RNA–Protein interactions for RNA: ENST00000474158.1

ABCC4-204, Transcript of ATP binding cassette subfamily C member 4, humanhuman

TSL 2

Gene ABCC4, Length 697 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4-204ENST00000474158 SIK1P57059 783 aa11.54□□□□□ -0.56
ABCC4-204ENST00000474158 NLGN1Q8N2Q7 840 aa11.54□□□□□ -0.56
ABCC4-204ENST00000474158 USHBP1Q8N6Y0 703 aa11.54□□□□□ -0.56
ABCC4-204ENST00000474158 LMNB1P20700 586 aa11.53□□□□□ -0.56
ABCC4-204ENST00000474158 ARHGEF1Q92888 912 aaKnown RBP11.53□□□□□ -0.56
ABCC4-204ENST00000474158 SMARCC1Q92922 1105 aaPredicted RBP11.53□□□□□ -0.56
ABCC4-204ENST00000474158 STAC3Q96MF2 364 aa11.53□□□□□ -0.56
ABCC4-204ENST00000474158 CYP27B1O15528 508 aa11.52□□□□□ -0.57
ABCC4-204ENST00000474158 HMGB2P26583 209 aaKnown RBP11.52□□□□□ -0.57
ABCC4-204ENST00000474158 NBPF6Q5VWK0 638 aa11.52□□□□□ -0.57
ABCC4-204ENST00000474158 NBPF4Q96M43 638 aa11.52□□□□□ -0.57
ABCC4-204ENST00000474158 TSKSQ9UJT2 592 aa11.52□□□□□ -0.57
ABCC4-204ENST00000474158 PARP3Q9Y6F1 533 aa11.52□□□□□ -0.57
ABCC4-204ENST00000474158 SBNO2Q9Y2G9 1366 aa11.52□□□□□ -0.57
ABCC4-204ENST00000474158 DICER1Q9UPY3 1922 aaKnown RBP11.51□□□□□ -0.57
ABCC4-204ENST00000474158 MYH14Q7Z406 1995 aaKnown RBP11.51□□□□□ -0.57
ABCC4-204ENST00000474158 TMEM88BA6NKF7 163 aa11.51□□□□□ -0.57
ABCC4-204ENST00000474158 ATN1P54259 1190 aaPredicted RBP11.51□□□□□ -0.57
ABCC4-204ENST00000474158 TRAPPC3LQ5T215 181 aa11.51□□□□□ -0.57
ABCC4-204ENST00000474158 RASEFQ8IZ41 740 aa11.51□□□□□ -0.57
ABCC4-204ENST00000474158 MCOLN1Q9GZU1 580 aa11.51□□□□□ -0.57
ABCC4-204ENST00000474158 ASAP1Q9ULH1 1129 aa11.51□□□□□ -0.57
ABCC4-204ENST00000474158 NFKBIEO00221 500 aa11.5□□□□□ -0.57
ABCC4-204ENST00000474158 ITGBL1O95965 494 aaPredicted RBP11.5□□□□□ -0.57
ABCC4-204ENST00000474158 ATP6V1AP38606 617 aa11.5□□□□□ -0.57
ABCC4-204ENST00000474158 DDR1Q08345 913 aa11.5□□□□□ -0.57
ABCC4-204ENST00000474158 EVC2Q86UK5 1308 aa11.5□□□□□ -0.57
ABCC4-204ENST00000474158 WDR33Q9C0J8 1336 aaKnown RBP11.5□□□□□ -0.57
ABCC4-204ENST00000474158 CD163L1Q9NR16 1453 aa11.5□□□□□ -0.57
ABCC4-204ENST00000474158 HOXC9P31274 260 aa11.49□□□□□ -0.57
ABCC4-204ENST00000474158 KIF12Q96FN5 646 aa11.49□□□□□ -0.57
ABCC4-204ENST00000474158 SLC4A9Q96Q91 983 aa11.49□□□□□ -0.57
ABCC4-204ENST00000474158 A0A0C4DFX4 3053 aa11.49□□□□□ -0.57
ABCC4-204ENST00000474158 MKI67P46013 3256 aaKnown RBP11.48□□□□□ -0.57
ABCC4-204ENST00000474158 RASSF10A6NK89 507 aa11.48□□□□□ -0.57
ABCC4-204ENST00000474158 MAP2K1Q02750 393 aaPredicted RBP11.48□□□□□ -0.57
ABCC4-204ENST00000474158 DEFB115Q30KQ5 88 aa11.48□□□□□ -0.57
ABCC4-204ENST00000474158 PRPF38BQ5VTL8 546 aaKnown RBP11.48□□□□□ -0.57
ABCC4-204ENST00000474158 RTCBQ9Y3I0 505 aaKnown RBP11.48□□□□□ -0.57
ABCC4-204ENST00000474158 MAP3K19Q56UN5 1328 aa11.48□□□□□ -0.57
ABCC4-204ENST00000474158 DDNO94850 711 aaPredicted RBP11.47□□□□□ -0.57
ABCC4-204ENST00000474158 DPY19L2Q6NUT2 758 aa11.47□□□□□ -0.57
ABCC4-204ENST00000474158 SRP68Q9UHB9 627 aaKnown RBP11.47□□□□□ -0.57
ABCC4-204ENST00000474158 LTBP1Q14766 1721 aa11.46□□□□□ -0.57
ABCC4-204ENST00000474158 PCDH11XQ9BZA7 1347 aa11.46□□□□□ -0.57
ABCC4-204ENST00000474158 PCDH11YQ9BZA8 1340 aa11.46□□□□□ -0.57
ABCC4-204ENST00000474158 SZT2Q5T011 3432 aa11.46□□□□□ -0.58
ABCC4-204ENST00000474158 AFDNP55196 1824 aaKnown RBP11.46□□□□□ -0.58
ABCC4-204ENST00000474158 COL5A3P25940 1745 aaPredicted RBP11.46□□□□□ -0.58
ABCC4-204ENST00000474158 THSD7BQ9C0I4 1608 aa11.46□□□□□ -0.58
ABCC4-204ENST00000474158 CGNL1Q0VF96 1302 aa11.45□□□□□ -0.58
ABCC4-204ENST00000474158 TATP17735 454 aaPredicted RBP11.45□□□□□ -0.58
ABCC4-204ENST00000474158 RFC4P35249 363 aa11.45□□□□□ -0.58
ABCC4-204ENST00000474158 SOX10P56693 466 aa11.45□□□□□ -0.58
ABCC4-204ENST00000474158 RAPGEF4Q8WZA2 1011 aa11.45□□□□□ -0.58
ABCC4-204ENST00000474158 FAM212AQ96EL1 285 aa11.45□□□□□ -0.58
ABCC4-204ENST00000474158 ATG3Q9NT62 314 aa11.45□□□□□ -0.58
ABCC4-204ENST00000474158 DLEC1Q9Y238 1755 aa11.45□□□□□ -0.58
ABCC4-204ENST00000474158 NUBP1P53384 320 aa11.44□□□□□ -0.58
ABCC4-204ENST00000474158 LDHDQ86WU2 507 aa11.44□□□□□ -0.58
ABCC4-204ENST00000474158 FER1L6Q2WGJ9 1857 aa11.44□□□□□ -0.58
ABCC4-204ENST00000474158 POLRMTO00411 1230 aaKnown RBP11.43□□□□□ -0.58
ABCC4-204ENST00000474158 AMPHP49418 695 aa11.43□□□□□ -0.58
ABCC4-204ENST00000474158 DGKZQ13574 1117 aa11.43□□□□□ -0.58
ABCC4-204ENST00000474158 ERFEQ4G0M1 354 aa11.43□□□□□ -0.58
ABCC4-204ENST00000474158 KDRP35968 1356 aa11.42□□□□□ -0.58
ABCC4-204ENST00000474158 SCN4AP35499 1836 aa11.42□□□□□ -0.58
ABCC4-204ENST00000474158 ADAMTSL1Q8N6G6 1762 aa11.42□□□□□ -0.58
ABCC4-204ENST00000474158 MAP3K13O43283 966 aa11.42□□□□□ -0.58
ABCC4-204ENST00000474158 RPS6KA4O75676 772 aa11.42□□□□□ -0.58
ABCC4-204ENST00000474158 FMR1Q06787 632 aaKnown RBP eCLIP11.42□□□□□ -0.58
ABCC4-204ENST00000474158 NKX1-1Q15270 411 aaPredicted RBP11.42□□□□□ -0.58
ABCC4-204ENST00000474158 CDAN1Q8IWY9 1227 aa11.42□□□□□ -0.58
ABCC4-204ENST00000474158 TAF1DQ9H5J8 278 aaPredicted RBP11.42□□□□□ -0.58
ABCC4-204ENST00000474158 POTEFA5A3E0 1075 aa11.41□□□□□ -0.58
ABCC4-204ENST00000474158 TM4SF1P30408 202 aa11.41□□□□□ -0.58
ABCC4-204ENST00000474158 GRM1Q13255 1194 aa11.41□□□□□ -0.58
ABCC4-204ENST00000474158 CYP4F22Q6NT55 531 aa11.41□□□□□ -0.58
ABCC4-204ENST00000474158 CAPNS2Q96L46 248 aa11.41□□□□□ -0.58
ABCC4-204ENST00000474158 SLC12A5Q9H2X9 1139 aa11.41□□□□□ -0.58
ABCC4-204ENST00000474158 ABT1Q9ULW3 272 aaKnown RBP11.41□□□□□ -0.58
ABCC4-204ENST00000474158 AOC2O75106 756 aa11.4□□□□□ -0.58
ABCC4-204ENST00000474158 RRS1Q15050 365 aaKnown RBP11.4□□□□□ -0.58
ABCC4-204ENST00000474158 RC3H1Q5TC82 1133 aaKnown RBP11.4□□□□□ -0.58
ABCC4-204ENST00000474158 MAP1SQ66K74 1059 aaPredicted RBP11.4□□□□□ -0.58
ABCC4-204ENST00000474158 TTLL6Q8N841 843 aa11.4□□□□□ -0.58
ABCC4-204ENST00000474158 GPR101Q96P66 508 aaPredicted RBP11.4□□□□□ -0.58
ABCC4-204ENST00000474158 TMOD3Q9NYL9 352 aa11.4□□□□□ -0.58
ABCC4-204ENST00000474158 ADAMTS7Q9UKP4 1686 aa11.4□□□□□ -0.59
ABCC4-204ENST00000474158 EAPPQ56P03 285 aaPredicted RBP11.39□□□□□ -0.59
ABCC4-204ENST00000474158 EDC4Q6P2E9 1401 aaKnown RBP11.39□□□□□ -0.59
ABCC4-204ENST00000474158 BEGAINQ9BUH8 593 aa11.39□□□□□ -0.59
ABCC4-204ENST00000474158 BMP2KQ9NSY1 1161 aaPredicted RBP11.39□□□□□ -0.59
ABCC4-204ENST00000474158 CNTNAP4Q9C0A0 1308 aa11.38□□□□□ -0.59
ABCC4-204ENST00000474158 USP42Q9H9J4 1324 aaKnown RBP11.38□□□□□ -0.59
ABCC4-204ENST00000474158 CNTROBQ8N137 903 aa11.38□□□□□ -0.59
ABCC4-204ENST00000474158 TMC1Q8TDI8 760 aa11.38□□□□□ -0.59
ABCC4-204ENST00000474158 ZNF831Q5JPB2 1677 aa11.38□□□□□ -0.59
ABCC4-204ENST00000474158 NRXN2Q9P2S2 1712 aa11.38□□□□□ -0.59
ABCC4-204ENST00000474158 TIE1P35590 1138 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms