RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 SSH1Q8WYL5 1049 aa12.49□□□□□ -0.41
ITGA6-210ENST00000475302 ZNF428Q96B54 188 aa12.49□□□□□ -0.41
ITGA6-210ENST00000475302 CEMIPQ8WUJ3 1361 aa12.48□□□□□ -0.41
ITGA6-210ENST00000475302 KIAA0232Q92628 1395 aa12.48□□□□□ -0.41
ITGA6-210ENST00000475302 PLEKHG2Q9H7P9 1386 aa12.48□□□□□ -0.41
ITGA6-210ENST00000475302 TSPYL6Q8N831 410 aa12.48□□□□□ -0.41
ITGA6-210ENST00000475302 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.48□□□□□ -0.41
ITGA6-210ENST00000475302 C8orf58Q8NAV2 365 aa12.48□□□□□ -0.41
ITGA6-210ENST00000475302 LHX6Q9UPM6 363 aa12.48□□□□□ -0.41
ITGA6-210ENST00000475302 ADAMTS7Q9UKP4 1686 aa12.48□□□□□ -0.41
ITGA6-210ENST00000475302 ROBO1Q9Y6N7 1651 aa12.48□□□□□ -0.41
ITGA6-210ENST00000475302 ALDH1L2Q3SY69 923 aa12.47□□□□□ -0.41
ITGA6-210ENST00000475302 TSHZ2Q9NRE2 1034 aa12.47□□□□□ -0.41
ITGA6-210ENST00000475302 MAP3K5Q99683 1374 aa12.46□□□□□ -0.41
ITGA6-210ENST00000475302 GNAT3A8MTJ3 354 aa12.46□□□□□ -0.41
ITGA6-210ENST00000475302 EMILIN3Q9NT22 766 aa12.46□□□□□ -0.41
ITGA6-210ENST00000475302 BABAM1Q9NWV8 329 aa12.46□□□□□ -0.41
ITGA6-210ENST00000475302 TNNQ9UQP3 1299 aa12.46□□□□□ -0.41
ITGA6-210ENST00000475302 COL22A1Q8NFW1 1626 aaPredicted RBP12.46□□□□□ -0.41
ITGA6-210ENST00000475302 RLBP1P12271 317 aa12.45□□□□□ -0.42
ITGA6-210ENST00000475302 ZBTB7CA1YPR0 619 aa12.44□□□□□ -0.42
ITGA6-210ENST00000475302 CHRNA2Q15822 529 aa12.44□□□□□ -0.42
ITGA6-210ENST00000475302 AMOTQ4VCS5 1084 aa12.44□□□□□ -0.42
ITGA6-210ENST00000475302 MRPL50Q8N5N7 158 aaKnown RBP12.44□□□□□ -0.42
ITGA6-210ENST00000475302 OVOS2A0A0G2JMS6 1433 aa12.44□□□□□ -0.42
ITGA6-210ENST00000475302 TBC1D12O60347 775 aa12.43□□□□□ -0.42
ITGA6-210ENST00000475302 PLEKHO1Q53GL0 409 aaPredicted RBP12.43□□□□□ -0.42
ITGA6-210ENST00000475302 PANK1Q8TE04 598 aa12.43□□□□□ -0.42
ITGA6-210ENST00000475302 BCL2L13Q9BXK5 485 aa12.43□□□□□ -0.42
ITGA6-210ENST00000475302 KRTAP3-3Q9BYR6 98 aa12.43□□□□□ -0.42
ITGA6-210ENST00000475302 KRTAP3-2Q9BYR7 98 aa12.43□□□□□ -0.42
ITGA6-210ENST00000475302 LAS1LQ9Y4W2 734 aaKnown RBP12.43□□□□□ -0.42
ITGA6-210ENST00000475302 MEGF6O75095 1541 aa12.42□□□□□ -0.42
ITGA6-210ENST00000475302 COL5A2P05997 1499 aaPredicted RBP12.42□□□□□ -0.42
ITGA6-210ENST00000475302 COL16A1Q07092 1604 aaPredicted RBP12.42□□□□□ -0.42
ITGA6-210ENST00000475302 KRT24Q2M2I5 525 aa12.42□□□□□ -0.42
ITGA6-210ENST00000475302 TWISTNBQ3B726 338 aaPredicted RBP12.42□□□□□ -0.42
ITGA6-210ENST00000475302 AKAP4Q5JQC9 854 aa12.42□□□□□ -0.42
ITGA6-210ENST00000475302 ZKSCAN2Q63HK3 967 aa12.42□□□□□ -0.42
ITGA6-210ENST00000475302 ARHGAP45Q92619 1136 aa12.42□□□□□ -0.42
ITGA6-210ENST00000475302 CCDC136Q96JN2 1154 aa12.42□□□□□ -0.42
ITGA6-210ENST00000475302 LGR6Q9HBX8 967 aa12.42□□□□□ -0.42
ITGA6-210ENST00000475302 KDM2BQ8NHM5 1336 aa12.41□□□□□ -0.42
ITGA6-210ENST00000475302 TRIM27P14373 513 aa12.41□□□□□ -0.42
ITGA6-210ENST00000475302 TAF7Q15545 349 aaPredicted RBP12.41□□□□□ -0.42
ITGA6-210ENST00000475302 PKD1L3Q7Z443 1732 aa12.41□□□□□ -0.42
ITGA6-210ENST00000475302 RTF1Q92541 710 aaKnown RBP12.41□□□□□ -0.42
ITGA6-210ENST00000475302 SMC4Q9NTJ3 1288 aa12.41□□□□□ -0.42
ITGA6-210ENST00000475302 MIS18AQ9NYP9 233 aa12.41□□□□□ -0.42
ITGA6-210ENST00000475302 NOB1Q9ULX3 412 aaKnown RBP12.41□□□□□ -0.42
ITGA6-210ENST00000475302 WDR17Q8IZU2 1322 aa12.4□□□□□ -0.42
ITGA6-210ENST00000475302 ATF7IPQ6VMQ6 1270 aa12.4□□□□□ -0.42
ITGA6-210ENST00000475302 FRAT1Q92837 279 aaPredicted RBP12.4□□□□□ -0.42
ITGA6-210ENST00000475302 SIPA1L3O60292 1781 aaPredicted RBP12.4□□□□□ -0.42
ITGA6-210ENST00000475302 KDM3BQ7LBC6 1761 aa12.4□□□□□ -0.42
ITGA6-210ENST00000475302 ELL2O00472 640 aaPredicted RBP12.39□□□□□ -0.43
ITGA6-210ENST00000475302 RNMTO43148 476 aaKnown RBP12.39□□□□□ -0.43
ITGA6-210ENST00000475302 CAMK2BQ13554 666 aa12.39□□□□□ -0.43
ITGA6-210ENST00000475302 AAMPQ13685 434 aa12.39□□□□□ -0.43
ITGA6-210ENST00000475302 ZNF530Q6P9A1 599 aaPredicted RBP12.39□□□□□ -0.43
ITGA6-210ENST00000475302 ZNF687Q8N1G0 1237 aa12.39□□□□□ -0.43
ITGA6-210ENST00000475302 PRDM11Q9NQV5 511 aa12.39□□□□□ -0.43
ITGA6-210ENST00000475302 NLRP2Q9NX02 1062 aa12.39□□□□□ -0.43
ITGA6-210ENST00000475302 COG6Q9Y2V7 657 aa12.39□□□□□ -0.43
ITGA6-210ENST00000475302 SOS1Q07889 1333 aaPredicted RBP12.38□□□□□ -0.43
ITGA6-210ENST00000475302 KIF16BQ96L93 1317 aa12.38□□□□□ -0.43
ITGA6-210ENST00000475302 HAP1P54257 671 aaPredicted RBP12.38□□□□□ -0.43
ITGA6-210ENST00000475302 DZIP1LQ8IYY4 767 aaKnown RBP12.38□□□□□ -0.43
ITGA6-210ENST00000475302 PLSCR2Q9NRY7 297 aa12.38□□□□□ -0.43
ITGA6-210ENST00000475302 HEG1Q9ULI3 1381 aa12.38□□□□□ -0.43
ITGA6-210ENST00000475302 RGS12O14924 1447 aa12.37□□□□□ -0.43
ITGA6-210ENST00000475302 KDM6AO15550 1401 aaPredicted RBP12.37□□□□□ -0.43
ITGA6-210ENST00000475302 MS4A1P11836 297 aa12.37□□□□□ -0.43
ITGA6-210ENST00000475302 MVPQ14764 893 aaKnown RBP12.37□□□□□ -0.43
ITGA6-210ENST00000475302 CARD10Q9BWT7 1032 aa12.37□□□□□ -0.43
ITGA6-210ENST00000475302 TSPYL4Q9UJ04 414 aa12.37□□□□□ -0.43
ITGA6-210ENST00000475302 COL14A1Q05707 1796 aaKnown RBP12.36□□□□□ -0.43
ITGA6-210ENST00000475302 IPO8O15397 1037 aaKnown RBP12.36□□□□□ -0.43
ITGA6-210ENST00000475302 CYP27B1O15528 508 aa12.36□□□□□ -0.43
ITGA6-210ENST00000475302 PHKG2P15735 406 aa12.36□□□□□ -0.43
ITGA6-210ENST00000475302 TATP17735 454 aaPredicted RBP12.36□□□□□ -0.43
ITGA6-210ENST00000475302 MAP3K9P80192 1104 aa12.36□□□□□ -0.43
ITGA6-210ENST00000475302 MPRIPQ6WCQ1 1025 aa12.36□□□□□ -0.43
ITGA6-210ENST00000475302 VIRMAQ69YN4 1812 aaKnown RBP12.36□□□□□ -0.43
ITGA6-210ENST00000475302 ABCC4O15439 1325 aa12.36□□□□□ -0.43
ITGA6-210ENST00000475302 SCN11AQ9UI33 1791 aa12.35□□□□□ -0.43
ITGA6-210ENST00000475302 MRC1P22897 1456 aa12.35□□□□□ -0.43
ITGA6-210ENST00000475302 EVI5O60447 810 aa12.35□□□□□ -0.43
ITGA6-210ENST00000475302 EIF4A1P60842 406 aaKnown RBP12.35□□□□□ -0.43
ITGA6-210ENST00000475302 TMEM57Q8N5G2 664 aa12.35□□□□□ -0.43
ITGA6-210ENST00000475302 RAPGEF4Q8WZA2 1011 aa12.35□□□□□ -0.43
ITGA6-210ENST00000475302 CLUAP1Q96AJ1 413 aa12.35□□□□□ -0.43
ITGA6-210ENST00000475302 PHLPP1O60346 1717 aa12.34□□□□□ -0.43
ITGA6-210ENST00000475302 SHANK3Q9BYB0 1731 aa12.34□□□□□ -0.43
ITGA6-210ENST00000475302 TCERG1O14776 1098 aaKnown RBP12.34□□□□□ -0.43
ITGA6-210ENST00000475302 KCNQ3O43525 872 aa12.34□□□□□ -0.43
ITGA6-210ENST00000475302 TOM1O60784 492 aa12.34□□□□□ -0.43
ITGA6-210ENST00000475302 CSB-PGBD3P0DP91 1061 aa12.34□□□□□ -0.43
ITGA6-210ENST00000475302 CANXP27824 592 aaKnown RBP12.34□□□□□ -0.43
ITGA6-210ENST00000475302 LARP1Q6PKG0 1096 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms