RNA–Protein interactions for RNA: ENST00000474743.5

SH3D19-206, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-206ENST00000474743 ZNF827Q17R98 1081 aa11.33□□□□□ -0.6
SH3D19-206ENST00000474743 ERVV-2B6SEH9 535 aa11.32□□□□□ -0.6
SH3D19-206ENST00000474743 U2SURPO15042 1029 aaKnown RBP11.32□□□□□ -0.6
SH3D19-206ENST00000474743 PIGBQ92521 554 aa11.32□□□□□ -0.6
SH3D19-206ENST00000474743 KDM6AO15550 1401 aaPredicted RBP11.32□□□□□ -0.6
SH3D19-206ENST00000474743 HMOX1P09601 288 aa11.31□□□□□ -0.6
SH3D19-206ENST00000474743 SLC16A10Q8TF71 515 aa11.31□□□□□ -0.6
SH3D19-206ENST00000474743 AK7Q96M32 723 aa11.31□□□□□ -0.6
SH3D19-206ENST00000474743 NUDCQ9Y266 331 aa11.31□□□□□ -0.6
SH3D19-206ENST00000474743 UBR3Q6ZT12 1888 aa11.31□□□□□ -0.6
SH3D19-206ENST00000474743 MRC1P22897 1456 aa11.31□□□□□ -0.6
SH3D19-206ENST00000474743 COL24A1Q17RW2 1714 aa11.3□□□□□ -0.6
SH3D19-206ENST00000474743 LOC102724428A0A0B4J2F2 783 aa11.3□□□□□ -0.6
SH3D19-206ENST00000474743 POLD1P28340 1107 aa11.3□□□□□ -0.6
SH3D19-206ENST00000474743 KCNQ4P56696 695 aa11.3□□□□□ -0.6
SH3D19-206ENST00000474743 SIK1P57059 783 aa11.3□□□□□ -0.6
SH3D19-206ENST00000474743 CABP4P57796 275 aa11.3□□□□□ -0.6
SH3D19-206ENST00000474743 AKAP4Q5JQC9 854 aa11.3□□□□□ -0.6
SH3D19-206ENST00000474743 IFNL1Q8IU54 200 aa11.3□□□□□ -0.6
SH3D19-206ENST00000474743 FLAD1Q8NFF5 587 aa11.3□□□□□ -0.6
SH3D19-206ENST00000474743 PDGFDQ9GZP0 370 aaPredicted RBP11.3□□□□□ -0.6
SH3D19-206ENST00000474743 PNPLA7Q6ZV29 1317 aa11.3□□□□□ -0.6
SH3D19-206ENST00000474743 COL5A3P25940 1745 aaPredicted RBP11.29□□□□□ -0.6
SH3D19-206ENST00000474743 CICQ96RK0 1608 aaPredicted RBP11.29□□□□□ -0.6
SH3D19-206ENST00000474743 MIER1Q8N108 512 aa11.29□□□□□ -0.6
SH3D19-206ENST00000474743 ADAMTS7Q9UKP4 1686 aa11.29□□□□□ -0.6
SH3D19-206ENST00000474743 PPP2R1AP30153 589 aa11.28□□□□□ -0.6
SH3D19-206ENST00000474743 ZEB1P37275 1124 aaPredicted RBP11.28□□□□□ -0.6
SH3D19-206ENST00000474743 GAS2L2Q8NHY3 880 aa11.28□□□□□ -0.6
SH3D19-206ENST00000474743 ASAP1Q9ULH1 1129 aa11.28□□□□□ -0.6
SH3D19-206ENST00000474743 MAP3K5Q99683 1374 aa11.28□□□□□ -0.6
SH3D19-206ENST00000474743 ATP6V1AP38606 617 aa11.27□□□□□ -0.61
SH3D19-206ENST00000474743 PTGER2P43116 358 aa11.27□□□□□ -0.61
SH3D19-206ENST00000474743 ATG3Q9NT62 314 aa11.27□□□□□ -0.61
SH3D19-206ENST00000474743 NEFMP07197 916 aa11.26□□□□□ -0.61
SH3D19-206ENST00000474743 ARXQ96QS3 562 aa11.26□□□□□ -0.61
SH3D19-206ENST00000474743 PHF14O94880 888 aa11.25□□□□□ -0.61
SH3D19-206ENST00000474743 U2AF1L5P0DN76 240 aaPredicted RBP11.25□□□□□ -0.61
SH3D19-206ENST00000474743 SSFA2P28290 1259 aa11.25□□□□□ -0.61
SH3D19-206ENST00000474743 U2AF1Q01081 240 aaKnown RBP eCLIP11.25□□□□□ -0.61
SH3D19-206ENST00000474743 C3orf67Q6ZVT6 689 aa11.25□□□□□ -0.61
SH3D19-206ENST00000474743 SLC52A2Q9HAB3 445 aa11.25□□□□□ -0.61
SH3D19-206ENST00000474743 TJP1Q07157 1748 aa11.25□□□□□ -0.61
SH3D19-206ENST00000474743 UBR2Q8IWV8 1755 aa11.25□□□□□ -0.61
SH3D19-206ENST00000474743 GNPATO15228 680 aa11.24□□□□□ -0.61
SH3D19-206ENST00000474743 PRKAR2BP31323 418 aa11.24□□□□□ -0.61
SH3D19-206ENST00000474743 MTHFSDQ2M296 383 aaKnown RBP11.24□□□□□ -0.61
SH3D19-206ENST00000474743 NFATC2IPQ8NCF5 419 aa11.24□□□□□ -0.61
SH3D19-206ENST00000474743 LINC00116Q8NCU8 138 aa11.24□□□□□ -0.61
SH3D19-206ENST00000474743 CNTNAP4Q9C0A0 1308 aa11.24□□□□□ -0.61
SH3D19-206ENST00000474743 C4AP0C0L4 1744 aa11.23□□□□□ -0.61
SH3D19-206ENST00000474743 SIPA1L3O60292 1781 aaPredicted RBP11.23□□□□□ -0.61
SH3D19-206ENST00000474743 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.23□□□□□ -0.61
SH3D19-206ENST00000474743 GNAT3A8MTJ3 354 aa11.23□□□□□ -0.61
SH3D19-206ENST00000474743 RNMTO43148 476 aaKnown RBP11.23□□□□□ -0.61
SH3D19-206ENST00000474743 TEFQ10587 303 aa11.23□□□□□ -0.61
SH3D19-206ENST00000474743 ITPK1Q13572 414 aa11.23□□□□□ -0.61
SH3D19-206ENST00000474743 RALBP1Q15311 655 aa11.23□□□□□ -0.61
SH3D19-206ENST00000474743 COL23A1Q86Y22 540 aaPredicted RBP11.23□□□□□ -0.61
SH3D19-206ENST00000474743 KLHL34Q8N239 644 aa11.23□□□□□ -0.61
SH3D19-206ENST00000474743 FHDC1Q9C0D6 1143 aaPredicted RBP11.23□□□□□ -0.61
SH3D19-206ENST00000474743 PTCD1O75127 700 aaKnown RBP11.22□□□□□ -0.61
SH3D19-206ENST00000474743 TTC5Q8N0Z6 440 aa11.22□□□□□ -0.61
SH3D19-206ENST00000474743 RSPH6AQ9H0K4 717 aa11.22□□□□□ -0.61
SH3D19-206ENST00000474743 RTCBQ9Y3I0 505 aaKnown RBP11.22□□□□□ -0.61
SH3D19-206ENST00000474743 KCPQ6ZWJ8 1503 aa11.21□□□□□ -0.61
SH3D19-206ENST00000474743 FCHSD2O94868 740 aa11.21□□□□□ -0.61
SH3D19-206ENST00000474743 MSL1Q68DK7 614 aa11.21□□□□□ -0.61
SH3D19-206ENST00000474743 RTF1Q92541 710 aaKnown RBP11.21□□□□□ -0.61
SH3D19-206ENST00000474743 PNNQ9H307 717 aaKnown RBP11.21□□□□□ -0.61
SH3D19-206ENST00000474743 MAPK8IP3Q9UPT6 1336 aa11.2□□□□□ -0.62
SH3D19-206ENST00000474743 MYH14Q7Z406 1995 aaKnown RBP11.2□□□□□ -0.62
SH3D19-206ENST00000474743 DDX10Q13206 875 aaKnown RBP11.2□□□□□ -0.62
SH3D19-206ENST00000474743 RC3H1Q5TC82 1133 aaKnown RBP11.2□□□□□ -0.62
SH3D19-206ENST00000474743 PLCD3Q8N3E9 789 aa11.2□□□□□ -0.62
SH3D19-206ENST00000474743 SYT17Q9BSW7 474 aa11.2□□□□□ -0.62
SH3D19-206ENST00000474743 MYBBP1AQ9BQG0 1328 aaKnown RBP11.19□□□□□ -0.62
SH3D19-206ENST00000474743 LGR6Q9HBX8 967 aa11.19□□□□□ -0.62
SH3D19-206ENST00000474743 DLG5Q8TDM6 1919 aa11.19□□□□□ -0.62
SH3D19-206ENST00000474743 CEMIPQ8WUJ3 1361 aa11.18□□□□□ -0.62
SH3D19-206ENST00000474743 RFC4P35249 363 aa11.18□□□□□ -0.62
SH3D19-206ENST00000474743 CRKLP46109 303 aaKnown RBP11.18□□□□□ -0.62
SH3D19-206ENST00000474743 TRAPPC3LQ5T215 181 aa11.18□□□□□ -0.62
SH3D19-206ENST00000474743 CHD4Q14839 1912 aa11.17□□□□□ -0.62
SH3D19-206ENST00000474743 RPS6KA4O75676 772 aa11.17□□□□□ -0.62
SH3D19-206ENST00000474743 VSIG10Q8N0Z9 540 aa11.17□□□□□ -0.62
SH3D19-206ENST00000474743 PHACTR3Q96KR7 559 aa11.17□□□□□ -0.62
SH3D19-206ENST00000474743 SLC4A9Q96Q91 983 aa11.17□□□□□ -0.62
SH3D19-206ENST00000474743 STARD3NLO95772 234 aa11.16□□□□□ -0.62
SH3D19-206ENST00000474743 SLC39A6Q13433 755 aa11.16□□□□□ -0.62
SH3D19-206ENST00000474743 AMIGO3Q86WK7 504 aa11.16□□□□□ -0.62
SH3D19-206ENST00000474743 CCDC87Q9NVE4 849 aa11.16□□□□□ -0.62
SH3D19-206ENST00000474743 LAMB4A4D0S4 1761 aa11.16□□□□□ -0.62
SH3D19-206ENST00000474743 KIF13BQ9NQT8 1826 aa11.15□□□□□ -0.62
SH3D19-206ENST00000474743 HTATSF1O43719 755 aaKnown RBP11.15□□□□□ -0.62
SH3D19-206ENST00000474743 ZNF790Q6PG37 636 aa11.15□□□□□ -0.62
SH3D19-206ENST00000474743 DNAJC10Q8IXB1 793 aa11.15□□□□□ -0.62
SH3D19-206ENST00000474743 NLGN1Q8N2Q7 840 aa11.15□□□□□ -0.62
SH3D19-206ENST00000474743 IL17REQ8NFR9 667 aa11.15□□□□□ -0.62
SH3D19-206ENST00000474743 L3MBTL3Q96JM7 780 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms