RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 CWF19L2Q2TBE0 894 aaKnown RBP7.79□□□□□ -1.16
CLK1-210ENST00000473565 GCC1Q96CN9 775 aa7.79□□□□□ -1.16
CLK1-210ENST00000473565 HSP90AB1P08238 724 aaKnown RBP7.79□□□□□ -1.16
CLK1-210ENST00000473565 SRCIN1Q9C0H9 1055 aa7.79□□□□□ -1.16
CLK1-210ENST00000473565 DCTPP1Q9H773 170 aa7.79□□□□□ -1.16
CLK1-210ENST00000473565 EXOC6BQ9Y2D4 811 aa7.79□□□□□ -1.16
CLK1-210ENST00000473565 MRC1P22897 1456 aa7.78□□□□□ -1.16
CLK1-210ENST00000473565 BEND3Q5T5X7 828 aa7.78□□□□□ -1.16
CLK1-210ENST00000473565 RPAP2Q8IXW5 612 aaPredicted RBP7.78□□□□□ -1.16
CLK1-210ENST00000473565 XAGE3Q8WTP9 111 aa7.78□□□□□ -1.16
CLK1-210ENST00000473565 FMNL2Q96PY5 1086 aa7.78□□□□□ -1.16
CLK1-210ENST00000473565 TOGARAM1Q9Y4F4 1720 aa7.78□□□□□ -1.16
CLK1-210ENST00000473565 COL14A1Q05707 1796 aaKnown RBP7.78□□□□□ -1.16
CLK1-210ENST00000473565 UBTFL1P0CB47 393 aaPredicted RBP7.78□□□□□ -1.16
CLK1-210ENST00000473565 COPS6Q7L5N1 327 aa7.78□□□□□ -1.16
CLK1-210ENST00000473565 DDX21Q9NR30 783 aaKnown RBP eCLIP7.78□□□□□ -1.16
CLK1-210ENST00000473565 COL22A1Q8NFW1 1626 aaPredicted RBP7.77□□□□□ -1.17
CLK1-210ENST00000473565 A0A0G2JS52 829 aa7.77□□□□□ -1.17
CLK1-210ENST00000473565 TOM1O60784 492 aa7.77□□□□□ -1.17
CLK1-210ENST00000473565 SNRPA1P09661 255 aaKnown RBP7.77□□□□□ -1.17
CLK1-210ENST00000473565 JARID2Q92833 1246 aaPredicted RBP7.77□□□□□ -1.17
CLK1-210ENST00000473565 GLI3P10071 1580 aa7.77□□□□□ -1.17
CLK1-210ENST00000473565 GNAI3P08754 354 aa7.77□□□□□ -1.17
CLK1-210ENST00000473565 SLC4A3P48751 1232 aa7.77□□□□□ -1.17
CLK1-210ENST00000473565 IPO9Q96P70 1041 aaKnown RBP7.77□□□□□ -1.17
CLK1-210ENST00000473565 HYPKQ9NX55 129 aa7.77□□□□□ -1.17
CLK1-210ENST00000473565 N4BP2Q86UW6 1770 aaPredicted RBP7.77□□□□□ -1.17
CLK1-210ENST00000473565 TSHZ3Q63HK5 1081 aa7.76□□□□□ -1.17
CLK1-210ENST00000473565 KSR2Q6VAB6 950 aa7.76□□□□□ -1.17
CLK1-210ENST00000473565 SYTL4Q96C24 671 aaPredicted RBP7.76□□□□□ -1.17
CLK1-210ENST00000473565 ASAP1Q9ULH1 1129 aa7.76□□□□□ -1.17
CLK1-210ENST00000473565 CCDC9Q9Y3X0 531 aaKnown RBP7.76□□□□□ -1.17
CLK1-210ENST00000473565 PXDNLA1KZ92 1463 aa7.76□□□□□ -1.17
CLK1-210ENST00000473565 PLCH1Q4KWH8 1693 aa7.76□□□□□ -1.17
CLK1-210ENST00000473565 A1BGP04217 495 aa7.76□□□□□ -1.17
CLK1-210ENST00000473565 NKX1-1Q15270 411 aaPredicted RBP7.76□□□□□ -1.17
CLK1-210ENST00000473565 RIC3Q7Z5B4 369 aa7.76□□□□□ -1.17
CLK1-210ENST00000473565 NBPF26B4DH59 902 aa7.76□□□□□ -1.17
CLK1-210ENST00000473565 ERVV-2B6SEH9 535 aa7.76□□□□□ -1.17
CLK1-210ENST00000473565 NBPF14Q5TI25 921 aa7.76□□□□□ -1.17
CLK1-210ENST00000473565 NBPF10Q6P3W6 841 aaKnown RBP7.76□□□□□ -1.17
CLK1-210ENST00000473565 PPP1R42Q7Z4L9 355 aa7.76□□□□□ -1.17
CLK1-210ENST00000473565 NBPF15Q8N660 670 aa7.76□□□□□ -1.17
CLK1-210ENST00000473565 TMOD3Q9NYL9 352 aa7.76□□□□□ -1.17
CLK1-210ENST00000473565 MFAP1P55081 439 aaKnown RBP7.75□□□□□ -1.17
CLK1-210ENST00000473565 ATP8B2P98198 1209 aa7.75□□□□□ -1.17
CLK1-210ENST00000473565 LRP10Q7Z4F1 713 aa7.75□□□□□ -1.17
CLK1-210ENST00000473565 PLEKHM2Q8IWE5 1019 aa7.75□□□□□ -1.17
CLK1-210ENST00000473565 PIGBQ92521 554 aa7.75□□□□□ -1.17
CLK1-210ENST00000473565 ZNF330Q9Y3S2 320 aaPredicted RBP7.75□□□□□ -1.17
CLK1-210ENST00000473565 DISP2A7MBM2 1401 aa7.75□□□□□ -1.17
CLK1-210ENST00000473565 ATP5J2-PTCD1G3V325 749 aa7.75□□□□□ -1.17
CLK1-210ENST00000473565 HMMRO75330 724 aa7.75□□□□□ -1.17
CLK1-210ENST00000473565 IGKV5-2P06315 115 aa7.75□□□□□ -1.17
CLK1-210ENST00000473565 GSPT1P15170 499 aaKnown RBP7.75□□□□□ -1.17
CLK1-210ENST00000473565 MYD88Q99836 296 aa7.75□□□□□ -1.17
CLK1-210ENST00000473565 C9orf78Q9NZ63 289 aaPredicted RBP7.75□□□□□ -1.17
CLK1-210ENST00000473565 KCPQ6ZWJ8 1503 aa7.75□□□□□ -1.17
CLK1-210ENST00000473565 SRGAP3O43295 1099 aa7.74□□□□□ -1.17
CLK1-210ENST00000473565 ZBTB47Q9UFB7 747 aaPredicted RBP7.74□□□□□ -1.17
CLK1-210ENST00000473565 EXOC5O00471 708 aa7.74□□□□□ -1.17
CLK1-210ENST00000473565 TTLL7Q6ZT98 887 aa7.74□□□□□ -1.17
CLK1-210ENST00000473565 C8orf37Q96NL8 207 aa7.74□□□□□ -1.17
CLK1-210ENST00000473565 RBM42Q9BTD8 480 aaKnown RBP7.74□□□□□ -1.17
CLK1-210ENST00000473565 CHMP4AQ9BY43 222 aa7.74□□□□□ -1.17
CLK1-210ENST00000473565 IL1RAPL2Q9NP60 686 aa7.74□□□□□ -1.17
CLK1-210ENST00000473565 NOP58Q9Y2X3 529 aaKnown RBP7.74□□□□□ -1.17
CLK1-210ENST00000473565 ITGB4P16144 1822 aa7.74□□□□□ -1.17
CLK1-210ENST00000473565 PLEKHG2Q9H7P9 1386 aa7.74□□□□□ -1.17
CLK1-210ENST00000473565 DDX58O95786 925 aaKnown RBP7.74□□□□□ -1.17
CLK1-210ENST00000473565 RTL5Q5HYW3 569 aaPredicted RBP7.74□□□□□ -1.17
CLK1-210ENST00000473565 ACSBG1Q96GR2 724 aa7.74□□□□□ -1.17
CLK1-210ENST00000473565 UBR2Q8IWV8 1755 aa7.74□□□□□ -1.17
CLK1-210ENST00000473565 SPATA31A1Q5TZJ5 1347 aa7.73□□□□□ -1.17
CLK1-210ENST00000473565 ANKRD13DQ6ZTN6 518 aa7.73□□□□□ -1.17
CLK1-210ENST00000473565 DNAJC10Q8IXB1 793 aa7.73□□□□□ -1.17
CLK1-210ENST00000473565 SUCLG2Q96I99 432 aa7.73□□□□□ -1.17
CLK1-210ENST00000473565 NRAPQ86VF7 1730 aa7.73□□□□□ -1.17
CLK1-210ENST00000473565 SURF6O75683 361 aaKnown RBP7.73□□□□□ -1.17
CLK1-210ENST00000473565 ERICH6Q7L0X2 663 aa7.73□□□□□ -1.17
CLK1-210ENST00000473565 LINS1Q8NG48 757 aa7.73□□□□□ -1.17
CLK1-210ENST00000473565 KAZALD1Q96I82 304 aa7.73□□□□□ -1.17
CLK1-210ENST00000473565 ZBTB3Q9H5J0 574 aa7.73□□□□□ -1.17
CLK1-210ENST00000473565 ATG3Q9NT62 314 aa7.73□□□□□ -1.17
CLK1-210ENST00000473565 PA2G4Q9UQ80 394 aaKnown RBP7.73□□□□□ -1.17
CLK1-210ENST00000473565 LAMB4A4D0S4 1761 aa7.73□□□□□ -1.17
CLK1-210ENST00000473565 PAPPAQ13219 1627 aa7.73□□□□□ -1.17
CLK1-210ENST00000473565 NEURL1BA8MQ27 555 aa7.73□□□□□ -1.17
CLK1-210ENST00000473565 GRM8O00222 908 aa7.73□□□□□ -1.17
CLK1-210ENST00000473565 PRIM1P49642 420 aaKnown RBP7.73□□□□□ -1.17
CLK1-210ENST00000473565 BMP2KLQ5H9B9 411 aa7.73□□□□□ -1.17
CLK1-210ENST00000473565 SSH3Q8TE77 659 aa7.73□□□□□ -1.17
CLK1-210ENST00000473565 ALDH1L1O75891 902 aa7.72□□□□□ -1.17
CLK1-210ENST00000473565 EPHA10Q5JZY3 1008 aa7.72□□□□□ -1.17
CLK1-210ENST00000473565 SLC4A9Q96Q91 983 aa7.72□□□□□ -1.17
CLK1-210ENST00000473565 ARXQ96QS3 562 aa7.72□□□□□ -1.17
CLK1-210ENST00000473565 METTL22Q9BUU2 404 aaPredicted RBP7.72□□□□□ -1.17
CLK1-210ENST00000473565 BICC1Q9H694 974 aaKnown RBP7.72□□□□□ -1.17
CLK1-210ENST00000473565 TNS2Q63HR2 1409 aa7.72□□□□□ -1.17
CLK1-210ENST00000473565 DDB1Q16531 1140 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms