RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 TM4SF1P30408 202 aa24.56■■□□□ 1.52
DNMT3A-210ENST00000474807 DDR1Q08345 913 aa24.56■■□□□ 1.52
DNMT3A-210ENST00000474807 USPL1Q5W0Q7 1092 aa24.56■■□□□ 1.52
DNMT3A-210ENST00000474807 A0A0G2JLW4 131 aa24.55■■□□□ 1.52
DNMT3A-210ENST00000474807 NARFQ9UHQ1 456 aa24.55■■□□□ 1.52
DNMT3A-210ENST00000474807 STARD3NLO95772 234 aa24.54■■□□□ 1.52
DNMT3A-210ENST00000474807 BTBD11A6QL63 1104 aa24.53■■□□□ 1.52
DNMT3A-210ENST00000474807 POLRMTO00411 1230 aaKnown RBP24.53■■□□□ 1.52
DNMT3A-210ENST00000474807 DPEP1P16444 411 aa24.52■■□□□ 1.52
DNMT3A-210ENST00000474807 CANXP27824 592 aaKnown RBP24.52■■□□□ 1.52
DNMT3A-210ENST00000474807 EIF5P55010 431 aaKnown RBP24.52■■□□□ 1.52
DNMT3A-210ENST00000474807 FMNL2Q96PY5 1086 aa24.52■■□□□ 1.52
DNMT3A-210ENST00000474807 TEX13AQ9BXU3 409 aaPredicted RBP24.52■■□□□ 1.52
DNMT3A-210ENST00000474807 BCL2L12Q9HB09 334 aa24.52■■□□□ 1.52
DNMT3A-210ENST00000474807 KCNQ3O43525 872 aa24.51■■□□□ 1.51
DNMT3A-210ENST00000474807 RTF1Q92541 710 aaKnown RBP24.51■■□□□ 1.51
DNMT3A-210ENST00000474807 BRCA1P38398 1863 aaKnown RBP24.5■■□□□ 1.51
DNMT3A-210ENST00000474807 HTATSF1O43719 755 aaKnown RBP24.5■■□□□ 1.51
DNMT3A-210ENST00000474807 KCNA3P22001 575 aa24.5■■□□□ 1.51
DNMT3A-210ENST00000474807 MCM10Q7L590 875 aa24.5■■□□□ 1.51
DNMT3A-210ENST00000474807 ADCY9O60503 1353 aa24.49■■□□□ 1.51
DNMT3A-210ENST00000474807 DCTN1Q14203 1278 aa24.48■■□□□ 1.51
DNMT3A-210ENST00000474807 NFIXQ14938 502 aa24.48■■□□□ 1.51
DNMT3A-210ENST00000474807 ATP10DQ9P241 1426 aa24.48■■□□□ 1.51
DNMT3A-210ENST00000474807 BCS1LQ9Y276 419 aa24.48■■□□□ 1.51
DNMT3A-210ENST00000474807 IL6STP40189 918 aaPredicted RBP24.46■■□□□ 1.51
DNMT3A-210ENST00000474807 PLEKHF1Q96S99 279 aa24.46■■□□□ 1.51
DNMT3A-210ENST00000474807 NRXN2Q9P2S2 1712 aa24.46■■□□□ 1.51
DNMT3A-210ENST00000474807 AFDNP55196 1824 aaKnown RBP24.45■■□□□ 1.5
DNMT3A-210ENST00000474807 A0A087WZG4 1122 aa24.45■■□□□ 1.5
DNMT3A-210ENST00000474807 A1BGP04217 495 aa24.44■■□□□ 1.5
DNMT3A-210ENST00000474807 C1QTNF8P60827 252 aa24.44■■□□□ 1.5
DNMT3A-210ENST00000474807 PIM2Q9P1W9 311 aa24.44■■□□□ 1.5
DNMT3A-210ENST00000474807 GIGYF1O75420 1035 aaPredicted RBP24.43■■□□□ 1.5
DNMT3A-210ENST00000474807 RALBP1Q15311 655 aa24.43■■□□□ 1.5
DNMT3A-210ENST00000474807 USP16Q9Y5T5 823 aa24.43■■□□□ 1.5
DNMT3A-210ENST00000474807 SERPINB2P05120 415 aa24.42■■□□□ 1.5
DNMT3A-210ENST00000474807 DLG5Q8TDM6 1919 aa24.41■■□□□ 1.5
DNMT3A-210ENST00000474807 SCN7AQ01118 1682 aa24.41■■□□□ 1.5
DNMT3A-210ENST00000474807 ARFGEF1Q9Y6D6 1849 aa24.41■■□□□ 1.5
DNMT3A-210ENST00000474807 PRAMEF22A3QJZ6 481 aa24.41■■□□□ 1.5
DNMT3A-210ENST00000474807 NEFMP07197 916 aa24.41■■□□□ 1.5
DNMT3A-210ENST00000474807 CHRNA5P30532 468 aa24.41■■□□□ 1.5
DNMT3A-210ENST00000474807 DDX10Q13206 875 aaKnown RBP24.41■■□□□ 1.5
DNMT3A-210ENST00000474807 TAF7Q15545 349 aaPredicted RBP24.41■■□□□ 1.5
DNMT3A-210ENST00000474807 TBC1D2BQ9UPU7 963 aa24.41■■□□□ 1.5
DNMT3A-210ENST00000474807 SNRPA1P09661 255 aaKnown RBP24.4■■□□□ 1.5
DNMT3A-210ENST00000474807 ZNF330Q9Y3S2 320 aaPredicted RBP24.4■■□□□ 1.5
DNMT3A-210ENST00000474807 DALRD3Q5D0E6 543 aaKnown RBP24.39■■□□□ 1.49
DNMT3A-210ENST00000474807 TBC1D9BQ66K14 1250 aa24.39■■□□□ 1.49
DNMT3A-210ENST00000474807 ARHGAP27Q6ZUM4 889 aa24.39■■□□□ 1.49
DNMT3A-210ENST00000474807 NFE2L2Q16236 605 aa24.38■■□□□ 1.49
DNMT3A-210ENST00000474807 BICDL1Q6ZP65 573 aa24.38■■□□□ 1.49
DNMT3A-210ENST00000474807 PNNQ9H307 717 aaKnown RBP24.38■■□□□ 1.49
DNMT3A-210ENST00000474807 GPBP1L1Q9HC44 474 aaPredicted RBP24.38■■□□□ 1.49
DNMT3A-210ENST00000474807 MIS18AQ9NYP9 233 aa24.37■■□□□ 1.49
DNMT3A-210ENST00000474807 CAMTA2O94983 1202 aa24.36■■□□□ 1.49
DNMT3A-210ENST00000474807 PIP4K2AP48426 406 aaPredicted RBP24.36■■□□□ 1.49
DNMT3A-210ENST00000474807 CARMIL3Q8ND23 1372 aa24.35■■□□□ 1.49
DNMT3A-210ENST00000474807 NPM2Q86SE8 214 aaKnown RBP24.35■■□□□ 1.49
DNMT3A-210ENST00000474807 ZNF526Q8TF50 670 aaPredicted RBP24.35■■□□□ 1.49
DNMT3A-210ENST00000474807 BCORQ6W2J9 1755 aa24.34■■□□□ 1.49
DNMT3A-210ENST00000474807 DZIP3Q86Y13 1208 aaKnown RBP24.34■■□□□ 1.49
DNMT3A-210ENST00000474807 KDM3BQ7LBC6 1761 aa24.34■■□□□ 1.49
DNMT3A-210ENST00000474807 MAPK8IP3Q9UPT6 1336 aa24.34■■□□□ 1.49
DNMT3A-210ENST00000474807 PNISRQ8TF01 805 aaKnown RBP24.33■■□□□ 1.49
DNMT3A-210ENST00000474807 DLEC1Q9Y238 1755 aa24.33■■□□□ 1.49
DNMT3A-210ENST00000474807 NBPF26B4DH59 902 aa24.32■■□□□ 1.48
DNMT3A-210ENST00000474807 NBPF10Q6P3W6 841 aaKnown RBP24.32■■□□□ 1.48
DNMT3A-210ENST00000474807 NBPF15Q8N660 670 aa24.32■■□□□ 1.48
DNMT3A-210ENST00000474807 MYBBP1AQ9BQG0 1328 aaKnown RBP24.32■■□□□ 1.48
DNMT3A-210ENST00000474807 THUMPD2Q9BTF0 503 aaKnown RBP24.31■■□□□ 1.48
DNMT3A-210ENST00000474807 PRR5LQ6MZQ0 368 aa24.3■■□□□ 1.48
DNMT3A-210ENST00000474807 C2CD5Q86YS7 1000 aa24.3■■□□□ 1.48
DNMT3A-210ENST00000474807 SETDB2Q96T68 719 aa24.3■■□□□ 1.48
DNMT3A-210ENST00000474807 ANKRD31Q8N7Z5 1873 aa24.3■■□□□ 1.48
DNMT3A-210ENST00000474807 LAMB4A4D0S4 1761 aa24.29■■□□□ 1.48
DNMT3A-210ENST00000474807 EIF4A1P60842 406 aaKnown RBP24.29■■□□□ 1.48
DNMT3A-210ENST00000474807 SENP3-EIF4A1A0A087X0R7 540 aa24.28■■□□□ 1.48
DNMT3A-210ENST00000474807 H0YIN7 160 aa24.28■■□□□ 1.48
DNMT3A-210ENST00000474807 C9orf131Q5VYM1 1079 aa24.28■■□□□ 1.48
DNMT3A-210ENST00000474807 CLEC4GQ6UXB4 293 aa24.28■■□□□ 1.48
DNMT3A-210ENST00000474807 BRIP1Q9BX63 1249 aa24.28■■□□□ 1.48
DNMT3A-210ENST00000474807 CCDC24Q8N4L8 307 aa24.27■■□□□ 1.48
DNMT3A-210ENST00000474807 TTLL6Q8N841 843 aa24.27■■□□□ 1.48
DNMT3A-210ENST00000474807 RGL2O15211 777 aa24.26■■□□□ 1.47
DNMT3A-210ENST00000474807 RIPK4P57078 832 aa24.26■■□□□ 1.47
DNMT3A-210ENST00000474807 PDZRN3Q9UPQ7 1066 aa24.26■■□□□ 1.47
DNMT3A-210ENST00000474807 KIF3CO14782 793 aa24.25■■□□□ 1.47
DNMT3A-210ENST00000474807 PDE6BP35913 854 aa24.25■■□□□ 1.47
DNMT3A-210ENST00000474807 ZNF652Q9Y2D9 606 aa24.25■■□□□ 1.47
DNMT3A-210ENST00000474807 SBF1O95248 1867 aa24.24■■□□□ 1.47
DNMT3A-210ENST00000474807 TMPOP42166 694 aaKnown RBP24.24■■□□□ 1.47
DNMT3A-210ENST00000474807 CNBD1Q8NA66 436 aa24.24■■□□□ 1.47
DNMT3A-210ENST00000474807 COL11A2P13942 1736 aaPredicted RBP24.23■■□□□ 1.47
DNMT3A-210ENST00000474807 RNF181Q9P0P0 153 aa24.22■■□□□ 1.47
DNMT3A-210ENST00000474807 ST5P78524 1137 aa24.21■■□□□ 1.47
DNMT3A-210ENST00000474807 RASSF7Q02833 373 aa24.2■■□□□ 1.46
DNMT3A-210ENST00000474807 HLFQ16534 295 aa24.2■■□□□ 1.46
DNMT3A-210ENST00000474807 ZNF622Q969S3 477 aaKnown RBP eCLIP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms