RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 GAS2L2Q8NHY3 880 aa16.03■□□□□ 0.16
SMPD4-217ENST00000473720 ZBTB1Q9Y2K1 713 aa16.03■□□□□ 0.16
SMPD4-217ENST00000473720 COL15A1P39059 1388 aa16.02■□□□□ 0.16
SMPD4-217ENST00000473720 GPBP1L1Q9HC44 474 aaPredicted RBP16.02■□□□□ 0.16
SMPD4-217ENST00000473720 ZNF330Q9Y3S2 320 aaPredicted RBP16.02■□□□□ 0.16
SMPD4-217ENST00000473720 SOS1Q07889 1333 aaPredicted RBP16.01■□□□□ 0.15
SMPD4-217ENST00000473720 FCHSD2O94868 740 aa16.01■□□□□ 0.15
SMPD4-217ENST00000473720 DDR1Q08345 913 aa16.01■□□□□ 0.15
SMPD4-217ENST00000473720 IL17REQ8NFR9 667 aa16.01■□□□□ 0.15
SMPD4-217ENST00000473720 PHACTR3Q96KR7 559 aa16.01■□□□□ 0.15
SMPD4-217ENST00000473720 NUDCQ9Y266 331 aa16.01■□□□□ 0.15
SMPD4-217ENST00000473720 U2AF1L5P0DN76 240 aaPredicted RBP16■□□□□ 0.15
SMPD4-217ENST00000473720 PPP2R1AP30153 589 aa16■□□□□ 0.15
SMPD4-217ENST00000473720 U2AF1Q01081 240 aaKnown RBP eCLIP16■□□□□ 0.15
SMPD4-217ENST00000473720 ARHGAP27Q6ZUM4 889 aa16■□□□□ 0.15
SMPD4-217ENST00000473720 DLEC1Q9Y238 1755 aa16■□□□□ 0.15
SMPD4-217ENST00000473720 NRXN2Q9P2S2 1712 aa15.99■□□□□ 0.15
SMPD4-217ENST00000473720 RSPH6AQ9H0K4 717 aa15.99■□□□□ 0.15
SMPD4-217ENST00000473720 POLRMTO00411 1230 aaKnown RBP15.98■□□□□ 0.15
SMPD4-217ENST00000473720 CHRNA5P30532 468 aa15.98■□□□□ 0.15
SMPD4-217ENST00000473720 ZNF790Q6PG37 636 aa15.98■□□□□ 0.15
SMPD4-217ENST00000473720 VSIG10Q8N0Z9 540 aa15.98■□□□□ 0.15
SMPD4-217ENST00000473720 ANKRD31Q8N7Z5 1873 aa15.98■□□□□ 0.15
SMPD4-217ENST00000473720 ZNF496Q96IT1 587 aaPredicted RBP15.98■□□□□ 0.15
SMPD4-217ENST00000473720 SCN7AQ01118 1682 aa15.98■□□□□ 0.15
SMPD4-217ENST00000473720 ADCY9O60503 1353 aa15.98■□□□□ 0.15
SMPD4-217ENST00000473720 STARD3NLO95772 234 aa15.97■□□□□ 0.15
SMPD4-217ENST00000473720 BICDL1Q6ZP65 573 aa15.97■□□□□ 0.15
SMPD4-217ENST00000473720 NARFQ9UHQ1 456 aa15.97■□□□□ 0.15
SMPD4-217ENST00000473720 BCORQ6W2J9 1755 aa15.97■□□□□ 0.15
SMPD4-217ENST00000473720 HEG1Q9ULI3 1381 aa15.97■□□□□ 0.15
SMPD4-217ENST00000473720 BTBD11A6QL63 1104 aa15.96■□□□□ 0.15
SMPD4-217ENST00000473720 KCNQ3O43525 872 aa15.96■□□□□ 0.15
SMPD4-217ENST00000473720 KCNA3P22001 575 aa15.96■□□□□ 0.15
SMPD4-217ENST00000473720 TM4SF1P30408 202 aa15.96■□□□□ 0.15
SMPD4-217ENST00000473720 NFIXQ14938 502 aa15.96■□□□□ 0.15
SMPD4-217ENST00000473720 RTF1Q92541 710 aaKnown RBP15.96■□□□□ 0.15
SMPD4-217ENST00000473720 PIM2Q9P1W9 311 aa15.96■□□□□ 0.15
SMPD4-217ENST00000473720 MCM10Q7L590 875 aa15.95■□□□□ 0.14
SMPD4-217ENST00000473720 FMNL2Q96PY5 1086 aa15.95■□□□□ 0.14
SMPD4-217ENST00000473720 DCTN1Q14203 1278 aa15.94■□□□□ 0.14
SMPD4-217ENST00000473720 BCL2L12Q9HB09 334 aa15.94■□□□□ 0.14
SMPD4-217ENST00000473720 TBC1D2BQ9UPU7 963 aa15.94■□□□□ 0.14
SMPD4-217ENST00000473720 CEMIPQ8WUJ3 1361 aa15.93■□□□□ 0.14
SMPD4-217ENST00000473720 A1BGP04217 495 aa15.93■□□□□ 0.14
SMPD4-217ENST00000473720 SERPINB2P05120 415 aa15.93■□□□□ 0.14
SMPD4-217ENST00000473720 PIP4K2AP48426 406 aaPredicted RBP15.93■□□□□ 0.14
SMPD4-217ENST00000473720 DALRD3Q5D0E6 543 aaKnown RBP15.93■□□□□ 0.14
SMPD4-217ENST00000473720 NPM2Q86SE8 214 aaKnown RBP15.93■□□□□ 0.14
SMPD4-217ENST00000473720 LAMB4A4D0S4 1761 aa15.92■□□□□ 0.14
SMPD4-217ENST00000473720 EIF5P55010 431 aaKnown RBP15.92■□□□□ 0.14
SMPD4-217ENST00000473720 TEX13AQ9BXU3 409 aaPredicted RBP15.92■□□□□ 0.14
SMPD4-217ENST00000473720 COL11A2P13942 1736 aaPredicted RBP15.91■□□□□ 0.14
SMPD4-217ENST00000473720 A0A087WZG4 1122 aa15.91■□□□□ 0.14
SMPD4-217ENST00000473720 TBC1D9BQ66K14 1250 aa15.91■□□□□ 0.14
SMPD4-217ENST00000473720 CCDC24Q8N4L8 307 aa15.91■□□□□ 0.14
SMPD4-217ENST00000473720 PRAMEF22A3QJZ6 481 aa15.9■□□□□ 0.14
SMPD4-217ENST00000473720 NPHP1O15259 732 aa15.9■□□□□ 0.14
SMPD4-217ENST00000473720 NEFMP07197 916 aa15.9■□□□□ 0.14
SMPD4-217ENST00000473720 C9orf131Q5VYM1 1079 aa15.9■□□□□ 0.14
SMPD4-217ENST00000473720 USP16Q9Y5T5 823 aa15.9■□□□□ 0.14
SMPD4-217ENST00000473720 TIAM2Q8IVF5 1701 aa15.9■□□□□ 0.14
SMPD4-217ENST00000473720 KDM3BQ7LBC6 1761 aa15.9■□□□□ 0.14
SMPD4-217ENST00000473720 NUP98P52948 1817 aa15.89■□□□□ 0.13
SMPD4-217ENST00000473720 CARMIL3Q8ND23 1372 aa15.89■□□□□ 0.13
SMPD4-217ENST00000473720 DICER1Q9UPY3 1922 aaKnown RBP15.89■□□□□ 0.13
SMPD4-217ENST00000473720 IL6STP40189 918 aaPredicted RBP15.88■□□□□ 0.13
SMPD4-217ENST00000473720 RASSF7Q02833 373 aa15.88■□□□□ 0.13
SMPD4-217ENST00000473720 C2CD5Q86YS7 1000 aa15.88■□□□□ 0.13
SMPD4-217ENST00000473720 RNF181Q9P0P0 153 aa15.88■□□□□ 0.13
SMPD4-217ENST00000473720 SLX4Q8IY92 1834 aa15.87■□□□□ 0.13
SMPD4-217ENST00000473720 FER1L6Q2WGJ9 1857 aa15.87■□□□□ 0.13
SMPD4-217ENST00000473720 KIF3CO14782 793 aa15.87■□□□□ 0.13
SMPD4-217ENST00000473720 DZIP3Q86Y13 1208 aaKnown RBP15.87■□□□□ 0.13
SMPD4-217ENST00000473720 MIS18AQ9NYP9 233 aa15.87■□□□□ 0.13
SMPD4-217ENST00000473720 ZNF219Q9P2Y4 722 aaPredicted RBP15.87■□□□□ 0.13
SMPD4-217ENST00000473720 ARFGEF2Q9Y6D5 1785 aa15.87■□□□□ 0.13
SMPD4-217ENST00000473720 TNRC6CQ9HCJ0 1690 aaKnown RBP15.86■□□□□ 0.13
SMPD4-217ENST00000473720 H0YIN7 160 aa15.86■□□□□ 0.13
SMPD4-217ENST00000473720 ZNF622Q969S3 477 aaKnown RBP eCLIP15.86■□□□□ 0.13
SMPD4-217ENST00000473720 NMRK2Q9NPI5 230 aa15.86■□□□□ 0.13
SMPD4-217ENST00000473720 SNRPA1P09661 255 aaKnown RBP15.85■□□□□ 0.13
SMPD4-217ENST00000473720 TTLL6Q8N841 843 aa15.85■□□□□ 0.13
SMPD4-217ENST00000473720 SETDB2Q96T68 719 aa15.85■□□□□ 0.13
SMPD4-217ENST00000473720 CAMTA2O94983 1202 aa15.84■□□□□ 0.13
SMPD4-217ENST00000473720 TAF7Q15545 349 aaPredicted RBP15.84■□□□□ 0.13
SMPD4-217ENST00000473720 HTATSF1O43719 755 aaKnown RBP15.83■□□□□ 0.12
SMPD4-217ENST00000473720 PRR5LQ6MZQ0 368 aa15.83■□□□□ 0.12
SMPD4-217ENST00000473720 NGEFQ8N5V2 710 aa15.83■□□□□ 0.12
SMPD4-217ENST00000473720 THUMPD2Q9BTF0 503 aaKnown RBP15.83■□□□□ 0.12
SMPD4-217ENST00000473720 MAPK8IP3Q9UPT6 1336 aa15.83■□□□□ 0.12
SMPD4-217ENST00000473720 FAM177BA6PVY3 158 aa15.82■□□□□ 0.12
SMPD4-217ENST00000473720 HSPA6P17066 643 aa15.82■□□□□ 0.12
SMPD4-217ENST00000473720 PDE6BP35913 854 aa15.82■□□□□ 0.12
SMPD4-217ENST00000473720 C16orf71Q8IYS4 520 aaPredicted RBP15.82■□□□□ 0.12
SMPD4-217ENST00000473720 CNBD1Q8NA66 436 aa15.82■□□□□ 0.12
SMPD4-217ENST00000473720 ST5P78524 1137 aa15.81■□□□□ 0.12
SMPD4-217ENST00000473720 DDX10Q13206 875 aaKnown RBP15.81■□□□□ 0.12
SMPD4-217ENST00000473720 NFE2L2Q16236 605 aa15.81■□□□□ 0.12
SMPD4-217ENST00000473720 WDR90Q96KV7 1748 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms