RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 RBM46Q8TBY0 533 aaKnown RBP24.19■■□□□ 1.46
PCGF3-209ENST00000475288 PER1O15534 1290 aaPredicted RBP24.18■■□□□ 1.46
PCGF3-209ENST00000475288 CCER1Q8TC90 406 aaPredicted RBP24.18■■□□□ 1.46
PCGF3-209ENST00000475288 AFDNP55196 1824 aaKnown RBP24.18■■□□□ 1.46
PCGF3-209ENST00000475288 DLEC1Q9Y238 1755 aa24.18■■□□□ 1.46
PCGF3-209ENST00000475288 KDM2BQ8NHM5 1336 aa24.17■■□□□ 1.46
PCGF3-209ENST00000475288 ZC3H4Q9UPT8 1303 aaKnown RBP24.17■■□□□ 1.46
PCGF3-209ENST00000475288 HMOX1P09601 288 aa24.17■■□□□ 1.46
PCGF3-209ENST00000475288 CHRNA5P30532 468 aa24.17■■□□□ 1.46
PCGF3-209ENST00000475288 MTHFSDQ2M296 383 aaKnown RBP24.17■■□□□ 1.46
PCGF3-209ENST00000475288 TNRC6CQ9HCJ0 1690 aaKnown RBP24.17■■□□□ 1.46
PCGF3-209ENST00000475288 SBF1O95248 1867 aa24.17■■□□□ 1.46
PCGF3-209ENST00000475288 DIAPH1O60610 1272 aaKnown RBP24.16■■□□□ 1.46
PCGF3-209ENST00000475288 SLC39A6Q13433 755 aa24.16■■□□□ 1.46
PCGF3-209ENST00000475288 DNAJC5GQ8N7S2 189 aa24.16■■□□□ 1.46
PCGF3-209ENST00000475288 NPC1L1Q9UHC9 1359 aa24.16■■□□□ 1.46
PCGF3-209ENST00000475288 NFIXQ14938 502 aa24.15■■□□□ 1.46
PCGF3-209ENST00000475288 RNF181Q9P0P0 153 aa24.15■■□□□ 1.46
PCGF3-209ENST00000475288 ZBTB1Q9Y2K1 713 aa24.15■■□□□ 1.46
PCGF3-209ENST00000475288 WDR90Q96KV7 1748 aa24.15■■□□□ 1.46
PCGF3-209ENST00000475288 FSTL1Q12841 308 aa24.14■■□□□ 1.45
PCGF3-209ENST00000475288 COL3A1P02461 1466 aaPredicted RBP24.13■■□□□ 1.45
PCGF3-209ENST00000475288 C16orf71Q8IYS4 520 aaPredicted RBP24.12■■□□□ 1.45
PCGF3-209ENST00000475288 BCL2L12Q9HB09 334 aa24.12■■□□□ 1.45
PCGF3-209ENST00000475288 STARD3NLO95772 234 aa24.1■■□□□ 1.45
PCGF3-209ENST00000475288 SERPINB2P05120 415 aa24.1■■□□□ 1.45
PCGF3-209ENST00000475288 SIPA1L3O60292 1781 aaPredicted RBP24.09■■□□□ 1.45
PCGF3-209ENST00000475288 A0A087WZG4 1122 aa24.09■■□□□ 1.45
PCGF3-209ENST00000475288 EIF5P55010 431 aaKnown RBP24.09■■□□□ 1.45
PCGF3-209ENST00000475288 TTC5Q8N0Z6 440 aa24.09■■□□□ 1.45
PCGF3-209ENST00000475288 SCN7AQ01118 1682 aa24.08■■□□□ 1.44
PCGF3-209ENST00000475288 LMNB1P20700 586 aa24.07■■□□□ 1.44
PCGF3-209ENST00000475288 CC2D1BQ5T0F9 858 aaKnown RBP24.07■■□□□ 1.44
PCGF3-209ENST00000475288 TTLL6Q8N841 843 aa24.07■■□□□ 1.44
PCGF3-209ENST00000475288 TEX13AQ9BXU3 409 aaPredicted RBP24.07■■□□□ 1.44
PCGF3-209ENST00000475288 PDZRN3Q9UPQ7 1066 aa24.07■■□□□ 1.44
PCGF3-209ENST00000475288 HEG1Q9ULI3 1381 aa24.06■■□□□ 1.44
PCGF3-209ENST00000475288 GAS2L2Q8NHY3 880 aa24.06■■□□□ 1.44
PCGF3-209ENST00000475288 GNAT3A8MTJ3 354 aa24.04■■□□□ 1.44
PCGF3-209ENST00000475288 H0YIN7 160 aa24.04■■□□□ 1.44
PCGF3-209ENST00000475288 CANXP27824 592 aaKnown RBP24.04■■□□□ 1.44
PCGF3-209ENST00000475288 ZNF790Q6PG37 636 aa24.04■■□□□ 1.44
PCGF3-209ENST00000475288 RRAGCQ9HB90 399 aa24.04■■□□□ 1.44
PCGF3-209ENST00000475288 CARMIL3Q8ND23 1372 aa24.03■■□□□ 1.44
PCGF3-209ENST00000475288 RASSF7Q02833 373 aa24.03■■□□□ 1.44
PCGF3-209ENST00000475288 TEFQ10587 303 aa24.03■■□□□ 1.44
PCGF3-209ENST00000475288 C2CD5Q86YS7 1000 aa24.03■■□□□ 1.44
PCGF3-209ENST00000475288 IL17REQ8NFR9 667 aa24.03■■□□□ 1.44
PCGF3-209ENST00000475288 KLRG1Q96E93 195 aa24.03■■□□□ 1.44
PCGF3-209ENST00000475288 ZNF496Q96IT1 587 aaPredicted RBP24.03■■□□□ 1.44
PCGF3-209ENST00000475288 CEMIPQ8WUJ3 1361 aa24.03■■□□□ 1.44
PCGF3-209ENST00000475288 TIAM2Q8IVF5 1701 aa24.02■■□□□ 1.44
PCGF3-209ENST00000475288 SMC1BQ8NDV3 1235 aa24.02■■□□□ 1.44
PCGF3-209ENST00000475288 ANKRD31Q8N7Z5 1873 aa24.02■■□□□ 1.44
PCGF3-209ENST00000475288 GLTPD2A6NH11 291 aa24.01■■□□□ 1.43
PCGF3-209ENST00000475288 IL6STP40189 918 aaPredicted RBP24.01■■□□□ 1.43
PCGF3-209ENST00000475288 JMYQ8N9B5 988 aa24.01■■□□□ 1.43
PCGF3-209ENST00000475288 PRELPP51888 382 aa24■■□□□ 1.43
PCGF3-209ENST00000475288 BRIP1Q9BX63 1249 aa24■■□□□ 1.43
PCGF3-209ENST00000475288 U2SURPO15042 1029 aaKnown RBP23.99■■□□□ 1.43
PCGF3-209ENST00000475288 PDE6BP35913 854 aa23.99■■□□□ 1.43
PCGF3-209ENST00000475288 TBC1D9BQ66K14 1250 aa23.99■■□□□ 1.43
PCGF3-209ENST00000475288 FMNL2Q96PY5 1086 aa23.99■■□□□ 1.43
PCGF3-209ENST00000475288 NFKBIEO00221 500 aa23.98■■□□□ 1.43
PCGF3-209ENST00000475288 VEGFAP15692 232 aaPredicted RBP23.98■■□□□ 1.43
PCGF3-209ENST00000475288 CCDC88AQ3V6T2 1871 aa23.98■■□□□ 1.43
PCGF3-209ENST00000475288 COL11A2P13942 1736 aaPredicted RBP23.97■■□□□ 1.43
PCGF3-209ENST00000475288 FER1L6Q2WGJ9 1857 aa23.96■■□□□ 1.43
PCGF3-209ENST00000475288 BCORQ6W2J9 1755 aa23.96■■□□□ 1.43
PCGF3-209ENST00000475288 PRR5LQ6MZQ0 368 aa23.96■■□□□ 1.43
PCGF3-209ENST00000475288 BICDL1Q6ZP65 573 aa23.96■■□□□ 1.43
PCGF3-209ENST00000475288 PCNTO95613 3336 aa23.95■■□□□ 1.42
PCGF3-209ENST00000475288 DICER1Q9UPY3 1922 aaKnown RBP23.95■■□□□ 1.42
PCGF3-209ENST00000475288 LTBP3Q9NS15 1303 aa23.94■■□□□ 1.42
PCGF3-209ENST00000475288 TBC1D2BQ9UPU7 963 aa23.94■■□□□ 1.42
PCGF3-209ENST00000475288 CAMTA2O94983 1202 aa23.93■■□□□ 1.42
PCGF3-209ENST00000475288 HTRA3P83110 453 aa23.93■■□□□ 1.42
PCGF3-209ENST00000475288 RSPH6AQ9H0K4 717 aa23.93■■□□□ 1.42
PCGF3-209ENST00000475288 ARFGEF2Q9Y6D5 1785 aa23.93■■□□□ 1.42
PCGF3-209ENST00000475288 NPM2Q86SE8 214 aaKnown RBP23.92■■□□□ 1.42
PCGF3-209ENST00000475288 CFAP53Q96M91 514 aa23.92■■□□□ 1.42
PCGF3-209ENST00000475288 SETDB2Q96T68 719 aa23.92■■□□□ 1.42
PCGF3-209ENST00000475288 BTBD11A6QL63 1104 aa23.91■■□□□ 1.42
PCGF3-209ENST00000475288 A1BGP04217 495 aa23.91■■□□□ 1.42
PCGF3-209ENST00000475288 DPY19L2Q6NUT2 758 aa23.91■■□□□ 1.42
PCGF3-209ENST00000475288 ZNF622Q969S3 477 aaKnown RBP eCLIP23.91■■□□□ 1.42
PCGF3-209ENST00000475288 PHACTR3Q96KR7 559 aa23.91■■□□□ 1.42
PCGF3-209ENST00000475288 RGL2O15211 777 aa23.9■■□□□ 1.42
PCGF3-209ENST00000475288 PRKAR2BP31323 418 aa23.9■■□□□ 1.42
PCGF3-209ENST00000475288 STYK1Q6J9G0 422 aa23.9■■□□□ 1.42
PCGF3-209ENST00000475288 CNBD1Q8NA66 436 aa23.9■■□□□ 1.42
PCGF3-209ENST00000475288 CNKSR1Q969H4 720 aa23.9■■□□□ 1.42
PCGF3-209ENST00000475288 CLEC4GQ6UXB4 293 aa23.89■■□□□ 1.41
PCGF3-209ENST00000475288 ZNF330Q9Y3S2 320 aaPredicted RBP23.89■■□□□ 1.41
PCGF3-209ENST00000475288 POTECB2RU33 542 aa23.88■■□□□ 1.41
PCGF3-209ENST00000475288 C21orf2O43822 256 aa23.88■■□□□ 1.41
PCGF3-209ENST00000475288 SRGNP10124 158 aa23.88■■□□□ 1.41
PCGF3-209ENST00000475288 ST5P78524 1137 aa23.88■■□□□ 1.41
PCGF3-209ENST00000475288 SOGA3Q5TF21 947 aa23.88■■□□□ 1.41
PCGF3-209ENST00000475288 DZIP3Q86Y13 1208 aaKnown RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms