000475403 PDE6BP35913 854 aa9.3□□□□□ -0.92
LSAMP-204ENST00000475403 AMOTQ4VCS5 1084 aa9.3□□□□□ -0.92
LSAMP-204ENST00000475403 CDCA8Q53HL2 280 aa9.3□□□□□ -0.92
LSAMP-204ENST00000475403 SOGA3Q5TF21 947 aa9.3□□□□□ -0.92
LSAMP-204ENST00000475403 TAF1DQ9H5J8 278 aaPredicted RBP9.3□□□□□ -0.92
LSAMP-204ENST00000475403 NARFQ9UHQ1 456 aa9.3□□□□□ -0.92
LSAMP-204ENST00000475403 PDZRN3Q9UPQ7 1066 aa9.3□□□□□ -0.92
LSAMP-204ENST00000475403 FER1L6Q2WGJ9 1857 aa9.3□□□□□ -0.92
LSAMP-204ENST00000475403 SOS1Q07889 1333 aaPredicted RBP9.3□□□□□ -0.92
LSAMP-204ENST00000475403 RGS19P49795 217 aa9.29□□□□□ -0.92
LSAMP-204ENST00000475403 INTS5Q6P9B9 1019 aaKnown RBP9.29□□□□□ -0.92
LSAMP-204ENST00000475403 DNAJC10Q8IXB1 793 aa9.29□□□□□ -0.92
LSAMP-204ENST00000475403 NFATC2IPQ8NCF5 419 aa9.29□□□□□ -0.92
LSAMP-204ENST00000475403 ADAMTS7Q9UKP4 1686 aa9.29□□□□□ -0.92
LSAMP-204ENST00000475403 LTBP3Q9NS15 1303 aa9.29□□□□□ -0.92
LSAMP-204ENST00000475403 CACNA1SQ13698 1873 aa9.28□□□□□ -0.92
LSAMP-204ENST00000475403 ECE1P42892 770 aa9.28□□□□□ -0.92
LSAMP-204ENST00000475403 TNNT2P45379 298 aaPredicted RBP9.28□□□□□ -0.92
LSAMP-204ENST00000475403 EIF4A2Q14240 407 aaKnown RBP9.28□□□□□ -0.92
LSAMP-204ENST00000475403 CNKSR1Q969H4 720 aa9.28□□□□□ -0.92
LSAMP-204ENST00000475403 L3MBTL3Q96JM7 780 aaPredicted RBP9.28□□□□□ -0.92
LSAMP-204ENST00000475403 HACL1Q9UJ83 578 aa9.28□□□□□ -0.92
LSAMP-204ENST00000475403 SUPT16HQ9Y5B9 1047 aaKnown RBP9.28□□□□□ -0.92
LSAMP-204ENST00000475403 EPHX2P34913 555 aa9.27□□□□□ -0.93
LSAMP-204ENST00000475403 MAP1SQ66K74 1059 aaPredicted RBP9.27□□□□□ -0.93
LSAMP-204ENST00000475403 PNMA8AQ86V59 439 aaPredicted RBP9.27□□□□□ -0.93
LSAMP-204ENST00000475403 CNTROBQ8N137 903 aa9.27□□□□□ -0.93
LSAMP-204ENST00000475403 COL11A2P13942 1736 aaPredicted RBP9.27□□□□□ -0.93
LSAMP-204ENST00000475403 ITGBL1O95965 494 aaPredicted RBP9.26□□□□□ -0.93
LSAMP-204ENST00000475403 ST5P78524 1137 aa9.26□□□□□ -0.93
LSAMP-204ENST00000475403 PRPF40BQ6NWY9 871 aaKnown RBP9.26□□□□□ -0.93
LSAMP-204ENST00000475403 NPM2Q86SE8 214 aaKnown RBP9.26□□□□□ -0.93
LSAMP-204ENST00000475403 CAPNS2Q96L46 248 aa9.26□□□□□ -0.93
LSAMP-204ENST00000475403 BRIP1Q9BX63 1249 aa9.26□□□□□ -0.93
LSAMP-204ENST00000475403 POLKQ9UBT6 870 aa9.26□□□□□ -0.93
LSAMP-204ENST00000475403 TSKSQ9UJT2 592 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms