RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 ZC3H4Q9UPT8 1303 aaKnown RBP15.66■□□□□ 0.1
EXOSC1-207ENST00000474309 ADAMTS7Q9UKP4 1686 aa15.65■□□□□ 0.1
EXOSC1-207ENST00000474309 SLC39A6Q13433 755 aa15.65■□□□□ 0.1
EXOSC1-207ENST00000474309 RRAGCQ9HB90 399 aa15.65■□□□□ 0.1
EXOSC1-207ENST00000474309 NFIXQ14938 502 aa15.64■□□□□ 0.09
EXOSC1-207ENST00000474309 SERPINB2P05120 415 aa15.63■□□□□ 0.09
EXOSC1-207ENST00000474309 MTHFSDQ2M296 383 aaKnown RBP15.62■□□□□ 0.09
EXOSC1-207ENST00000474309 TTLL6Q8N841 843 aa15.62■□□□□ 0.09
EXOSC1-207ENST00000474309 JMYQ8N9B5 988 aa15.62■□□□□ 0.09
EXOSC1-207ENST00000474309 KLRG1Q96E93 195 aa15.62■□□□□ 0.09
EXOSC1-207ENST00000474309 BCL2L12Q9HB09 334 aa15.62■□□□□ 0.09
EXOSC1-207ENST00000474309 ZBTB1Q9Y2K1 713 aa15.62■□□□□ 0.09
EXOSC1-207ENST00000474309 MRC1P22897 1456 aa15.62■□□□□ 0.09
EXOSC1-207ENST00000474309 KCPQ6ZWJ8 1503 aa15.62■□□□□ 0.09
EXOSC1-207ENST00000474309 COL15A1P39059 1388 aa15.62■□□□□ 0.09
EXOSC1-207ENST00000474309 AFDNP55196 1824 aaKnown RBP15.61■□□□□ 0.09
EXOSC1-207ENST00000474309 A0A087WZG4 1122 aa15.61■□□□□ 0.09
EXOSC1-207ENST00000474309 PER1O15534 1290 aaPredicted RBP15.61■□□□□ 0.09
EXOSC1-207ENST00000474309 DIAPH1O60610 1272 aaKnown RBP15.61■□□□□ 0.09
EXOSC1-207ENST00000474309 HMOX1P09601 288 aa15.61■□□□□ 0.09
EXOSC1-207ENST00000474309 LMNB1P20700 586 aa15.61■□□□□ 0.09
EXOSC1-207ENST00000474309 PDZRN3Q9UPQ7 1066 aa15.61■□□□□ 0.09
EXOSC1-207ENST00000474309 VIRMAQ69YN4 1812 aaKnown RBP15.61■□□□□ 0.09
EXOSC1-207ENST00000474309 NRXN2Q9P2S2 1712 aa15.6■□□□□ 0.09
EXOSC1-207ENST00000474309 GLTPD2A6NH11 291 aa15.6■□□□□ 0.09
EXOSC1-207ENST00000474309 STARD3NLO95772 234 aa15.6■□□□□ 0.09
EXOSC1-207ENST00000474309 EIF5P55010 431 aaKnown RBP15.6■□□□□ 0.09
EXOSC1-207ENST00000474309 SMC1BQ8NDV3 1235 aa15.6■□□□□ 0.09
EXOSC1-207ENST00000474309 TEX13AQ9BXU3 409 aaPredicted RBP15.6■□□□□ 0.09
EXOSC1-207ENST00000474309 WDR90Q96KV7 1748 aa15.6■□□□□ 0.09
EXOSC1-207ENST00000474309 H0YIN7 160 aa15.59■□□□□ 0.09
EXOSC1-207ENST00000474309 VEGFAP15692 232 aaPredicted RBP15.59■□□□□ 0.09
EXOSC1-207ENST00000474309 CANXP27824 592 aaKnown RBP15.58■□□□□ 0.08
EXOSC1-207ENST00000474309 C2CD5Q86YS7 1000 aa15.58■□□□□ 0.08
EXOSC1-207ENST00000474309 TTC5Q8N0Z6 440 aa15.58■□□□□ 0.08
EXOSC1-207ENST00000474309 TNRC6CQ9HCJ0 1690 aaKnown RBP15.57■□□□□ 0.08
EXOSC1-207ENST00000474309 CCDC88AQ3V6T2 1871 aa15.57■□□□□ 0.08
EXOSC1-207ENST00000474309 RASSF7Q02833 373 aa15.57■□□□□ 0.08
EXOSC1-207ENST00000474309 HTRA3P83110 453 aa15.56■□□□□ 0.08
EXOSC1-207ENST00000474309 ZNF790Q6PG37 636 aa15.56■□□□□ 0.08
EXOSC1-207ENST00000474309 BRIP1Q9BX63 1249 aa15.56■□□□□ 0.08
EXOSC1-207ENST00000474309 KIF7Q2M1P5 1343 aa15.56■□□□□ 0.08
EXOSC1-207ENST00000474309 DLEC1Q9Y238 1755 aa15.55■□□□□ 0.08
EXOSC1-207ENST00000474309 GNAT3A8MTJ3 354 aa15.55■□□□□ 0.08
EXOSC1-207ENST00000474309 PDE6BP35913 854 aa15.55■□□□□ 0.08
EXOSC1-207ENST00000474309 PRELPP51888 382 aa15.55■□□□□ 0.08
EXOSC1-207ENST00000474309 TEFQ10587 303 aa15.55■□□□□ 0.08
EXOSC1-207ENST00000474309 DPY19L2Q6NUT2 758 aa15.55■□□□□ 0.08
EXOSC1-207ENST00000474309 IL17REQ8NFR9 667 aa15.55■□□□□ 0.08
EXOSC1-207ENST00000474309 GAS2L2Q8NHY3 880 aa15.55■□□□□ 0.08
EXOSC1-207ENST00000474309 IL6STP40189 918 aaPredicted RBP15.54■□□□□ 0.08
EXOSC1-207ENST00000474309 CCER1Q8TC90 406 aaPredicted RBP15.54■□□□□ 0.08
EXOSC1-207ENST00000474309 ZNF496Q96IT1 587 aaPredicted RBP15.54■□□□□ 0.08
EXOSC1-207ENST00000474309 UBR2Q8IWV8 1755 aa15.54■□□□□ 0.08
EXOSC1-207ENST00000474309 NPC1L1Q9UHC9 1359 aa15.53■□□□□ 0.08
EXOSC1-207ENST00000474309 HEG1Q9ULI3 1381 aa15.53■□□□□ 0.08
EXOSC1-207ENST00000474309 NFKBIEO00221 500 aa15.53■□□□□ 0.08
EXOSC1-207ENST00000474309 CC2D1BQ5T0F9 858 aaKnown RBP15.53■□□□□ 0.08
EXOSC1-207ENST00000474309 TBC1D9BQ66K14 1250 aa15.53■□□□□ 0.08
EXOSC1-207ENST00000474309 BICDL1Q6ZP65 573 aa15.53■□□□□ 0.08
EXOSC1-207ENST00000474309 POTECB2RU33 542 aa15.52■□□□□ 0.08
EXOSC1-207ENST00000474309 ZNF622Q969S3 477 aaKnown RBP eCLIP15.52■□□□□ 0.08
EXOSC1-207ENST00000474309 PRR5LQ6MZQ0 368 aa15.51■□□□□ 0.07
EXOSC1-207ENST00000474309 NPM2Q86SE8 214 aaKnown RBP15.51■□□□□ 0.07
EXOSC1-207ENST00000474309 FMNL2Q96PY5 1086 aa15.51■□□□□ 0.07
EXOSC1-207ENST00000474309 TBC1D2BQ9UPU7 963 aa15.51■□□□□ 0.07
EXOSC1-207ENST00000474309 DICER1Q9UPY3 1922 aaKnown RBP15.51■□□□□ 0.07
EXOSC1-207ENST00000474309 CARMIL3Q8ND23 1372 aa15.5■□□□□ 0.07
EXOSC1-207ENST00000474309 LTBP3Q9NS15 1303 aa15.5■□□□□ 0.07
EXOSC1-207ENST00000474309 U2SURPO15042 1029 aaKnown RBP15.5■□□□□ 0.07
EXOSC1-207ENST00000474309 COL13A1Q5TAT6 717 aaPredicted RBP15.5■□□□□ 0.07
EXOSC1-207ENST00000474309 CNKSR1Q969H4 720 aa15.5■□□□□ 0.07
EXOSC1-207ENST00000474309 SETDB2Q96T68 719 aa15.5■□□□□ 0.07
EXOSC1-207ENST00000474309 C21orf2O43822 256 aa15.49■□□□□ 0.07
EXOSC1-207ENST00000474309 A1BGP04217 495 aa15.49■□□□□ 0.07
EXOSC1-207ENST00000474309 ERFEQ4G0M1 354 aa15.49■□□□□ 0.07
EXOSC1-207ENST00000474309 CLEC4GQ6UXB4 293 aa15.49■□□□□ 0.07
EXOSC1-207ENST00000474309 CEMIPQ8WUJ3 1361 aa15.49■□□□□ 0.07
EXOSC1-207ENST00000474309 FER1L6Q2WGJ9 1857 aa15.48■□□□□ 0.07
EXOSC1-207ENST00000474309 ANKRD31Q8N7Z5 1873 aa15.48■□□□□ 0.07
EXOSC1-207ENST00000474309 CAMTA2O94983 1202 aa15.48■□□□□ 0.07
EXOSC1-207ENST00000474309 SOGA3Q5TF21 947 aa15.48■□□□□ 0.07
EXOSC1-207ENST00000474309 STYK1Q6J9G0 422 aa15.48■□□□□ 0.07
EXOSC1-207ENST00000474309 BTBD11A6QL63 1104 aa15.47■□□□□ 0.07
EXOSC1-207ENST00000474309 SRGNP10124 158 aa15.47■□□□□ 0.07
EXOSC1-207ENST00000474309 MASTLQ96GX5 879 aa15.47■□□□□ 0.07
EXOSC1-207ENST00000474309 ZNF330Q9Y3S2 320 aaPredicted RBP15.47■□□□□ 0.07
EXOSC1-207ENST00000474309 SIPA1L3O60292 1781 aaPredicted RBP15.47■□□□□ 0.07
EXOSC1-207ENST00000474309 COL3A1P02461 1466 aaPredicted RBP15.46■□□□□ 0.07
EXOSC1-207ENST00000474309 RGL2O15211 777 aa15.46■□□□□ 0.07
EXOSC1-207ENST00000474309 ST5P78524 1137 aa15.46■□□□□ 0.07
EXOSC1-207ENST00000474309 DZIP3Q86Y13 1208 aaKnown RBP15.46■□□□□ 0.07
EXOSC1-207ENST00000474309 CNBD1Q8NA66 436 aa15.46■□□□□ 0.07
EXOSC1-207ENST00000474309 TAOK3Q9H2K8 898 aa15.46■□□□□ 0.07
EXOSC1-207ENST00000474309 USP16Q9Y5T5 823 aa15.46■□□□□ 0.07
EXOSC1-207ENST00000474309 CCDC24Q8N4L8 307 aa15.45■□□□□ 0.06
EXOSC1-207ENST00000474309 PHACTR3Q96KR7 559 aa15.45■□□□□ 0.06
EXOSC1-207ENST00000474309 ZNF219Q9P2Y4 722 aaPredicted RBP15.45■□□□□ 0.06
EXOSC1-207ENST00000474309 PCNTO95613 3336 aa15.45■□□□□ 0.06
EXOSC1-207ENST00000474309 TIAM2Q8IVF5 1701 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms