RNA–Protein interactions for RNA: ENST00000475126.5

CSTF2-204, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 5

Gene CSTF2, Length 1,693 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-204ENST00000475126 USP16Q9Y5T5 823 aa15.26■□□□□ 0.03
CSTF2-204ENST00000475126 RBM42Q9BTD8 480 aaKnown RBP15.25■□□□□ 0.03
CSTF2-204ENST00000475126 ITGB4P16144 1822 aa15.25■□□□□ 0.03
CSTF2-204ENST00000475126 PIP4K2AP48426 406 aaPredicted RBP15.25■□□□□ 0.03
CSTF2-204ENST00000475126 FLIIQ13045 1269 aa15.25■□□□□ 0.03
CSTF2-204ENST00000475126 POTEAQ6S8J7 498 aa15.25■□□□□ 0.03
CSTF2-204ENST00000475126 ARHGAP45Q92619 1136 aa15.25■□□□□ 0.03
CSTF2-204ENST00000475126 SLC4A9Q96Q91 983 aa15.25■□□□□ 0.03
CSTF2-204ENST00000475126 PHAXQ9H814 394 aaKnown RBP15.25■□□□□ 0.03
CSTF2-204ENST00000475126 ABCC4O15439 1325 aa15.24■□□□□ 0.03
CSTF2-204ENST00000475126 PTPRCP08575 1304 aa15.24■□□□□ 0.03
CSTF2-204ENST00000475126 RXRBP28702 533 aa15.23■□□□□ 0.03
CSTF2-204ENST00000475126 PDIA6Q15084 440 aa15.23■□□□□ 0.03
CSTF2-204ENST00000475126 KRT27Q7Z3Y8 459 aa15.23■□□□□ 0.03
CSTF2-204ENST00000475126 TMEM57Q8N5G2 664 aa15.23■□□□□ 0.03
CSTF2-204ENST00000475126 API5Q9BZZ5 524 aaKnown RBP15.23■□□□□ 0.03
CSTF2-204ENST00000475126 DBF4Q9UBU7 674 aaPredicted RBP15.23■□□□□ 0.03
CSTF2-204ENST00000475126 PALLDQ8WX93 1383 aa15.22■□□□□ 0.03
CSTF2-204ENST00000475126 ERICH6BQ5W0A0 696 aa15.22■□□□□ 0.03
CSTF2-204ENST00000475126 DNAJC10Q8IXB1 793 aa15.22■□□□□ 0.03
CSTF2-204ENST00000475126 F6X3S4 739 aa15.22■□□□□ 0.03
CSTF2-204ENST00000475126 MYL6BP14649 208 aa15.22■□□□□ 0.03
CSTF2-204ENST00000475126 FKBP5Q13451 457 aaPredicted RBP15.22■□□□□ 0.03
CSTF2-204ENST00000475126 ITPRIPQ8IWB1 547 aa15.22■□□□□ 0.03
CSTF2-204ENST00000475126 CHMP4AQ9BY43 222 aa15.22■□□□□ 0.03
CSTF2-204ENST00000475126 MS4A1P11836 297 aa15.21■□□□□ 0.03
CSTF2-204ENST00000475126 MVPQ14764 893 aaKnown RBP15.21■□□□□ 0.03
CSTF2-204ENST00000475126 DDX21Q9NR30 783 aaKnown RBP eCLIP15.21■□□□□ 0.03
CSTF2-204ENST00000475126 LAMB4A4D0S4 1761 aa15.21■□□□□ 0.02
CSTF2-204ENST00000475126 NHSQ6T4R5 1651 aa15.2■□□□□ 0.02
CSTF2-204ENST00000475126 VSIG10Q8N0Z9 540 aa15.2■□□□□ 0.02
CSTF2-204ENST00000475126 NBPF26B4DH59 902 aa15.19■□□□□ 0.02
CSTF2-204ENST00000475126 A1BGP04217 495 aa15.19■□□□□ 0.02
CSTF2-204ENST00000475126 NBPF14Q5TI25 921 aa15.19■□□□□ 0.02
CSTF2-204ENST00000475126 NBPF10Q6P3W6 841 aaKnown RBP15.19■□□□□ 0.02
CSTF2-204ENST00000475126 LRP10Q7Z4F1 713 aa15.19■□□□□ 0.02
CSTF2-204ENST00000475126 NBPF15Q8N660 670 aa15.19■□□□□ 0.02
CSTF2-204ENST00000475126 PPP4R2Q9NY27 417 aa15.19■□□□□ 0.02
CSTF2-204ENST00000475126 LOC102724428A0A0B4J2F2 783 aa15.19■□□□□ 0.02
CSTF2-204ENST00000475126 SIK1P57059 783 aa15.19■□□□□ 0.02
CSTF2-204ENST00000475126 ILDR1Q86SU0 546 aaPredicted RBP15.19■□□□□ 0.02
CSTF2-204ENST00000475126 HYPKQ9NX55 129 aa15.19■□□□□ 0.02
CSTF2-204ENST00000475126 AIMP1Q12904 312 aaKnown RBP15.18■□□□□ 0.02
CSTF2-204ENST00000475126 B4GALNT3Q6L9W6 998 aa15.18■□□□□ 0.02
CSTF2-204ENST00000475126 SLC4A10Q6U841 1118 aa15.18■□□□□ 0.02
CSTF2-204ENST00000475126 SMARCC1Q92922 1105 aaPredicted RBP15.18■□□□□ 0.02
CSTF2-204ENST00000475126 ADCY9O60503 1353 aa15.18■□□□□ 0.02
CSTF2-204ENST00000475126 BRWD3Q6RI45 1802 aa15.17■□□□□ 0.02
CSTF2-204ENST00000475126 ATP6V1AP38606 617 aa15.17■□□□□ 0.02
CSTF2-204ENST00000475126 ITPK1Q13572 414 aa15.17■□□□□ 0.02
CSTF2-204ENST00000475126 FAM196AQ6ZSG2 479 aa15.17■□□□□ 0.02
CSTF2-204ENST00000475126 XAGE3Q8WTP9 111 aa15.17■□□□□ 0.02
CSTF2-204ENST00000475126 ERBB4Q15303 1308 aa15.17■□□□□ 0.02
CSTF2-204ENST00000475126 TJP1Q07157 1748 aa15.17■□□□□ 0.02
CSTF2-204ENST00000475126 PI4KAP2A4QPH2 592 aa15.16■□□□□ 0.02
CSTF2-204ENST00000475126 CYP19A1P11511 503 aaPredicted RBP15.16■□□□□ 0.02
CSTF2-204ENST00000475126 KCNQ4P56696 695 aa15.16■□□□□ 0.02
CSTF2-204ENST00000475126 PI4KAP1Q8N8J0 262 aa15.16■□□□□ 0.02
CSTF2-204ENST00000475126 TEX13AQ9BXU3 409 aaPredicted RBP15.16■□□□□ 0.02
CSTF2-204ENST00000475126 STARD3NLO95772 234 aa15.16■□□□□ 0.02
CSTF2-204ENST00000475126 INTS3Q68E01 1043 aaKnown RBP15.16■□□□□ 0.02
CSTF2-204ENST00000475126 COPS6Q7L5N1 327 aa15.16■□□□□ 0.02
CSTF2-204ENST00000475126 BCL11BQ9C0K0 894 aaPredicted RBP15.16■□□□□ 0.02
CSTF2-204ENST00000475126 DDX19BQ9UMR2 479 aa15.16■□□□□ 0.02
CSTF2-204ENST00000475126 TRIM37O94972 964 aa15.15■□□□□ 0.02
CSTF2-204ENST00000475126 ZBTB1Q9Y2K1 713 aa15.15■□□□□ 0.02
CSTF2-204ENST00000475126 BTAF1O14981 1849 aa15.14■□□□□ 0.01
CSTF2-204ENST00000475126 DNAAF4Q8WXU2 420 aa15.14■□□□□ 0.01
CSTF2-204ENST00000475126 CCDC136Q96JN2 1154 aa15.14■□□□□ 0.01
CSTF2-204ENST00000475126 MAP3K2Q9Y2U5 619 aa15.14■□□□□ 0.01
CSTF2-204ENST00000475126 ZNF330Q9Y3S2 320 aaPredicted RBP15.14■□□□□ 0.01
CSTF2-204ENST00000475126 PXDNLA1KZ92 1463 aa15.13■□□□□ 0.01
CSTF2-204ENST00000475126 ZBTB7BO15156 539 aaPredicted RBP15.12■□□□□ 0.01
CSTF2-204ENST00000475126 CCT4P50991 539 aaKnown RBP15.12■□□□□ 0.01
CSTF2-204ENST00000475126 KSR2Q6VAB6 950 aa15.12■□□□□ 0.01
CSTF2-204ENST00000475126 TTLL7Q6ZT98 887 aa15.12■□□□□ 0.01
CSTF2-204ENST00000475126 DDX58O95786 925 aaKnown RBP15.12■□□□□ 0.01
CSTF2-204ENST00000475126 CRKLP46109 303 aaKnown RBP15.12■□□□□ 0.01
CSTF2-204ENST00000475126 LINC00116Q8NCU8 138 aa15.12■□□□□ 0.01
CSTF2-204ENST00000475126 ZBTB40Q9NUA8 1239 aa15.12■□□□□ 0.01
CSTF2-204ENST00000475126 CICQ96RK0 1608 aaPredicted RBP15.12■□□□□ 0.01
CSTF2-204ENST00000475126 BEND3Q5T5X7 828 aa15.11■□□□□ 0.01
CSTF2-204ENST00000475126 INTS5Q6P9B9 1019 aaKnown RBP15.11■□□□□ 0.01
CSTF2-204ENST00000475126 RIC3Q7Z5B4 369 aa15.11■□□□□ 0.01
CSTF2-204ENST00000475126 MEIS3Q99687 375 aa15.11■□□□□ 0.01
CSTF2-204ENST00000475126 C1orf115Q9H7X2 142 aa15.11■□□□□ 0.01
CSTF2-204ENST00000475126 CCDC87Q9NVE4 849 aa15.11■□□□□ 0.01
CSTF2-204ENST00000475126 CCNL1Q9UK58 526 aaPredicted RBP15.11■□□□□ 0.01
CSTF2-204ENST00000475126 SBF2Q86WG5 1849 aa15.11■□□□□ 0.01
CSTF2-204ENST00000475126 ANKRD13DQ6ZTN6 518 aa15.1■□□□□ 0.01
CSTF2-204ENST00000475126 PCDHB15Q9Y5E8 787 aa15.1■□□□□ 0.01
CSTF2-204ENST00000475126 EP400Q96L91 3159 aa15.1■□□□□ 0.01
CSTF2-204ENST00000475126 ATP10DQ9P241 1426 aa15.1■□□□□ 0.01
CSTF2-204ENST00000475126 SRCIN1Q9C0H9 1055 aa15.09■□□□□ 0.01
CSTF2-204ENST00000475126 ZBTB3Q9H5J0 574 aa15.09■□□□□ 0.01
CSTF2-204ENST00000475126 CWF19L2Q2TBE0 894 aaKnown RBP15.09■□□□□ 0.01
CSTF2-204ENST00000475126 KAT6BQ8WYB5 2073 aa15.08■□□□□ 0.01
CSTF2-204ENST00000475126 AAMPQ13685 434 aa15.08■□□□□ 0
CSTF2-204ENST00000475126 PLBD2Q8NHP8 589 aa15.08■□□□□ 0
CSTF2-204ENST00000475126 MYD88Q99836 296 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms